ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11919277 | hESC derived neuromesodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◣ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMAD7
DPPA5
CER1
CDX2
METTL11B
ANKRD1
PPP1R16A
FOXH1
VENTX
UTF1
TMPRSS11E
URM1
HOPX
ZNF18
CD99L2
MTF2
REST
CLDN9
CLDN6
ATP1A4
CDH18
SHISA5
TREX1
SMARCA2
SFRP2
OR10AD1
TCF7L2
RPH3A
FAM174B
RNASE6
EDDM3B
GOLGA6D
DUSP29
GATA6
OR5K3
MBNL1
NAA30
HIGD1A
ACKR2
VOPP1
GBX2
ZNF600
POU5F1
SP5
GIMAP5
ID3
MICA
SCGB3A2
ARHGEF38
C9orf85
ABHD17B
CMC2
SHCBP1L
NTRK2
PDK1
LIN28B
WBP1L
FBXW11
GAD2
RASGRF2
LEFTY2
DEFB4A
DUSP6
HSCB
CHEK2
BTG2
MTRNR2L8
ABCB5
NLRP12
BDH1
SACS
PRKG1
MT1HL1
DHDDS
TERF1
SIPA1L2
ZPLD1
SH3GL1
CHAF1A
PSMD9
HPD
DEFB4B
DAOA
DUX4
GAST
MACROH2A1
ARID3B
SCN5A
MESP1
ETS1
SLC7A5
ENO1
FOXP4
FOXA2
ZBTB8OS
RBBP4
RIPK1
TRPM1
TCF7L1
KIAA0895
CST1
OR5AR1
KIF21A
APOBEC3F
ITPRID1
TENT5B
TNNI3K
SERINC5
MBNL2
WNT5B
MUC4
GNAI1
ENSA
LOC102724770
DGCR6
NES
CREB5
KIAA1522
COPZ1
CACHD1
UGP2
DDX46
FLVCR1
SPATA45
FZD8
KCNIP4
FGF2
BCOR
C10orf99
PRICKLE1
CCL26
EOMES
MFHAS1
GUCY2C
RNF24
CCDC169-SOHLH2
CCDC169
ZNF90
APLNR
ZNF436
FRAT2
IL34
CADPS
ZNF664-RFLNA
ZNF664
CCDC92
CD82
LRFN5
PRSS56
CHRND
AMN1
SOCS3
NAV2
LHPP
PPBP
PF4
PRODH2
TRAPPC8
SAMHD1
NRG1
GCNT2
PHLPP2
LINGO1
SEMA6D
HOXD11
HOXD13
HOXD12
SSB
PREP
EPHA4
TIAM1
AK4
EBF2
FANCF
ZSWIM3
ACOT8
ALDH3A2
GPR31
SLC16A12
BOD1L1
REV3L
ZNF649
MDK
CTNNA2
LRRTM1
LIPK
ZNF608
FAM83F
CCBE1
NEUROG3
GSN
KCNA4
GNAI2
PACSIN2
P2RY12
CRTAM
LOC105370980
DSP
PINK1
AGPAT3
PLPP2
PLAGL1
FAM151B
GGCX
ZFP36L2
PMEPA1
C1orf127
IL17RD
EXOC7
LGALS12
CBFA2T2
HBG2
HBG1
STN1
USP7
HESX1
LEMD2
INO80D
ZP2
FGFR2
TALDO1
DDX43
MDN1
CAV1
NR5A2
FOXB1
CCND3
TAF8
ARHGAP10
PHC1
IFNE
CCPG1
C15orf65
SUN5
BPIFB2
ZNF343
TMEM43
CHCHD4
WDR25
WARS1
GABRB3
DLX6
CHFR
SMIM32
PIPOX
NKIRAS2
DNAJC7
DCLK1
RMND5B
GOLGA6B
ENPEP
FAM120B
DLL1
B3GALT5
MYSM1
TMEM63A
LEFTY1
TEKT3
MTHFD1
LRRC10B
CCDC9
PNRC1
MSX2
CRISPLD1
PDGFA
PREX2
MFSD4B
EFNB2
ITGB5
AGO1
OPN5
CRYGB
CCDC85A
ACTN4
HOXB3
HOXB4
C1orf100
FBP1
TMEM70
LY96
MYC
RAB11FIP1
SRRM4
TMEM225
TDGF1
HGC6.3
TUBB2A
SRCIN1
DMXL1
F11
GLYATL1B
LRRC70
SLC46A1
NFE2
TFAP2A
CST5
CA2
CEP152
FBXO40
CFAP410
ZNF281
LRRN3
IER5L
RASA1
PSMA1
AGFG2
LCN1
BCL2L1
PITX2
STON1-GTF2A1L
RBM20
DEFB132
MRS2
TMCC1
PIM2
ZNF486
CNPY1
LRAT
PPEF2
CLIP2
LOC107986453
TPGS1
COMMD7
LYPD6B
TFPI
NFU1
SMN2
SMN1
CNOT11
CDKN1A
GPRC5B
UNC5A
TNFRSF9
SESN3
PLSCR4
RNF43
WASHC3
GOLGA6A
GOLGA6C
TACC2
HOXB1
KBTBD8
ANK2
PKIG
SERINC3
NKX1-2
DHX32
MAGEA11
TBC1D23
RPS13
MRPL20
ANKRD10
GDF3
BTBD10
MAD1L1
TPCN2
KHDRBS1
RNFT1
DACT1
VAMP8
VAMP5
SLC22A23
PALLD
KLF6
KRT18
DNMBP
SLC39A8
TTC13
ARAP3
CDX1
DKK4
PLA2G2A
C5orf63
RANBP6
PYGM
LRRC2
SGPP2
PSMG3
FMNL2
SNRPN
ZNF16
SMAD3
GRAMD2A
OR8H1
OR5T1
SPIRE1
RNGTT
TRIM2
DMTN
FGF17
SCARB1
ZNF503
EXT1
PAK1
SLAMF1
DNTT
DDX3X
MUC1
OR7D2
CSAD
ZNF740
PLAAT4
PLAAT3
CSK
CCDC93
SLC35A2
ZCCHC3
C20orf96
TNFSF8
FAM222B
SCAF4
STEAP3
NBPF20
DMRTB1
NRARP
NANOG
RNF220
TBC1D16
SEPTIN9
FAM153B
HSD17B4
ZNF121
CHI3L1
MYBPH
TLE3
TRPM2
PCSK1
VANGL1
TDRD7
DACH2
LONRF3
RAPGEF2
CTBP2
PLP1
STIM1
ST18
NIN
SOX6
CCN2
IL22RA2
PDHB
SULT1C4
FZR1
SPART
GTF3C4
DDX31
SHANK2
CARHSP1
CERS4
RCN1
MAGEB2
ZNF577
RNASET2
ST3GAL6
CSF2RB
NADK
SALL3
SMYD2
SULF1
HAS3
SOX2
PPP1R16B
SIN3A
TMPO
ZEB2
MVB12A
BST2
ERICH2
ZNF391
PHETA2
NAGA
ZNF483
SULT6B1
CEBPZOS
HERC2
S100A7
SEPTIN5
C16orf78
L1TD1
HERC3
IFITM1
IFITM2
ETS2
IFITM3
VANGL2
GPR19
RHBDF1
MPG
FAM227A
CBY1
ID1
SPDYA
NMNAT2
OBI1
KIFC3
ODF2
BUB1
UHRF1BP1L
ANKRD34B
MCF2L2
PCNX2
SLC66A2
HSBP1L1
RNF144B
FLRT3
STRA6
FAM110D
ACSS3
METTL24
AP3B2
LSM6
EIF4A2
ADGRL3
GTF2I
FAM227B
AKAP13
LIN28A
ZNF296
GEMIN7
KDM2B
SPIN1
INSM1
MPZL2
TBX3
ZNF202
DNASE1
ARHGAP40
PTBP2
LRRN1
RFX8
MRPS15
KLHL7
SUCLA2
CRYL1
RIF1
DPPA2
FGF1
DPH6
NCDN
KIAA0319L
MSL2
DDX59
MTRNR2L1
SASH1
GCNT1
SPRED2
SLC2A14
FAM24B
NBPF12
PIM1
GATA4
GPR179
SGK1
PRKX
SYT16
CACNA2D1
MUC3A
PSEN2
FZD10
HOXD1
TSEN15
COLGALT2
GABRQ
TPST2
DAGLB
TFE3
ZSCAN2
KDELR1
GRIN2D
MS4A4A
REX1BD
ART1
LRRTM3
LAPTM4B
FRG2C
CAPRIN1
AEBP2
FOXD1
ROR1
IFRD1
IGSF21
PRAC2
PRAC1
HOXB13
CHD7
ZNF536
FEM1B
BRINP1
VSNL1
FAM200B
TIMP4
CCAR2
C8orf58
TCAF1
IKZF5
ACADSB
TCHP
ABR
MNX1
ZNF814
INO80C
ARFGEF1
WNT3
FRG2
PRODH
LOC102724788
SAV1
GADD45G
NXPH2
CR1L
ADGRF5
HGD
OCLN
HLCS
CARMIL1
ARID2
ZFP64
AHCYL2
CD9
SRSF4
SYT6
ENKUR
FSTL5
ALDH1A2
YWHAQ
WDHD1
SOCS4
DOK7
GSTT2B
GSTT2
DDT
PLEKHG5
RBP1
LRMDA
SOX5
RIMKLB
GPR39
GMCL2
PPP1R18
NRM
FAM25A
CUX2
ADA2
ISOC2
FOXJ3
CFAP298-TCP10L
CFAP298
TMPRSS15
RBPMS
LZTS1
ZBTB40
LHX4
XIRP2
CCL20
KIFBP
FEZF2
ZNF781
DTNA
CKAP5
CORO1C
HIP1
KNG1
GSAP
RNF182
APOBEC3D
APOBEC3C
AUH
PLA2R1
TM9SF1
TOP1
TSSK4
DKK1
PCDHB9
PCDHB16
PCDHB8
PCDHB7
ZYG11A
RTL9
CELF4
OLFML3
FZD5
GJA10
MLLT6
KCNMB4
ADGRL2
MBNL3
LMNA
MEX3A
CYP2S1
PHC2
NOXRED1
COBL
NAA50
ATP6V1A
SAMD5
HOXA1
CHN2
CPVL
XCL1
PKDCC
C22orf39
LIMCH1
STMN1
ARMC12
PITPNM2
ZDHHC14
PHF19
MDFIC
LIMS1
CFLAR
PROCR
SNURF
HDAC9
PES1
TCN2
SEMA3A
FZD2
SET
PCDHGC5
PCDHGC4
PCDHGC3
H3C8
H2BC10
MED12
IL2RG
SLC2A11
DERL3
ZNF705B
SNAPC3
SOX14
ZNF572
OPTC
MSX1
ST6GAL1
SMPD1
CDC42EP3
ACVR1
MX1
ZBTB45
TRIM28
ATG9B
ABCB8
SLC6A7
KNDC1
CRYBB1
ZC3H11A
ZBED6
CRYBA4
LDB2
TGIF2-RAB5IF
TGIF2
KAZN
TNFRSF19
LPCAT1
STAM2
LFNG
SALL4
PBX2
GPSM3
UBAP2
ZBTB38
MT1X
MT1H
MT1G
CLEC7A
CALM2
TAF4B
ILDR1
HPGDS
TPCN1
KDM3A
TKT
ZNF705G
OLFML2A
NR6A1
PGAP6
CYP11A1
POSTN
WDFY2
TTYH1
LRATD2
MCM6
SAMD3
GALNT8
ZC3HAV1L
PSME3IP1
RSPRY1
GJA1
IGDCC3
CPLX2
MTM1
DISP3
ABCC2
DST
ZIC2
BCL2L14
ZCCHC14
RFFL
MYLK4
VCAN
EGFLAM
ADCY5
SLC7A1
VASP
PPM1N
MSR1
CCN3
ATXN7L1
INTS10
SEC14L1
DMRT1
CLSTN1
OCIAD2
PGPEP1
CRLF2
LAX1
SPRY4
EPHB4
SLC12A9
SC5D
SORBS2
AADACL3
LAMP5
FRA10AC1
PDE4C
KMT2B
UNC13B
MOG
EPB41L2
ASMT
TEAD4
SIX1
ROR2
RUNX1T1
PHLDB2
CNN3
DENR
HAPLN1
IDH2
TENM4
AKIRIN1
GRIP1
ZSCAN10
BIN2
PTX3
SSTR2
DTX2
GORASP2
DPPA4
ALPL
TCL1B
WFDC8
ONECUT2
BRINP2
ASTN1
KRT6A
FANCA
SPIRE2
KDR
FOXP1
PDE1B
GABBR1
ZFAND3
NDUFS5
HROB
TJP2
RYR2
ATF4
MIEF1
OTX1
UGT2B4
ZNF43
TRPM3
FBXL14
TSGA10IP
GREB1
PPP1R1B
ETV1
FAM180A
WDR36
NODAL
NOD1
PPP1R3B
MEIG1
DCLRE1C
GPC6
CLEC6A
EMC8
COX4I1
TRIM24
RAI14
FAT3
CGNL1
RIN3
MAD2L2
DRAXIN
LRGUK
ITGB1
S100A11
CELF3
RIIAD1
ETV4
NRXN1
HEY2
RUNX1
ASXL3
LGR6
SRCAP
LOC730183
NUDT4
KLF3
RNASE10
FOXI1
TRIP11
GSX2
ANXA2
SPAG9
LHFPL5
CLPS
RBM47
C7
ZP4
PTCH2
RPGRIP1
RAB7B
BRDT
SNX30
SPARCL1
MMS19
UBTD1
YARS1
S100PBP
DUSP12
MYCL
HNRNPA3
C6orf132
UNKL
CDH6
UHRF1
ARRDC5
RAPH1
SPIC
GUCA1A
FHDC1
CNGB3
GUCA1ANB
SPO11
VRTN
DDR1
ADAR
SPATA12
TMEM104
NAT9
CDA
MAST1
RTBDN
KLF7
PDCL
CDYL
LRIG1
MPZ
SDHC
CFAP20
TRIM39-RPP21
TRIM39
BCL9L
KMT2A
GDF11
TEAD1
RNASE9
SACM1L
APOBEC3G
ZSWIM4
MTHFD1L
SOAT1
ECHDC1
KRTAP10-3
SORBS3
CRYBG2
RCOR1
ABCG2
IFIT1B
IFIT1
PRRT1B
GAS1
MPP1
DEFB110
WNT8A
HELZ
P2RY14
ZNF335
HHIP
NDUFAB1
PDE4D
CBR4
MAP4K1
EIF3K
LSR
HEATR4
MAPK1IP1L