ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852814 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◣ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
LIFR
BTBD11
KRT31
LGALS8
PTMA
ANKRD35
PPP1R2
FAM227A
CBY1
KIAA2012
CELF3
RIIAD1
GABPB2
STC1
SRP68
ALDH1A1
MTF2
VWCE
BCL9
NTN5
NOTCH1
EPYC
APOD
USP3
LFNG
NAV2
ARID2
GEMIN4
NDUFB5
MRPL47
CDX2
MATR3
MED25
FUZ
PRSS23
PYM1
DGKA
RGS2
UGT1A6
EPHX3
ANKHD1-EIF4EBP3
ANKHD1
SERINC5
RPGRIP1
LINGO4
STK31
ZSCAN2
ATXN7
RPTN
SLC20A2
LMO3
EPHX1
CTNNA1
LRRTM2
MPC1
SMARCA2
PRR15
TTC39C
GGH
USP35
KCTD21
FOXP1
GRK6
TMPRSS15
GALNT10
EIF3J
ANGPT1
NKD2
PIPOX
FGFR2
C1QTNF7
KRTAP19-3
KRTAP19-2
KRTAP19-1
CDH12
IQCH
AAGAB
KRTAP8-1
TJP2
ANKRD6
TAGLN2
NPIPA1
LRRC72
HDAC4
HMGB1
CLDN11
SLC12A7
MANSC4
KLHL42
VAV3
SLC17A8
IFRD1
RLBP1
SEM1
ITGB8
SH3GL3
CLEC4F
TMEM17
ZNF750
CYP1A1
CYTH1
SNAPC3
NPIPA8
NPIPA7
ABCB10
CEP85L
LINGO1
PLEKHG1
SLC2A11
DERL3
SLCO5A1
KRT86
TPRG1
LSM5
AVL9
ETV3
CLEC9A
FGF12
LRP12
LIMK2
TLX3
TLCD4
TLCD4-RWDD3
DDX17
RETNLB
ANKRD10
RORC
C2CD4D
TARS3
SLC2A8
MAPRE3
NTF3
PLPP2
ODC1
HAUS6
EHD4
HGS
ARL16
ETV1
TMCC1
SIPA1L2
ANKRD44
GCNT1
RSPH4A
ID3
TES
COL14A1
RASAL2
TFEB
PGC
ZDHHC3
EXOSC7
ARIH1
KCNA6
PER2
POLI
AMN1
ADCY10
SECISBP2
EML2
BCL2L1
H3C6
H2BC8
H2AC8
CPLX2
H1-3
SEMA4D
HAO2
LYPLAL1
HOXA9
HOXA10
HOXA7
PGRMC2
MFGE8
ADAMTS17
ITGB3
MLLT11
CDC42SE1
C1orf56
SOX14
WFDC13
WFDC10B
AP1M1
KMT2B
COA8
BAG5
SLC26A9
PLA1A
UNK
H3-3B
CADPS
PHF5A
ACO2
LCA5
CLOCK
NMNAT2
CEMIP2
ESYT3
DUX4
UGT1A4
RNF217
UGT1A5
SMAD3
KRTAP3-2
KRTAP3-1
KLK12
H1-7
WSB2
TGFBI
BAHCC1
FBXL19
ZNF775
MYC
FMN1
APP
CUEDC1
PPFIBP1
EIF2B2
GLI2
CCPG1
C15orf65
AVEN
CDC27
CLIP4
CAST
ERCC4
INSIG1
TRIB3
HEBP2
TNS3
NUP160
SINHCAF
TMEM68
TGS1
CHSY1
TUBB2B
CSTB
RRP1
H3C15
H3C14
SH3BP4
MANBAL
H4C15
H4C14
CCDC57
CCDC3
TRIP11
GRAMD4
CCL24
KLHDC8A
MAST1
RTBDN
DPYSL3
YEATS2
EIF4A3
NARF
CYBC1
TSKU
NADK
NUP153
ESRRA
CATSPERZ
TOX
RYK
LAMC1
MARCKS
PRDX1
CLRN3
UACA
CLUAP1
C16orf90
MSX2
C3orf20
TRPC3
ANXA3
HDAC9
WFDC8
DYRK4
EPAS1
MSANTD4
PMEPA1
ERG
KIAA0040
ZNF335
SYNE2
CHD1L
PRKAB2
HLF
FGD4
HAUS5
SRRD
HPS4
MAST4
KDM2A
ARHGAP24
MAD2L1BP
GTPBP2
GTF3C3
C2orf66
LOC100506422
ZFC3H1
THAP2
CCT2
LMNA
AUH
ETV6
SDK1
RFLNA
PPARGC1A
CHRM3
VGF
NAT16
IL21
CYREN
ZNF444
ONECUT2
AKIRIN2
CHST6
TBX4
CCDC174
SLC33A1
ACTN4
SNCA
CTSK
RNF20
KRT23
PTGR1
NRCAM
GNL2
ESRP1
ZSCAN10
TMTC4
PLK2
ROCK2
SEPTIN9
C6orf132
GOLPH3L
MROH1
TLE1
ATP8B1
KDM3A
CCT7
PTCH1
VOPP1
TNFSF15
NEDD9
MUS81
CFL1
ZNF428
SRRM5
PLN
CRLS1
ZKSCAN1
RFX5
MTUS1
MAP3K9
DISC1
MFSD4B
SHC3
UNKL
HNRNPLL
ECT2
ID2
NDUFS5
HRH3
BORCS6
PPME1
C2CD3
GPR171
SPRY4
LRATD2
TIGD6
HMGXB3
ZNRF3
ANAPC4
ANKRD33B
HTRA1
RNF43
RAB23
AKAP1
CYP24A1
FRA10AC1
TRIM48
ZNF195
NACAD
MRPL36
NDUFS6
WIF1
ENTPD7
KIZ
TBL1XR1
ITGB4
SPEG
ICMT
HES3
HMGN1
ZNF687
EGFLAM
VTI1B
POLB
ZMAT4
DCPS
HCRTR2
PCED1B
AMIGO2
CEP68
SIX2
KIF13A
CDC42SE2
KCNN2
DNAJC21
BRIX1
NRP2
KLF6
SOX8
LMF1
HOXB9
CDH18
CEP20
EXOSC2
USP39
C2orf68
TPD52L1
REG1A
FAM20C
ZNF608
FURIN
OR1K1
FIGLA
CAV2
FOXP2
ATP8A2
RIN2
ATP6V0D2
ATXN1
LCE3B
LCE3A
C1orf100
SLC39A8
ASPSCR1
NOTUM
SH2B2
LRP1B
IL31RA
CSK
MEX3D
LTBP1
NDE1
MARF1
PI4KB
GRXCR2
DSP
UBTD2
CGN
PLCH1
ZBTB6
RC3H2
TRIB1
CIT
STON1-GTF2A1L
STON1
TTPA
PDZRN3
ZBTB45
TRIM28
AGPS
LTK
TAS2R50
CLCF1
PDP1
PLA2G4B
JMJD7-PLA2G4B
JMJD7
HERC3
COX20
SDC1
ZNF84
POU3F2
RFX8
BCL2L11
DUSP12
KNTC1
PDIK1L
CYTH2
ADD2
BEST1
EIF4EBP1
FTH1
RSF1
AAMDC
ZFP69B
PGK1
C9orf135
UCP2
NUCKS1
MACROH2A1
OAZ2
PSMB7
SRI
PDIA6
AKAP6
ARFGEF1
DCSTAMP
CEMIP
CRTAP
VCAM1
NPY4R2
NPY4R
TPST2
TIAL1
GOLGB1
XRCC5
DDAH1
TNFAIP2
SYBU
DPP3
ST6GAL1
FIGNL1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
FGF1
SLC25A36
MPZ
SDHC
CPA5
POU2F3
SRGAP1
ACTR2
PLOD2
ACVR1B
ETV4
CPT1A
KCNF1
CYB5A
LGALSL
CXCL5
ELF1
UTP25
WBP4
TRAK2
STRADB
POGZ
RPS11
RPL13A
CHN2
PIF1
CPVL
CDK5R1
NCF2
RNASET2
GADD45G
ZDHHC14
TLR4
PCTP
SLC7A1
STXBP6
STRIP2
HHIPL2
SHF
F11R
SNX27
PHIP
SNRPN
SNURF
CAPRIN1
DST
MTHFD2
SLC25A25
TMEM132A
S1PR3
QKI
MBLAC1
C9orf47
ADH5
TMEM211
CRISPLD1
LIMCH1
PIK3R3
ZNF106
SNAP23
TLE3
ARNT
LMCD1
H3C8
H2BC10
H4C8
TRIB2
FOXJ3
FNBP1L
LAP3
RHOJ
SEMA5A
ARL10
TRPM1
CTSV
IGF1
S100A10
TMEM128
HSPA1B
HSPA1L
HSPA1A
SNTB2
PDIA4
IGFL4
CCND3
TAF8
TENT5A
PGLYRP1
ATP13A3
CDKN2B
IL17RD
MAML2
SC5D
LAMP1
FBXO48
APLF
KRT77
STX6
DMRT3
ZNF304
KANSL1L
SPATA12
HACL1
BTD
DNAI2
MDM4
MIOS
ZSWIM7
TTC19
DOCK8
OR52N1
CYP4Z1
PYGB
C1GALT1
SEC31B
SCN1A
SPRED2
ZBTB40
WDR3
GDAP2
CADM1
TM4SF20
MYEOV
ATP10B
SLAMF8
LAMTOR1
ANAPC15
PCDHB9
PCDHB16
PCDHB8
PCDHB7
TLN2
IFNA2
CDKAL1
JUP
CEP63
ANAPC13
MANSC1
BORCS5
PHB2
NID1
RAP2B
ZNF736
TNRC18
LOC100129484
COL4A2-AS2
TRMT2A
RANBP1
OR2H2
ANKK1
EMP2
ACSL6
C2CD5
MRO
SLC30A8
CORO7-PAM16
CORO7
PSMG2
ERV3-1-ZNF117
ERV3-1
ZNF117
CEP76
DNAJB2
SEMA6C
PADI1
KPRP
ITPRIP
HMOX1
CLIP1
CNIH4
NAA40
PTPRO
AKR1C2
KLF7
TCF12
DLX5
POLR2M
RGS20
SMIM35
TMPRSS4
ALDH1B1
SHOX2
RSRC1
FGF3
CORO1C
MRLN
CITED2
FKBP9
LMNTD1
ASB5
MCCC1
SLC25A11
RNF167
PFN1
GP1BA
GATA3
SDHD
TMCC3
SLC25A27
CYP39A1
SLC10A7
RAET1L
GSN
EMSY
VANGL2
NEK6
CATSPER3
CNTN1
TMSB15B
EFNA4
ILF3
AGTPBP1
EFNA3
OR10S1
CDC42EP3
TTI2
NPTX2
CHMP4C
TENT5B
RAI14
TMEM88B
ANKRD65
OAZ3
RPA3
ICOS
LCE2D
UBR2
AGPAT3
SH3KBP1
IBTK
RAB12
POC1A
AKNAD1
UCK2
PCYOX1
TIA1
FGF19
UNC93B1
ALDH3B1
RCC2
FANCA
SV2C
SELENBP1
SYT2
FOXJ1
SHROOM3
LINS1
ASB7
GSPT1
NTRK2
PIMREG
AIPL1
HES1
ST7
MTURN
ADRA2C
CPT1B
CHKB
OR2T1
ZNF184
RPIA
CACHD1
CHD6
LNX1
TSGA10IP
USP54
CEP164
MNAT1
MYOZ1
SIX4
TWIST2
SH3D19
SHQ1
ZNF704
GPC1
TK2
PSEN2
BBS7
TNRC6B
ARHGAP5
PRKX
SERTAD4
FGF18
MID1
EIF4A2
NEFH
EMP1
UBOX5
FASTKD5
AMELX
KCNH8
SEC24B
SYNE3
KLF5
H2AC19
H2AC18
RBM20
ZDHHC5
RPL27
IFI35
CLP1
OTUD7B
ZNF292
ANP32E
MUC15
FAM83A
KRT74
ZSWIM3
ACOT8
VASH2
HSF2
FANCF
NR2E1
HCN4
OR5AP2
GSAP
ARID5A
DRD4
BHLHE40
HSPB3
SCT
CDHR5
OR10H1
SYNCRIP
ADRM1
TUBA1C
DNMT3A
ETS2
PRDM10
VDAC2
CALM3
PTP4A3
BRD4
TRIM61
ZNF395
RRBP1
MCM7
AP4M1
CDIN1
SLC16A5
HSF1
BOP1
SST
LOXL4
AFAP1
SPHK1
KLHL24
SPDYE14
SPDYE10P
NFIX
LOC389199
LDB1
ADAM19
NIPSNAP1
CBFA2T2
ABLIM1
MFSD6
LHX5
ARHGAP8
GRAMD2A
ST8SIA1
C11orf91
METRNL
SMCO1
GBX2
TBC1D14
WASF1
CDC40
DENND4A
PTGES2
CCT5
RCN1
TRIM13
UPF1
NDUFS8
ZNF346
SF3A2
PLEKHJ1
KDM5B
TCIRG1
PRR23D2
PRR23D1
CCDC186
PRUNE1
MINDY1
TDRD1
CD59
CXCL13
PIN4
IFT80
FILIP1L
MIDEAS
SFPQ
TPM1
RNF187
ZNF680
SMC4
LMO4
MYPN
RABGAP1L
CTTNBP2NL
FMNL2
GFRA3
GAD2
PCBP1
EAPP
ANK3
LOC389831
DEFB110
TNFRSF11B
COLEC10
CHRNA9
FANCI
OTULINL
TCF4
ANXA2
OGA
CPSF4L
ESR1
AKAP9
IP6K2
PTPN3
TBC1D31
USPL1
LY6G6F-LY6G6D
LY6G6F
MPIG6B
LY6G6C
CHST12
MS4A2
LY6G6D
CLK3
SYT7
EDN3
MOB3A
IZUMO4
PYGO2
PBXIP1
LOC101928120
MRPL42
C18orf21
OPN3
CHML
PAK6
THEMIS
SLC22A16
NBPF26
EYA1
G3BP1
CSRNP2
NSA2
GFM2
BAIAP2
MT1X
SPRING1
RNFT2
BNIP5
QSOX2
HUNK
COL6A5
INSM1
ZSCAN9
ZBTB2
CCDC80
LYRM1
DCUN1D3
PHKB
ITFG1
POFUT1
PLAGL2
PANK1
PATL1
SGPP2
KRT8
INTS9
HMBOX1
PKNOX2