ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286344 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◣ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TMPRSS11E
NRARP
ZNF483
NR5A2
SOX2
SMARCA2
REST
NTRK2
TERF1
DPPA5
SERINC5
PIPOX
GOLGA6D
CADPS
METTL11B
VCAN
TCF7L1
DNMT3B
APOBEC3F
DUX4
MAMDC2
MUC4
ZSWIM3
ACOT8
CDX2
TMEM63A
LEFTY1
FAM222B
SMAD7
ZSCAN2
FGF1
PHC1
SLC7A5
PLAGL1
FAM174B
CACHD1
SACS
ETS1
HESX1
LEFTY2
SOX6
LZTS1
ARHGEF38
NES
SLTM
MTF2
NAA50
ATP6V1A
RASGRF2
BCOR
FAM227A
CBY1
DUSP6
SRRM4
NRG1
MFSD4B
ANKRD1
PRSS48
SFRP2
TENM4
SHC1
FLAD1
CKS1B
TGIF2-RAB5IF
TGIF2
RNF220
BDH1
NANOG
TNNI3K
CD82
ZBTB8OS
RBBP4
POU5F1
DAGLB
DIDO1
GID8
SSB
GIMAP5
GAD2
FLVCR1
SPATA45
ZNF608
URM1
ATG10
NFE2L3
SLC46A1
TMEM70
LY96
FOXP4
GOLGA6C
SGK1
PRICKLE1
HOXB1
GLYATL1B
PSMD9
HPD
DNMBP
RPGRIP1
SAMHD1
SCGB3A2
CD99L2
LDB2
DEFB113
DEFB114
LRRC10B
TENT5B
NFE2L1
RIPK1
LRRC70
TARS1
RMND5B
FZR1
CLEC5A
DMXL1
ZNF18
VENTX
UTF1
FRG2C
ICMT
HES3
SHCBP1L
DDX46
PIM2
MTHFD1L
PHETA2
NAGA
DHDDS
APOBEC3D
APOBEC3C
AGO1
SMPD1
NDUFS5
LRRN3
ZNF343
LRRTM4
TRMT10C
PAK1
NDUFA4L2
GOLGA6B
RNASE9
IFRD1
OBI1
HDAC9
ZFHX3
NAV2
SALL4
TIMP4
SLC5A9
HMGB1
EBF2
SDK1
E2F7
ZBTB40
PTMA
CELF3
RIIAD1
FZD8
ATP1A4
RPH3A
DUSP29
PSORS1C2
CER1
ID3
SLA2
FOXI3
PHF5A
ACO2
RTP4
KIF21A
CD200
SOCS3
CYP2S1
SORBS2
DDX43
MAST1
RTBDN
FAM227B
MID1
SPRED2
OR5AR1
SALL3
COL17A1
FAM180A
GSX2
GOLGA6A
WDFY1
PPBP
PF4
ALDH1A2
SMCO1
FRG2
CBFA2T2
ZIC4
BRINP2
ASTN1
ZIC1
ZNF398
TSKS
AP2A1
ZNF532
SUCO
CLDN9
CLDN6
ANP32A
SLC2A14
KCNMB4
MTRNR2L8
GDF11
KIFBP
CSGALNACT1
TMEM30A
LRRN1
RNASE6
EDDM3B
AJAP1
IL34
COMMD7
OR6A2
BOD1L1
HES5
PANK4
ARID2
FOXA2
SNRPN
PPP1R16B
NMNAT3
CAV3
PMEPA1
KAZN
CANT1
KDR
GATA3
GPR21
LFNG
EFNB2
LOC102724770
DGCR6
BUB1
FGF2
DDX17
LHPP
CHMP7
SDF2L1
PQBP1
TIMM17B
MTRNR2L1
GLI2
NLRP12
ANKRD10
CDC42EP3
SGMS2
MED25
FUZ
LIPK
SYNDIG1
ITGB5
GAS1
VOPP1
ESR1
PNRC1
TDGF1
LRRC2
ZYG11A
PCBP1
DDX3X
FGD3
TRIM24
C9orf85
ABHD17B
PDZRN4
MUC1
OLFML3
LMCD1
ZNF770
MYSM1
FOXD3
C1orf127
TJP3
PIP5K1C
MAGEB2
SNURF
CHFR
ZNF674
CREB5
LARP1B
LANCL3
ADGRG7
BTG2
PLPP2
RNASET2
TKT
SH3GL3
KLHL7
ITPRID1
TRAPPC8
TRIML2
GADD45G
LRFN5
ZCCHC3
C20orf96
ARHGAP42
RAPGEF1
FOXP1
PCNX2
VCPKMT
GAST
CPA2
TFAP2A
NDUFB5
MRPL47
PPP1R16A
FOXH1
CRTAM
FSTL4
MFHAS1
CITED2
TALDO1
POSTN
SDCBP
SAMD5
PBX2
GPSM3
CCBE1
WDR49
TFE3
GNAI2
PRPS1
AKR1D1
OR5K3
ZNF775
GABRB3
ACVR1
RAB4B
MIA
TUBB2A
KANK1
ZNF781
ARSL
RAPGEF5
ART1
BEND3
FAM131B
PLEKHG5
EXOC7
MRPL20
PPAT
PAICS
WFDC8
DNTT
CARS1
MICA
PYGM
MST1L
FHDC1
CDC14B
UGP2
ONECUT2
EXD2
DNAJC25-GNG10
DNAJC25
GRK6
ART3
MAD2L2
DRAXIN
SEPTIN5
TMEM47
EXOSC9
SMAGP
LINGO1
CRH
HOPX
MACROH2A1
ABCC2
SYTL2
TNIP1
MED12
IL2RG
ENSA
ARL15
FBP1
KNDC1
WEE1
IL17RD
RAB17
FAM81B
PXMP4
DYSF
SH3GL1
CHAF1A
AASS
AKIRIN2
PDE1B
MMP10
MORF4L2
FAM120B
LIMCH1
DLL1
WNT5B
TPCN2
GCNT2
DACH2
ATP8A2
ACOXL
REV3L
TIAM1
PGBD5
MCHR1
RASA1
FAR2
HSCB
CHEK2
TACC2
AHCYL2
APELA
AGK
SCN5A
RGSL1
ZFC3H1
THAP2
AGPAT3
RPS24
PGAP3
ERBB2
SCAF4
TNRC18
LOC100129484
PLPP3
CHCHD3
NFYC
PITX2
SMC6
GEN1
RBP3
PRKG1
ABCB5
ARAP3
ASXL3
USP7
NUAK1
ABCA4
CDK6
NADK
H3C15
H3C14
PDCL
C1orf100
GCSAM
H2AC19
H2AC18
SNX19
PAG1
ADAMTS10
EOMES
FAM24B
TMEFF1
GJA10
DEFB4B
GALNT18
ADAMTS1
ZNF831
FAM200B
PGPEP1
HGS
ARL16
DGLUCY
SMIM32
TMPO
PEAK1
HMG20A
SEPTIN9
DOK7
PLSCR4
GPR85
GCNT1
HLA-A
SLC38A3
CLCF1
EXT1
PRAC2
PRAC1
HOXB13
SHROOM3
ZNF600
ZCCHC12
FBXW11
ISOC2
RNF24
PSMG3
SNX16
LHFPL4
MOV10
FZD2
SYN3
INSM1
PRMT2
CTSF
BCL2L1
ESRP1
KCNJ1
ACSL6
PARP1
CCT2
HIP1R
GRIA3
IDO2
TNRC6A
GAREM1
TES
ALS2
PTBP2
DOCK5
KCNN2
EYA1
KANSL1L
LHX2
COL12A1
CSRP2
FHIT
FBXO38
UNC13B
SLC36A2
SINHCAF
LMX1A
SHISA5
TREX1
CSAD
ZNF740
PRKAG2
FTCDNL1
FAM136A
GABRR2
NXN
SYDE2
PREX2
TJP2
KLF7
CAPZB
TEAD4
GDPD5
CELF4
NOTCH1
CAPN13
PISD
TUBB
MDC1
CACNA2D1
FUS
C7orf57
HOXA1
SUN3
XCL1
HOXA2
FIBCD1
SHANK2
KDELR1
GRIN2D
TCL1B
GRID2
KLHL31
GPRC5B
DPH6
MUC3A
HK2
UQCRH
LRRC41
ETV1
SMN2
SMN1
FZD5
CNOT11
TLE1
WASF1
CDC40
RIF1
SIN3A
MDN1
TMC5
GJC1
WDR36
DHX8
LNX1
GPC6
COL6A1
CRLF2
MSI1
AK4
TRPC4AP
LPCAT4
FZD10
GLRB
CBX2
GJA1
ATP6V1G1
STMN1
GATA6
GSG1
FZD7
ISL1
SOX4
BIN2
ETS2
HRG
LONRF3
TCEAL3
SCARB1
VIM
GABBR1
ZNF367
MKRN1
ZBTB45
TRIM28
KCNIP4
ISL2
ZAP70
PTX3
RBM3
LBP
MED4
TRIM13
CAPZA2
SYNPO2
BCL2L11
LHFPL6
P2RY12
NELFCD
GRIN3A
AGFG2
PPP3CC
NRROS
RYR2
AKIRIN1
UBTD2
CAV1
ADA2
NKIRAS2
DNAJC7
VTA1
NMBR
TAS2R46
TNC
MRO
FAT3
SERPINA1
MGAT4C
CLDN34
NXPH2
LRRTM3
NUP160
ANKRD40
LUC7L3
ACSBG1
CDH18
RTN4
ASIP
CCDC27
PRDM14
MAST4
MARCKS
TRIM71
ESM1
SOX5
PADI2
PITPNM2
KLF3
TRAPPC3
MAP7D1
TCF4
HBG2
HBG1
CST1
GCG
RIC8B
SPARC
KBTBD8
DACT1
SH3BP4
NEBL
GABRQ
PSIP1
C9orf135
ZEB2
UNK
H3-3B
MYT1
TTYH1
PARP16
PPP1R1B
SOX21
ID1
CARHSP1
GPATCH8
SENP2
MEIS3
TGIF1
PALLD
PDK1
NPAS3
MEX3D
MRS2
KDM2B
LEPROT
LEPR
GPR31
TBC1D17
PNKP
AKT1S1
SGPP2
PDIA4
COL6A2
GPR19
ITGB8
GSN
UGT1A6
ZNF436
KRT31
TRIM2
GBX2
GLRA1
FGFR2
FGD4
ETV4
KIF5C
NRCAM
NCDN
KIAA0319L
CYP1A1
COL23A1
RCN1
GNAI1
STON1-GTF2A1L
USP44
IER5L
FIGNL2
TEKT3
CNPY1
LCA5
LIN28B
MTRNR2L2
MSH3
DHFR
KMT2B
IQCH
AAGAB
SYBU
TESK2
PALM2AKAP2
APBA2
CYTH2
PUF60
MCCC1
PHLPP2
TMCC1
ATF4
PER2
FBXL19
FRAT2
MMACHC
CCDC163
BFSP1
STN1
AMN1
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
FBXO40
PYGB
HOXD11
MIEF1
WDR55
DND1
ECE1
SNAPC3
HOXD13
HOXD12
CCDC169-SOHLH2
CCDC169
GSAP
SLC35A5
CRYGB
ATG3
JPT1
WBP1L
PDPN
SPRY4
RFX4
SMAD3
ITGB3
MBNL2
DDR1
PRR15
THOC3
CEP41
CAPRIN1
DCAF4L1
SOX14
SLC30A9
SPIC
ECT2
ST18
DHX32
TOMM40
SYT2
VWCE
EEF1A1
CD24
UQCRHL
MLEC
CDYL
SASH1
LMNA
EAPP
PIN4
CA6
TCF7L2
HMOX1
BICD1
SEMA6D
TPH2
GDF3
MTM1
ANAPC4
ZNF335
MANBAL
KIAA0895
PPP1R2
LIMK2
WDFY2
IGFL3
SMYD2
LIN28A
ARIH1
L1TD1
SRCIN1
FGF12
CNN3
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
FEZF2
FOXD1
KDM2A
TIAM2
WDHD1
SOCS4
SULT6B1
CEBPZOS
MOG
SRSF7
KLF5
ATXN3
PHRF1
TRPM1
PPEF2
STK31
IFT80
KIF6
TBC1D16
ZNF304
CHN2
PSME3IP1
DENR
CUEDC1
DST
TMEM167B
RGS3
CCDC130
SLC39A8
CRYAA2
CRYAA
UBQLN4
LAMTOR2
TPST2
RBFOX2
ABO
ANKRD6
KLHL6
RASAL2
NDST1
PYCR2
LRIG1
PRRC2B
KLHL3
UGT1A7
PGK1
DSP
SPIN1
SLC20A2
ERG
CAMTA1
PLEKHG1
LYPD6B
CCAR2
C8orf58
PPP2R3A
C10orf95
INO80D
DUSP12
ANK2
GTF2I
ADAR
PTAR1
NRBP2
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
GMCL2
PHAX
ALDH7A1
CHRNA1
ZNF34
CCDC200
ANKRD35
CAPN3
STRA6
OAZ2
SLC66A2
HSBP1L1
SHF
SOCS5
TBC1D14
EMSY
TTC13
MT1HL1
CHD6
UFD1
CDC45
KDM3A
SLC34A1
PFN3
TNFSF8
LEMD2
FYN
NEUROG1
EPHB3
NDUFV1
NUAK2
ZNF536
PACSIN2
NEDD9
ROR1
C1QTNF7
PHC2
HES1
ZNF296
GEMIN7
CCN2
RBM22
ABL2
RSPRY1
EPB41L1
VANGL2
CSK
NECTIN1
MYCL
ARID3B
SIX2
CTBP2
FXYD7
ZNF875
ADGRL2
ZNF195
ESR2
TAF13
CFLAR
TMUB2
URGCP
RARB
AASDH
KIAA2012
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
OSBPL1A
ERVH48-1
ANXA2
ST3GAL6
ATXN7
FAM219A
DNAI1
FAM107A
CCN3
CXADR
SLC33A1
HHIP
ETV6
TSPAN13
FOXO6
CCL26
CERCAM
MVB12A