ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286342 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◣ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NR5A2
NRARP
KIF5C
DUX4
REST
VENTX
UTF1
MTRNR2L1
MAMDC2
SOX2
CADPS
GIMAP5
PSORS1C2
SMARCA2
FAM227A
CBY1
POU5F1
LZTS1
FRG2C
NTRK2
CDX2
PLAGL1
TMPRSS11E
SERINC5
DNMT3B
RTP4
TCF7L1
HOXB1
TMEM63A
LEFTY1
METTL11B
SFRP2
GAST
PQBP1
TIMM17B
MAST1
RTBDN
FAM222B
RNF220
FRG2
SCN5A
DPPA5
DUSP6
SSB
ZBTB8OS
RBBP4
MTRNR2L2
MSH3
DHFR
NES
LOC102724770
DGCR6
DAGLB
CLEC5A
SACS
WNT5B
FAM227B
LEFTY2
SRRM4
ALDH1A2
MTRNR2L8
ESR1
BCOR
PIPOX
DDX3X
NAA50
ATP6V1A
KCNMB4
GAD2
CCDC200
ECE1
ARHGEF38
ZNF483
FOXI3
APOBEC3F
MUC4
SOCS3
DNMBP
TSKS
AP2A1
APOBEC3D
APOBEC3C
AGO1
TENT5B
NANOG
CDX1
SHCBP1L
SLC2A14
AJAP1
MTF2
SDF2L1
DYSF
CANT1
TJP3
PIP5K1C
SLC7A5
ATP1A4
VOPP1
MED12
IL2RG
TGIF2-RAB5IF
TGIF2
PDE1B
CD99L2
SNRPN
E2F7
TERF1
ICMT
HES3
KCNA3
GOLGA6D
TNNI3K
ISOC2
C9orf85
NMNAT3
OR6A2
RPGRIP1
IL34
PHETA2
NAGA
TNRC18
LOC100129484
IFRD1
MFSD4B
EBF2
DDX43
ASIP
ASXL3
SLC46A1
HES5
PANK4
NDUFA4L2
PLEKHG5
TUBB2A
GOLGA6A
ARHGAP42
VCAN
BRINP2
ASTN1
GLRB
TCL1B
KIF21A
OR5AR1
ETS1
LANCL3
BDH1
FZD2
OSBPL2
TRIM56
C1R
TNIP1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
OSBPL8
GPRC5B
RMND5B
NUAK1
FZD8
FOXD3
FAM136A
SGK1
RASGRF2
ZNF496
CACHD1
KIFBP
PRSS48
SHC1
FLAD1
CKS1B
CYP2S1
GOLGA6B
SMAD7
CLDN9
CLDN6
CELF3
RIIAD1
TIMP4
STAU2
PPP1R1B
GDF10
EOMES
HESX1
PSMD9
HPD
DDX17
SDCBP
PHC1
DDX46
PRMT2
PIM2
FAM180A
ZEB2
CRLF2
GSX2
NDUFS5
SP5
GLYATL1B
MTHFD1L
GPR21
URM1
HGS
ARL16
COL6A2
PTMA
MAGED2
ITIH6
DUSP29
FGF2
MFHAS1
PLA2R1
RNASET2
RNASE6
EDDM3B
NAV2
SOX21
SOX6
LFNG
ANKRD1
LRRC10B
NDUFB5
MRPL47
MUC1
ID3
HMGB1
ZSCAN2
NRG1
SPRED2
HDAC9
RIPK1
LRRN1
FLVCR1
COL17A1
LRRN3
TARS1
ZNF608
FGF1
SPATA45
PPBP
PF4
GDF11
ID1
CD82
ITGB8
PRICKLE1
ANKRD10
LMCD1
RPH3A
OBI1
SAMHD1
TDGF1
MED25
FUZ
BTG2
ZSWIM3
ACOT8
FAM174B
LRRC2
SMCO1
GRK6
ZFHX3
SLTM
NOTCH1
DMXL1
GSN
KLHL7
FBXW11
ABHD17B
SHISA5
PLPP2
TREX1
UGT1A6
TALDO1
ARID2
ZNF436
KRT31
SMPD1
SCGB3A2
ETV1
TRIM2
PMEPA1
KDR
CBFA2T2
GBX2
HSCB
CHEK2
ZNF775
GLRA1
PPP1R16A
ZNF398
MRPL20
FGFR2
NADK
BCL2L1
FGD3
FGD4
NFE2L3
FOXH1
GAS1
ART1
HOPX
ITPRID1
TRAPPC8
ETV4
GLI2
ENSA
WFDC8
NRCAM
ZNF343
NCDN
KIAA0319L
CYP1A1
PPP1R16B
LDB2
COL23A1
FZR1
GNAI2
PHF5A
ACO2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
LHPP
CER1
GADD45G
USP44
ATP8A2
RPS24
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
C1orf127
TRIM24
FAM120B
CSAD
CDC14B
LCA5
LIN28B
MYSM1
LY96
PRKG1
ZNF740
KMT2B
FBP1
LIMCH1
PBX2
GPSM3
IQCH
AAGAB
SYBU
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
PALM2AKAP2
SNURF
APBA2
CYTH2
PUF60
MKRN1
ZBTB40
GCNT2
ESRP1
MCCC1
PHLPP2
PSMG3
FOXP1
SOX5
TMCC1
ATF4
PER2
FBXL19
LINGO1
FRAT2
RIF1
SLA2
CDC42EP3
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
MRS2
BFSP1
STN1
NFE2L1
SGMS2
SAMD5
AMN1
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
CRH
MIEF1
WDR55
DND1
RASA1
ZFC3H1
THAP2
MDN1
NLRP12
SNAPC3
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
RFX4
SMAD3
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
DDR1
ITGB5
PRR15
THOC3
CEP41
CAPRIN1
MAD2L2
TUBB
MDC1
LARP1B
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
DHX32
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
EEF1A1
CD24
DGLUCY
BEND3
DPH6
UQCRHL
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
EAPP
MORF4L2
PIN4
CA6
KNDC1
C1orf100
TCF7L2
AASS
CPA2
HMOX1
BICD1
SEMA6D
TPH2
CCBE1
ONECUT2
KCNN2
SCARB1
WEE1
GDF3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
KIAA0895
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LRRTM4
LIN28A
ARIH1
SIN3A
L1TD1
WDFY1
NRROS
SMIM32
TTYH1
CARHSP1
NEBL
SRCIN1
FGF12
CNN3
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FEZF2
FOXD1
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
OLFML3
PARP16
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
SLC36A2
PGPEP1
RTN4
KLF5
ATXN3
GCSAM
PHRF1
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
SERPINA1
ZNF781
IFT80
KIF6
TBC1D16
ZNF304
CHN2
BOD1L1
PSME3IP1
DENR
CUEDC1
PCNX2
DST
TMEM167B
RGS3
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
SENP2
CRYAA2
CRYAA
UBQLN4
LAMTOR2
TPST2
USP7
RBFOX2
PAK1
ABO
ANKRD6
KLHL6
RASAL2
NDST1
PYCR2
SYN3
WDR49
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
SEPTIN9
PGK1
DSP
SPIN1
SLC20A2
CACNA2D1
AHCYL2
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
TNC
SMN2
SMN1
SINHCAF
DOK7
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
ADAR
PTAR1
NRBP2
UNK
H3-3B
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
ANKRD35
CAPN3
STRA6
PITPNM2
OAZ2
CITED2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
LEMD2
FYN
TMEM47
NEUROG1
EPHB3
DACT1
NDUFV1
NUAK2
ZNF536
MUC3A
PACSIN2
PDIA4
NEDD9
ROR1
C1QTNF7
PHC2
HES1
APELA
FAM24B
ZNF296
GEMIN7
CCN2
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
NECTIN1
MYCL
ARID3B
SIX2
FZD5
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ADGRL2
ZNF195
REV3L
ESR2
TAF13
CFLAR
TMUB2
URGCP
FUS
TIAM1
INSM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
TCF4
TRIM28
OSBPL1A
ERVH48-1
ANXA2
ST3GAL6
EYA1
DIDO1
ATXN7
CST1
FAM219A
DNAI1
FAM107A
CCN3
CXADR
SLC33A1
HHIP
ETV6
MARCKS
TSPAN13
FOXO6
CCL26
CERCAM
GID8
MVB12A
ZBTB18
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
NDUFAB1
CLPB
SMIM14
TSPAN14
PRKAG2
INTS9
HMBOX1
KANSL1L
SLC25A36
TUT1
MTA2
ZNF649
KCNIP4
MSANTD4
ZNF565
NPSR1
SYNDIG1
ZNF674
DPPA4
AGK
SDK1
SLFN12
RAB15
ERMN
TEAD1
TCP1
MRPL18
LBP
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PDK1
NMNAT2
BCL9
SOX13
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
TMEM132B
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
DISP3
TNS3
PRTG
URGCP-MRPS24
SLC23A2
TFE3
TET3
STOX2
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
SHANK2
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
NEUROG3
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2
PSEN2
TJAP1
MBD4
IFT122
AFAP1
MTHFD1
MMP10
UHRF1BP1L
LRAT
NUP160
SLC2A8
TLE1
COL4A2-AS2
BST2
KRTAP3-2
DUSP1
RASSF8
NBPF20
SPHK1
ENKUR
WDR36
RNASE9
CEBPZ
ESX1
POLDIP3
ZSCAN9
BIN2
FAM20A
PCYOX1
SLC16A13
SLC16A11
RAPGEF5
FRY
ZP2
ABCC10
PCDHB5
FAM153B
TNRC6A
PKIG
FMN1
OR2T1
OPN5
KLF6
RIC8B
SORT1
IFNE
SPATA22
WDR74
STX5
G3BP1
ABLIM1
HNRNPA3
RABGAP1L
MEX3A
CFAP20
ADGRD1
S100A16
ZNF428
SRRM5
LRRC47
ZMAT2
PARN
BFAR
MBNL1
RNF43
BORCS6
MEIS2
HSF2
SFRP1
MPP2
LGALS8
CRISPLD1
MBNL3
SELPLG
FBXL14
SSUH2
INO80C
MEF2C
TAF12
PDGFA
LRTM1
DTNA
GALNT18
MAP6
ACSL1
NKIRAS2
TNFRSF6B
PDE4D
PIK3R3
SLC2A11
OGA
CSF2RB
NXPH2
NEK6
YIPF4
PREP
CNGA1
TBC1D1
PDHA2
SPIRE1
TRIT1
KRTAP3-1
ZNF90
NXPH1
STMN1
RUNX1T1
PLPP3
ABCC2
CPT1A
MSI1
HSPH1
LIFR
REEP6
PCSK4
PAX6