ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047416 | hESC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◣ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

BFSP1
TRIM62
DICER1
KLHL7
FIGNL2
SACS
UPB1
OSBPL1A
PDHA2
PDPN
WFDC8
LRRC10B
RASA3
PGPEP1
CFAP221
APBA2
ATP1A4
UGT1A1
MROH2A
CAMTA1
CACNA1S
ASCL5
DDR1
NCOA3
LZTS1
SOCS3
FAM181A
PLEKHB1
TMEM212
PRR5L
C1orf127
COMMD9
ZFHX3
POSTN
GLRA1
TMPRSS9
IFRD1
ATP2C2
METTL11B
ZNF436
IL7R
NOTCH2
PDE4D
FAM219A
DNAI1
NES
CHD1
NRBF2
NWD1
NFE2L1
SEC14L1
DTNA
TP53RK
CEP112
MTRNR2L8
CUBN
MUC1
P4HA3
TRAF6
RAG1
LPCAT2
TPST2
GFRA1
COL17A1
CTNND2
GPC4
FGF12
TP53INP1
ADAMTS18
PLAGL1
DNMT3B
TNP2
PRM3
PRM2
PRM1
CHN2
LIMCH1
SYNDIG1
CCDC81
MLEC
GOSR2
GAST
PAFAH2
PRTG
ZNF57
DKK3
WNT2B
LIX1L
PKNOX2
DTHD1
TTYH1
LRTM1
ADAMTS14
CTBP2
PTTG1IP
CD82
PCYT1B
S100B
AHNAK
ITPRIP
PATE1
ABAT
SLC35D1
AGO1
ZBTB18
TCOF1
KIF6
NRCAM
FAM120B
CA6
ASXL3
ANO3
FRMPD2
NKX2-2
GAS1
TCF20
KCNJ10
TTF1
CFAP77
TOX3
DLL1
OPRD1
FZD9
IL36A
FAM107A
LCA5
TNNI3K
TAS2R60
ACVR1
LFNG
FZD3
FBXO16
LOC101929372
TTYH2
RPL38
SFRP1
PREP
ATP8B1
PTGS1
VEPH1
LOC645177
C12orf77
MTO1
CGAS
LOC645188
CRYBA1
CDYL
RGS12
SPIRE1
PSMG2
RNF175
TRNP1
SMAD2
SSUH2
DHX9
VIM
SLC34A2
AKAP9
TBC1D14
ANXA3
HMGB1
ARHGEF4
PTK2
NUAK2
NOTCH2NLB
MTM1
TNC
PAX3
HDAC9
MLYCD
CP
TMPRSS7
BPNT2
USP44
TDGF1
LRRC2
KIAA2012
PDE4B
NUP214
MTF2
COL4A2-AS2
ARHGEF37
EGF
ZNF775
EPB41L2
LRRN1
JPT2
PLEKHG1
SPRYD4
MIP
MMRN1
SMPD1
APBB1
MPP1
TMEM167B
TAF13
DTX4
DNMBP
BCAR3
AHSP
NEK3
WNT5B
KIF21A
GAS2L3
MYO15A
GSN
LRRTM3
PHLPP2
RGS3
SOX21
UGT1A6
ZIC4
CDH5
PTPRD
OSBPL2
MOB1B
DGLUCY
MBIP
OCSTAMP
F7
NEDD4L
CSK
PSME3IP1
POLDIP3
LRP2
NPL
PTGS2
ETFB
ATXN7
PPP1R16B
PIPOX
NDUFS5
BIRC2
CRB2
ST18
FAM110D
CNKSR1
ZNF593
C1orf232
TFDP2
LCOR
PRTFDC1
BNC2
CEP85L
COL5A2
SLC7A8
LGI1
ADCYAP1R1
TRDMT1
MUC20
SPATC1L
PUF60
SCRIB
ADAM17
TCF4
MAP2
EMID1
GNAI1
FOXB1
SCARB1
POR
SLAIN1
DSCAML1
FXYD2
GBX2
RUNX1T1
ZNF474
CLIP1
CTIF
UQCRHL
PPM1L
FRY
THRB
DPYSL5
MEGF10
CYB5R2
C1QTNF2
KCTD6
NRIP2
CHD7
AP5S1
SAMD5
OR5AR1
SLC28A1
HK1
CD2
PBX2
GPSM3
PALM2AKAP2
NEDD9
STON1-GTF2A1L
MFSD5
CCAR2
C8orf58
ERN1
PATL2
MYCL
ZFAND6
SELPLG
RBFOX1
LIX1
PRKAG2
POU3F4
CX3CL1
LYSMD3
ICMT
HES3
PTDSS1
MTERF3
GXYLT2
RFX4
SPATA13
THEMIS
UNC93B1
ALDH3B1
AGMO
DUSP6
SALL2
DCT
MARK2
TAB2
SIK1B
SIK1
RNF165
BTBD11
RRAGD
ZNF385B
CIB4
VSTM2L
SPHK2
DBP
SORBS2
BAIAP2
C9orf153
DECR1
PHTF1
HNF1A
TMEM132B
PCDH18
MID1
CRISPLD1
FBXL14
SASH1
IGFBPL1
TMEM47
PRSS23
OXCT1
SOX6
STOX2
BTBD3
TIAM2
OR56B1
DHX32
LMCD1
RUFY3
FGD4
ZNF69
SLN
SLC45A3
RGS8
SLC38A8
PKIG
PREX2
ARHGAP24
TAGLN3
CNN3
TMEM229B
PLEKHH1
DLG2
TCF12
CRYAA2
CRYAA
PPP2R2B
PLK3
TCTEX1D4
BTBD19
STK31
DIMT1
IPO11
ARMC12
C1QTNF7
PRKCA
TRIM8
SLC10A2
CXADR
CSPG5
FTCDNL1
WDR49
KL
CCDC88C
CENPA
GPR183
MSH5
CLIC1
DDAH2
PAPLN
ACP6
ZNF423
CDC14B
ABHD12B
SPEM3
SPEM2
SPEM1
NUDT2
KIF24
FRRS1
SRP14
SERTAD2
PES1
TCN2
TMCC1
CCDC71
KLHDC8B
RARB
NDRG4
IGSF11
CPA4
LMNA
MEX3A
RFX3
EIF4G3
IGF2BP1
ARID5B
ZFC3H1
THAP2
FAM227A
CBY1
TPH2
SERPINA1
PURB
FAM102A
ONECUT1
ZBTB7C
CACHD1
GJA1
EFCC1
CFAP92
CROCC
MCF2L2
ZNF367
PEA15
CDON
SORT1
GPM6B
SLC4A8
URM1
SENP8
MYO9A
ZNF346
BCL9
RING1
SLC39A7
RXRB
HSD17B8
LHFPL2
ADA2
CNTN4
MTUS1
PRR16
FZD6
FGF13
SH3BP4
CNTFR
ETFDH
C4orf46
HGD
ATP1B4
PACRGL
ADGRL3
DNAI2
ITGB8
INPP4B
THSD7B
RPRM
PTPRJ
CELF2
TCP11
KIF26B
LOC102723899
TMPRSS5
SOX2
VXN
OCM
APPL2
ERBB4
OTOGL
OTX1
CPA5
PI15
CTPS2
C21orf62
SLC6A9
ANKRD6
ZNF254
PAM
FAM107B
GRK6
TPCN1
IQCD
FECH
ERICH6B
SPTLC3
PHAX
ALDH7A1
ATE1
DNAH1
ZBTB20
FUT5
C1orf189
ZEB2
ANKRD1
NSD2
LETM1
STX11
TRDN
TMSB10
MOCS3
DPM1
GSAP
GPR82
WBP1L
HPS1
ZHX3
ZNF304
ZSCAN10
RPL17-C18orf32
RPL17
LRIG3
PDLIM3
SREBF2
CXCL2
TRIM2
MAP1B
CXCR4
CNPY1
CFTR
INAFM2
MGAM
CHRNA1
LRRC53
NFASC
SRSF7
RASAL2
NOTCH3
MEF2C
B3GNTL1
TIAM1
LOC150051
KANK1
RERE
SETD5
NUFIP2
BMPR1B
BACH2
MGST1
PHC2
FOXP2
IFNA5
ENOX1
ID1
PCOLCE
MOSPD3
PRRC2B
EPB41L1
ADGRL2
LRRN3
DGAT2L6
PLEKHG3
TMEM260
NUAK1
FSIP1
KLHL6
ANK3
GHRH
CDIN1
PTH2R
RSPRY1
YWHAQ
ALLC
VPS37B
LRP1
LIMK2
TMEM139
CASP2
EBAG9
COX10
SCN5A
KCNN3
UFD1
CDC45
GNAI2
MAPK8
DERL1
PIK3C2G
FRS2
SYNGR4
PTPN3
ME3
IGFL3
C1QTNF5
MFRP
TSPAN13
C2orf80
NDUFB5
MRPL47
PHF5A
ACO2
CYP1A1
BMX
CCDC33
ZNF362
KDM3A
PDE1B
SLC1A2
TSPAN14
RGMA
STN1
SAXO1
RRAGA
GADD45G
CCN2
TBC1D30
PTPRZ1
GUCY1A1
PLXNA4
PLAAT2
ETV4
COL14A1
RASGRF1
GPR142
BTBD17
ARHGEF7
SPRED2
JAKMIP2
NADK2
CEP41
PIK3C2A
VAMP8
VAMP5
TNRC6B
HLTF
ANKRD40CL
STRA6
LLGL1
MYH7B
GSS
FRRS1L
G3BP1
ATOX1
FAM222A
SPATA22
KLF3
TMEM150C
CELF3
SAPCD1
MSI1
SERPINB12
MKRN3
FLVCR1
BCAT1
LDLRAD4
GAS8
DBNDD1
ALKBH5
SPSB4
NOSTRIN
SPATA2
DACT3
KRTAP19-3
KRTAP19-2
KRTAP19-1
SDCCAG8
CEP170
EGR3
CD24
ODF4
MRM3
GLOD4
ZCCHC3
C20orf96
PLEKHG4B
INVS
ERP44
FIGN
DCAF8L2
SLC6A1
CDK5RAP2
MTHFD2L
FZD2
PRND
NR2F1
PROC
EHF
GLCCI1
ZNF496
MAOA
YIPF3
POLR1C
LRRC73
TUB
ACSS1
TSPAN19
LRRIQ1
VMP1
PTRH2
GATM
SPATA5L1
CERCAM
NAV2
TOMM40
SYT2
CRABP1
RIPOR2
IKZF1
C1orf198
COA8
BAG5
AMMECR1L
PSD4
PTPRA
SLC3A2
NEK6
FOXP1
MMP10
CTNNA2
LRRTM1
FRZB
PRLR
CHI3L2
ZNF609
WDR74
STX5
CHST7
CLEC18A
BEND3
DOCK9
SFXN5
ID3
KLF5
TBXAS1
HIPK2
TEX2
PTPN18
IMP4
CCDC115
PLAC9
ARIH1
GABBR1
CLEC18B
GTDC1
XYLT1
ZNF195
GEMIN8
TNP1
KLHL38
KYNU
SEMA5B
WEE1
SLC29A2
RORA
TGIF1
OSBPL11
TECTB
VCPKMT
TOP2A
CCDC90B
N4BP3
EFNB2
NEUROG1
CEMIP2
PSMD14
ABCB4
MED25
FUZ
SLC34A1
PFN3
EDN2
URGCP
URGCP-MRPS24
FOCAD
GET3
PLEKHA1
ABCG1
LCP2
TNIK
FGD3
KDM2A
PCDH8
ANP32B
CDH17
PYGB
SPARC
DLGAP1
IGFBP2
LSM5
AVL9
UBE2Z
DDAH1
LOC728392
ZSCAN2
DPP4
NFATC2
PER2
TESC
CD2BP2
ABCA5
ADAM20
B3GALT5
MIB1
ELAPOR2
NKAIN4
CCT2
MAP2K5
FMN1
RAI14
GAA
AASDH
DDX17
PIK3R3
LOC389831
NAA50
ATP6V1A
RPH3A
ZSCAN18
RNF19A
PANK2
TUFT1
SHC3
CLEC19A
SMS
HMOX1
MBD4
IFT122
TUBB
MDC1
NR4A3
OLFM4
C22orf34
CARHSP1
CDK6
DOK5
SERINC2
IGDCC3
RIIAD1
ID4
SRP9
BMP7
HGC6.3
UNK
H3-3B
AKAP7
RSPH14
RAB36
C16orf96
ARHGEF26
MBP
ELOVL6
FBXO10
CIPC
PHYHIPL
SLC2A10
GZMK
CUL5
RNF43
ZCCHC8
SOWAHA
SHROOM1
ABCA1
PMEPA1
GRHL2
TAF12
CXXC4
LPAR1
IFIT3
HIP1R
CHD9
CLEC18C
PCDH11X
CAPRIN1
MYLK4
SALL3
NIN
RIPOR3
PTCHD4
CLEC3A
LRRC8B
KLHL36
FGF10
CLMP
HPCAL1
ARHGEF38
FAM193A
RBFOX2
VASH2
FGFRL1
PSRC1
SLC6A8
PNCK
FGFR3
DMBX1
MAPK10
XAF1
CDKN1A
CRYGD
ZFHX4
ADAM21
BBC3
SGCA
FMN2
DHRS12
NRXN1
ELMO1
TNMD
RGS20
BCL2L11
DMD
FLJ44635
SF3B5
MOB3B
KIF13B
CA14
ERMN
MAP3K7
PHKB
ITFG1
ECM1
RAB30
GAS7
HACL1
BTD
NSMCE1
SCGB3A2
COL11A1
RAB11FIP1
EAPP
ZFYVE1
JAG1
ADPGK
JAM3
TENM2
NNMT
GDPD2
GP2
ACTR3
BCAR1
CBFA2T2
CENPP
OR6C3
TOR1AIP2
CSRP2
FZD7
FOXI1
SLC16A13
SLC16A11
RHOJ
CTTNBP2NL
NR2F2
RDH12
RDH11
SMAD7
FILIP1L
HDAC4
CMSS1
DACT2
RTP4
AKAP6
VCAN
ADGRA1
ACOX3
TRMT44
ZNF608
APC2
FYN
SNRPN
PACSIN3
RGL1
TCIM
DCDC2C
MRPL33
MAST4
OR6C76
GALNT12
FRMD4A
GNAT2
AMPD2
ZNF292
GDPD5
CPE
PARP16
ME2
RASSF8
ABLIM1
NR3C1
PDE1A
SLC2A8
NOX4
STK32C
LRRC27
BCL2L1
YAP1