ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750797 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◣ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TNFRSF6B
FRG2C
NRARP
BTNL9
FRG2
RPEL1
DUX4
DRD4
FAM227A
CBY1
SPATC1L
TMEM242
MMP8
MTF2
COL23A1
MTRNR2L1
PIRT
TSPAN19
LRRIQ1
EEF1A1
SAGE1
CT45A10
TMEM217
TBC1D22B
RTRAF
GALR1
CYP4F11
PERM1
HGC6.3
SPATA33
SDHAF4
EPN1
TMTC3
CEP290
COX18
ATP5F1E
TFB1M
WASHC4
MUC1
TICAM2
FAM153B
C6orf89
PPIL1
THOC3
UBR2
NBPF1
FAM120B
SRBD1
RBM7
C11orf71
PPARD
FAM240C
EBAG9
SOX2
ZFAND3
CTBS
SNTB1
TSEN15
ARHGAP6
KIFAP3
BNIP5
MTMR2
ZNF322
SART1
ZSCAN9
E2F7
RAB18
SLC36A4
SCFD1
CNTN5
PPP1R12A
TMEM71
PHF20L1
MAST4
FRA10AC1
CMTR1
MOCS1
NUDT4
UTP23
GORAB
PARPBP
NUP37
RNLS
LIPJ
CHMP3
USP49
DYNC2H1
PHACTR2
RGS19
OPRL1
LKAAEAR1
HMGN3
E2F6
MTRR
FASTKD3
TES
SNRPB2
COL6A2
PROX2
IRF2BP2
ZNF518A
HFM1
LRRCC1
PDGFD
ME3
MAPK1IP1L
TMEM14B
POLR2J3
FILIP1L
MBIP
COL19A1
BPHL
WDR35
PAG1
CEP126
ANGPTL5
BAG2
JRKL
CCDC82
SH3TC2
AARS2
HDDC2
STARD4
COMMD8
OARD1
NFYA
DPYD
MUC20
RBBP8
TMED8
SAMD15
TFAP2A
TDP2
ACOT13
LMBRD1
EXOG
ZHX3
CBWD5
CBWD3
CBWD6
GPAM
TMEM260
GOLGA6L10
WDHD1
SOCS4
TDRD7
SSH2
EFCAB5
ARHGAP39
ZNF451
C2orf73
HEATR5B
GPATCH11
CCDC59
UTP20
CD83
SRPK1
HLA-DRB1
BTBD9
DYNLRB2
GLRA3
MTNR1A
INTU
PELO
ITGA1
SMIM14
HLA-A
FZD6
MYL12A
NBN
ZNF330
PTCD2
MRPS27
DYNC2I1
PHLDA1
VAPB
CXCL2
NPDC1
ENTPD2
ANKRD36B
RIOK1
CAGE1
EFHC1
LAMC2
TOMM34
STK4
PRKG2
ZNF165
OR1F12
MRE11
ANKRD49
EIF2AK3
ZNF76
INTS7
DTL
CGRRF1
TNFRSF11B
COLEC10
GTF2H1
SAYSD1
HPS5
DR1
SLC44A3
VRK2
ARL14EP
CAP2
RAD21
POLN
HAUS3
CCDC34
COQ2
SRP9
CTNNB1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
MCL1
CCDC15
KRTAP2-4
KRTAP2-3
PIK3R1
CYP2E1
HTR7
PGBD1
ZC2HC1C
ACYP1
HDGFL1
RNF150
TP53RK
C1orf105
MRPS18A
SLC13A3
PIGC
CEP55
DPH6
LYPLAL1
IP6K2
SESN3
CAST
TMX1
DDX10
NTS
PCDHGA1
TAF7
PIP4P2
RAD51AP2
KRTAP9-7
KRTAP4-4
KRTAP4-3
SELENOK
ACTR8
ABCD3
NUP133
CRYAA2
CRYAA
SEL1L
FER
MAP3K13
ATG14
RALGAPB
PRELID3B
DSCC1
CENPP
DEDD
NOL8
UBE2N
DDX60
APOBEC2
PELI2
WBP1L
TUT7
PTPRK
EHBP1
ZNF583
YTHDC2
MSANTD4
TBCA
SCO1
ADPRM
ZNF326
ZNF337
RFESD
FBXO4
ZNF557
RIC8B
ARHGAP24
UTS2B
CCDC50
LSM6
EIF5A2
FAM122A
FBXO34
MOCS2
SYS1
STIMATE-MUSTN1
STIMATE
CFAP299
OXNAD1
DPH3
KIAA1586
CD55
MRPS16
DNAJC9
ETAA1
CXCL3
MTCH1
DAAM2
ARG2
SECISBP2L
KRCC1
FAM135A
ANKRD20A1
ZBTB40
ZNF438
CARMIL1
TCAIM
ZSCAN16
BANK1
EDEM2
CNTRL
PAQR3
C5
LRRC37A3
L3HYPDH
JKAMP
ZC3H12C
ADRB2
TRIM68
WIPI1
LHX9
ZNF397
C1orf53
SLC25A3
MPHOSPH6
SPATA4
FAM76B
CEP57
PDXDC1
ADGRB3
SCAND1
RBM19
UTP15
ANKRA2
C4orf3
GABRB3
RGS2
LSM4
EDARADD
NIPSNAP3A
HSD17B7
RBM12
CPNE1
ERO1A
FOXP1
ECT2
TCP11
PRICKLE2
PTGS2
SMC3
CLEC12A
NUF2
APC
CFAP58
CCDC66
SLC25A32
DCAF13
GCH1
TCTE3
ERMARD
NAALAD2
IMMP1L
ELP4
PRPF38B
NET1
ANKRD60
SNAPC1
OR1J4
OR1J2
GNPTAB
WDPCP
ZSCAN31
C12orf73
MDH1
CA2
TDG
RGL1
MTHFD2L
NT5E
FDXACB1
C11orf1
ALG9
EEF1E1
MANBAL
SPTLC2
AKIRIN1
APPL2
ANKRD36C
NDFIP1
SMG5
GSTA4
C5orf51
TMEM79
FANCE
TOMM20L
GRPEL2
POLE4
TTC12
SUMF2
ARIH1
FGD6
VEZT
NTPCR
WDR77
ATP5PB
CETN3
RNF8
IL6ST
CPOX
CCDC6
DENR
SLC3A2
SPATA22
ASPA
SECISBP2
USP6NL
CKS2
IFT57
DTNB
ERO1B
CLGN
BBS10
BRAP
ACAD10
NELFCD
TBC1D19
MAP9
ACTA2
XRCC4
TMEM167A
MCM3
MAL2
MED13L
TIMM23
TEX10
RALGAPA2
SLC35B3
ISOC1
MYLIP
LONRF2
ZNF333
UROS
BCCIP
SAV1
SYNE2
CDC5L
CEP120
OXR1
FAM204A
LIMA1
SH3RF2
ACAT1
MND1
EREG
PLA2G6
H4C12
H2BC15
H2AC15
PTP4A1
ZNF25
FANK1
MFAP3
FAM114A2
CSRP2
RAD54B
ARHGAP19
TNFRSF21
CSDE1
SLC17A5
CREBZF
CLIP4
NEDD1
CEP295
MSRB2
PXT1
KCTD20
FAM8A1
FDX1
CXCL1
ZFPM2
PDRG1
EFCAB13
TFIP11
KDM3A
RBBP9
TMED7-TICAM2
TMED7
ACOX3
CUL5
HMGCS1
TTI1
RPRD1B
ANKRD46
CLTC
ZNF302
MAPKAP1
RHBDD1
IRS1
METTL15
KIF18A
ZNF215
OR2D3
PIGF
CRIPT
STAC
PRKD3
RASGRF2
EXT1
CHD6
RFX1
SDE2
EIF3C
MED17
LUZP1
CFL2
H2BC4
H2AC6
KIF3B
SAMD13
GNPNAT1
AARD
RAB33B
ZNF772
C12orf66
EIF3CL
CDC7
BIRC2
CPE
RABEP1
C6orf226
ARL4A
MAD2L1
UGGT2
RTCA
SMIM12
RFX4
TNC
PKIG
C5orf63
SERINC3
DERA
TMEM30A
PACRGL
MAML2
NME7
BLZF1
CCDC30
HELB
ANKRD28
CD109
NUDT4B
GMFB
LPCAT3
SEMA3C
RPP30
TTC29
CCDC39
ATOH7
RPF1
DAZ4
DAZ1
HYDIN
TBC1D7-LOC100130357
TBC1D7
MTPN
LUZP6
RABGGTB
CCNH
CHIC2
SPATA17
GPATCH2
MTX2
PTMA
AUH
CDK17
OTUD7B
MRPL33
TNPO1
CLASP2
SEMG1
RPL5
ZBTB17
ZNFX1
PCNX4
CIBAR1
NME6
ANXA4
AAK1
SEMG2
ATP6V1C1
CRYBG3
NECTIN4
NOTCH2
CR1L
CLDND1
STK38
MALT1
ACTRT3
ISCA1
MYNN
HSP90AB1
GPR15
POLR2K
CTR9
ARL6
FBXO43
PIGM
RAB32
TAF9
RAD17
AK6
NOTCH2NLB
TMEM17
ATP6V0A1
H4C2
H4C1
H3C1
H1-1
SUCLG1
ARMC4
RIPK2
PSMB8
CDC42BPA
HEATR5A
TANC2
UBE3B
C4orf19
UQCRFS1
ZNF543
TAP1
PSMB9
RAB23
RNF19A
MOV10
SLC35D1
RNF217
TUT4
RBMXL1
KYAT3
VPS8
PPFIA2
MED20
BYSL
DNAJC25-GNG10
DNAJC25
CTXN2
MYEF2
PPIP5K2
GIN1
SLU7
PTTG1
ENDOD1
TMEM38B
ANAPC10
ABCE1
ARFGEF2
TOMM6
PRICKLE4
FRS3
UBA6
CTNNBL1
GXYLT2
LEMD2
CHD1
PRR16
MRPL17
CHST10
FRMD6
ILVBL
GLTP
VAMP4
CCDC112
NT5DC3
ERGIC3
TRPC4AP
SUCO
PRPF39
CPD
SF1
GBP2
TGDS
GPR180
FAM13C
WDR27
ATRN
C6orf120
MRFAP1
COG6
EIF2AK2
TTC13
TMEM229B
NCOA3
PDP1
VSNL1
PLEKHH1
LYSMD3
DERL1
RFX3
ALS2
COL21A1
NCOA5
CYRIB
VPS37C
GOLIM4
ZNF124
LPAR1
ATL1
SHOC2
BBIP1
NAXE
GPATCH4
BIRC3
SGPL1
DYNLRB1
MTRF1L
MAP4K5
ABCF1
STK17B
CACHD1
KNTC1
DYNLL1
FABP7
FANCF
RPUSD4
FAM118B
MCOLN3
SMPDL3A
GRIA4
EXPH5
RNF182
MRPL2
KLC4
CUL7
KAT7
MSMO1
TTC17
RDH14
TMEM170B
STAMBPL1
ANKRD42
NHLRC1
C12orf45
KDM3B
SLC25A51
ETS1
MRS2
UNC13B
LOC389831
SFXN1
TNFAIP8
HARBI1
ATG13
ATXN1
RBM17
RPIA
NSRP1
TMEM123
GBE1
TXNDC12
BTF3L4
PPP1CC
CDC73
LGALS3
CHMP4C
F13A1
ANKRD31
PSTK
ACSS3
CEP135
YAP1
SMAD5
DELE1
SEC24D
STX12
ELMOD2
CENPE
C12orf50
C12orf29
FERMT2
OGFRL1
VAMP3
NFYB
ZNF596
UQCC2
SNTN
PAPSS1
NAA20
SLC8B1
CCDC130
SNX19
CCN3
ATP6V1G1
SACM1L
EXOC5
AP5M1
AGL
PRDM2
PHF3
SHQ1
ENTPD7
NUCKS1
XRN2
YTHDC1
EXOC2
GTF2IRD2B
H3C3
PAWR
H2BC3
TXNIP
SUCLG2
SRSF11
AKT3
ZNF445
HMGCLL1
TRIM32
ASTN2
ZNF266
TSHR
MEF2C
TRDMT1
PPME1
C2CD3
RAD18
ACYP2
MRPS30
CTNNA3
INTS12
GSTCD
RNF13
THUMPD2
ARHGAP5
STAM2
DLG1
PRDM1
CRB1
PPIC
ROCK2
POFUT1
PLAGL2
TTC14
FANCL
COL8A1
HSPA5
SLC35A3
CYB5R4
GDAP1
PPP1CB
LOC100996750
KRTAP4-7
LSM11
USP38
CFAP70
SNRPF
ASCC3
ZNF32
FBXW2
GMDS
SART3
ISCU
MMUT
CENPQ
MPZL3
RIPPLY2
LYRM4
FARS2
KIF5B
NDUFAF2
ERCC8
SPIN4
ZSCAN26
ZKSCAN4
NKAPL
MAK
NPFFR2
C14orf28
C7orf25
RASSF6
LRRK2
MICU2
HECTD1
GFRAL
VWDE
PLCXD3
DEFB112
AGBL4
MTRNR2L8
INTS9
HMBOX1
CCDC88A
ARF4
ZCCHC4
CTSC
H2BC17
H2AC17
APAF1
NUDCD1
RORB
CSNK1G3
H3C12
PEX3
ADAT2
EXOC6B
IKBIP
ERMAP
FAM149A
BOD1
BMT2
TET2
THAP9
SEC31A
PIH1D2
NKAPD1
TRIQK
TRPS1
BLMH
TM9SF3
SVBP
AK2
DNMBP
PTPN2
C2
CGGBP1
H1-7
PHF20
FAM83B
ZNF654
EIF2B2
EHMT2
HAPLN1
BRINP3
ZFYVE9
TDP1
EFCAB11
ZBTB12
DNAH14
USP2
EIF2D
ZNF700
CMTM6
RAB11FIP2
TAF11
ANKS1A
RNF180
UHMK1
PTGER2
WWP1
DEPTOR
OR2L13
OR2AJ1
DDX46
KRBA2
ANGEL1
LRRC74A
H4C9
H2BC11
H2AC11
ZNF391
COL14A1
LRRFIP2
CLK4
RAD54L
RPL26
RWDD1
CEP57L1
GPCPD1
SESN1
ZNF706
RAB38
MIPOL1
TFAM
DHRS4
ZDHHC13
GAGE2C
GAGE2B
GAGE2A
GAGE1
LAMTOR3
KTN1
ANKEF1
RIOX2
TMEM19
OR7C2
DUSP6
SORBS2
STX16
NKIRAS1
CCDC38