ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968912 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◣ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PLAGL1
MTF2
NRARP
IGFBP2
SACS
FAM227A
CBY1
DNMBP
ATP1A4
LRTM1
SOX21
PGK1
GXYLT2
LOC102724770
DGCR6
FOXB1
RBFOX1
CRYAA
CRYAA2
UNCX
CRYBG2
BFSP1
METTL11B
SCN5A
NES
PGPEP1
ADAMTS18
ART1
DICER1
MED25
FUZ
HDAC9
MUC20
CSPG5
EAPP
CRB2
ITPRIP
CAMTA1
DTX2
DUX4
PIK3C2A
PTPRZ1
DNMT3B
GAST
PTMA
ALDH2
SRRM4
TRDMT1
FAM222A
PARP16
SOCS3
TAF12
C1orf198
LFNG
WDR74
STX5
NRCAM
ME3
NDUFB5
MRPL47
OSBPL1A
KDM2B
CNPY1
NKX2-2
WEE1
PLEKHB1
CCDC71
KLHDC8B
MUC1
HMGB1
APBA2
NUAK2
PAFAH2
LRRN1
PTPRJ
SSUH2
ZNF496
NEDD9
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
CTHRC1
OSBPL2
TNP2
PRM3
PRM2
PRM1
DOP1B
TNRC18
LOC100129484
WNT2B
SUN5
BPIFB2
ID2
PARP2
ABCB4
RPGRIP1
VCAN
SIK1B
SIK1
DDX17
EFNA5
GFRA1
PIMREG
AIPL1
CEMIP2
PRTG
SIRT4
MTRNR2L8
LIMCH1
RING1
SLC39A7
RXRB
HSD17B8
CSTL1
CST11
MSI1
TUBB2A
NOTCH1
FAM181A
CNTFR
NSD2
LETM1
HIBCH
TRIM2
MTRNR2L2
MSH3
DHFR
CRABP1
NR5A2
TTYH1
TUBA1C
CYTH2
DDR1
MAST1
RTBDN
PREP
PHF5A
ACO2
URM1
ACVR1
MEGF10
PBX2
GPSM3
ARHGEF37
KLHL7
CAPRIN1
UPB1
RGS3
INSM1
TMEM107
LCOR
LMNA
MEX3A
PTPN6
C12orf57
EEF1A1
CP
VEPH1
FREM1
PIPOX
FAM107A
NR2F2
KDM2A
TMEM167B
TAF13
SCARB1
HMOX1
CD300LD
C17orf77
STN1
PLEKHG1
POLDIP3
TRNP1
ADGRL2
MS4A4A
GNAI2
ARRB1
ABAT
SOX2
IQCH
AAGAB
ANKRD6
RBM20
DLGAP1
KANK1
PKNOX2
CBFA2T2
TMEFF1
MPP1
CEP41
THEMIS
FAM219A
DNAI1
PRR5L
POMZP3
RPL17-C18orf32
RPL17
ADAMTSL1
ATP8B1
KIF2C
GCSAM
TMEM132B
LIX1L
CERCAM
FZD1
FRMPD2
ALLC
MAMDC2
ADAMTS14
VEZF1
PPP1R16B
IGFL3
ONECUT1
NR2E1
BBC3
DTX4
SYNGR4
TTI2
EMID1
C1orf127
FGF12
AFTPH
CCDC200
CTNND2
ONECUT2
MRM3
GLOD4
TCF7L2
GAS1
LGI1
TP53INP1
MYCL
FYN
BAHCC1
FBLN1
FRMD4A
MAP2
RGS8
ZBTB38
TTF1
CFAP77
CHN2
IGDCC3
SYT11
GON4L
SMARCA2
REST
CDX2
TMPRSS11E
NAV2
DPPA5
SMAD7
TERF1
SOX6
CADPS
ARHGEF38
FRG2C
ZNF483
ANKRD1
LRRC10B
MUC4
ID3
ZSCAN2
CACHD1
DUSP6
AGO1
ZBTB8OS
RBBP4
NRG1
SPRED2
NTRK2
TCF7L1
APOBEC3F
RMND5B
RIPK1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
COL17A1
VENTX
UTF1
SFRP2
LRRN3
TENT5B
BCOR
SERINC5
FAM222B
MTRNR2L1
TARS1
ZNF608
IFRD1
GIMAP5
FGF1
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
ID1
PHC1
CD82
SSB
ITGB8
FRG2
PRICKLE1
ANKRD10
LMCD1
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
TDGF1
MTHFD1L
KIF21A
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
LRRC2
SMCO1
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
GRK6
ZFHX3
SLTM
ETS1
DMXL1
GSN
FBXW11
ABHD17B
SHISA5
PLPP2
NANOG
TREX1
UGT1A6
TALDO1
TNNI3K
ARID2
GLYATL1B
ZNF436
KRT31
SMPD1
RNASET2
LZTS1
SCGB3A2
ETV1
MED12
IL2RG
HOXB1
HESX1
PMEPA1
KDR
CELF3
GBX2
RASGRF2
SLC7A5
HSCB
CHEK2
RIIAD1
ZNF775
GLRA1
PPP1R16A
ZNF398
MRPL20
FGFR2
NADK
BCL2L1
FGD3
FGD4
NFE2L3
FOXH1
DDX43
HOPX
PSMD9
HPD
ITPRID1
TRAPPC8
ETV4
GOLGA6B
KIF5C
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
ZNF343
NCDN
KIAA0319L
CYP1A1
LDB2
COL23A1
FZR1
GOLGA6A
LEFTY2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
LHPP
CER1
GADD45G
USP44
ATP8A2
RPS24
DAGLB
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
GPRC5B
TRIM24
GSX2
ICMT
HES3
FAM120B
CSAD
CDC14B
LCA5
LIN28B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
KMT2B
FBP1
IL34
SYBU
DDX46
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
PUF60
MKRN1
ZBTB40
CYP2S1
GCNT2
TMEM63A
ESRP1
MCCC1
PHLPP2
PSMG3
FOXP1
SOX5
TMCC1
ATF4
PER2
FBXL19
LINGO1
FRAT2
RIF1
SLA2
CDC42EP3
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
MRS2
NFE2L1
SGMS2
SAMD5
AMN1
SIPA1L2
TRIP4
PCLAF
SGPP2
ZEB2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
FZD2
CRH
HGS
ARL16
MIEF1
WDR55
DND1
RASA1
ECE1
ZFC3H1
THAP2
MDN1
NLRP12
SNAPC3
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
RFX4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
ITGB5
PRR15
THOC3
APOBEC3D
APOBEC3C
VOPP1
MAD2L2
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
CD24
ALDH1A2
EBF2
DGLUCY
DUSP29
BEND3
DPH6
UQCRHL
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
MORF4L2
PIN4
CA6
KNDC1
C1orf100
FAM180A
AASS
CPA2
BICD1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
KCNN2
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
KIAA0895
PPP1R2
LIMK2
TES
WDFY2
SMYD2
LRRTM4
LIN28A
ARIH1
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
CARHSP1
NEBL
SRCIN1
TIMP4
CNN3
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FEZF2
FOXD1
GABRQ
MAST4
AK4
TIAM2
TMPO
OLFML3
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
MOG
ZBTB45
SRSF7
SLC36A2
RTN4
KLF5
ATXN3
PHRF1
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
SERPINA1
ZNF781
IFT80
DDX3X
KIF6
TBC1D16
ZNF304
BOD1L1
PSME3IP1
DENR
CUEDC1
PCNX2
DST
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
SENP2
UBQLN4
LAMTOR2
TPST2
USP7
RBFOX2
SLC46A1
PAK1
ABO
KLHL6
RASAL2
NDST1
PYCR2
SYN3
WDR49
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
SEPTIN9
DSP
SPIN1
SLC20A2
CACNA2D1
AHCYL2
PXMP4
ERG
LYPD6B
TNC
SMN2
SMN1
SINHCAF
DOK7
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
ADAR
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
ANKRD35
CAPN3
STRA6
PITPNM2
OAZ2
CITED2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
KCNMB4
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
LEMD2
FOXI3
TMEM47
NEUROG1
EPHB3
DACT1
NDUFV1
ZNF536
MUC3A
PACSIN2
PDIA4
ROR1
NUAK1
C1QTNF7
PHC2
HES1
APELA
FAM24B
ZNF296
GEMIN7
CCN2
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
NECTIN1
ARID3B
SIX2
FZD5
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ZNF195
REV3L
ESR2
CFLAR
TMUB2
URGCP
FUS
TIAM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
PDE1B
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
TCF4
TRIM28
ERVH48-1
ANXA2
ST3GAL6
EYA1
DIDO1
ATXN7
CST1
CCN3
CXADR
SLC33A1
HHIP
ETV6
MARCKS
TSPAN13
FOXO6
CCL26
GID8
MVB12A
ZBTB18
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
NDUFAB1
CLPB
SMIM14
TSPAN14
PRKAG2
INTS9
HMBOX1
KANSL1L
SLC25A36
TUT1
MTA2
ZNF649
KCNIP4
MSANTD4
ZNF565
NPSR1
SYNDIG1
ZNF674
DPPA4
AGK
SDK1
SLFN12
RAB15
ERMN
TEAD1
TCP1
MRPL18
LBP
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PDK1
NMNAT2
BCL9
SOX13
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
FAM227B
DISP3
TNS3
URGCP-MRPS24
SLC23A2
PLA2R1
TFE3
TET3
STOX2
MAGEB2
CDH10
TMEM43
CHCHD4
SHANK2
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
NEUROG3
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2
PSEN2
TJAP1
MBD4
IFT122
AFAP1
MTHFD1
MMP10
UHRF1BP1L
LRAT
NUP160
SLC2A8
TLE1
COL4A2-AS2
BST2
KRTAP3-2
DUSP1
RASSF8
NBPF20
SPHK1
ENKUR
WDR36
RNASE9
ARHGAP42
CEBPZ
ESX1
ZSCAN9
BIN2
FAM20A
PCYOX1
SLC16A13
SLC16A11
RAPGEF5
FRY
ZP2
ABCC10