ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX277131 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◣ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
NDUFB5
MRPL47
SMCO1
FAM227A
CBY1
DNMBP
MED25
FUZ
KRT86
NOTCH1
OR13C5
OR13C2
SOX21
IFRD1
ARIH1
ENKUR
ZSCAN2
IQCH
AAGAB
CYP1A1
TNRC18
LOC100129484
PXMP4
DUX4
TSKS
AP2A1
CUEDC1
COL23A1
ARID2
BCL2L1
LMCD1
HMGB1
ISL2
EPHX1
CAPRIN1
CYTH2
SNAPC3
MTF2
PHF5A
ACO2
UGT1A6
EFHC1
LFNG
VWCE
HDAC9
GRK6
PDIA4
DDX17
RNF20
EXOC6
MUS81
CFL1
SLC16A13
SLC16A11
ZNF775
KRT31
PIK3C2A
MAST1
RTBDN
CSRNP2
OAZ2
PTMA
FLG
ANKRD10
YEATS2
TES
STK31
PADI2
PTPRB
RPGRIP1
CELF3
RIIAD1
RFLNA
PLA2G6
NTRK3
NRCAM
ZNF608
UFD1
CDC45
SLC2A8
UBTD2
KLHL24
SH3GL3
TXNRD1
PSG1
COL17A1
ACSL6
ABCC1
MSANTD4
SLC25A36
POLB
MCCC1
KRT8
ANXA11
KIF6
ONECUT3
PHACTR2
DUSP1
HMOX1
TCIM
ESRRA
CATSPERZ
ST6GAL1
DENND4A
CDC42EP3
LYPLAL1
MATR3
RNF187
SOX6
MRPS18B
ATAT1
C11orf58
CAPNS2
NUP160
TMEM88B
ANKRD65
FRG2C
TGIF1
TBC1D17
PNKP
AKT1S1
MIDEAS
MAMDC2
OGA
KIF5C
BORCS6
FMNL3
HEXIM2
CEP41
GSTO2
RSF1
AAMDC
SMCP
FBXL19
DDX3X
NTF3
PTPRN2
TESK2
MMACHC
CCDC163
ZNF436
CORO1C
PGAP4
YES1
KDM4A
CHD6
ZFC3H1
THAP2
ITGB1
CEP63
ANAPC13
SDF2L1
CCDC116
FOXP1
CPT1A
ABLIM1
ERV3-1-ZNF117
ERV3-1
SOX8
LMF1
DST
TSNAXIP1
RANBP10
KDM2A
DISP3
PIF1
PIK3CA
ELOVL5
CCT2
DLGAP1
RBBP9
KMT2B
C1QTNF7
ZDHHC3
EXOSC7
KIRREL3
UAP1L1
SAPCD2
ZBTB6
RC3H2
SPRY4
PHRF1
EML2
C3orf20
CNN3
DHRS12
FOXO6
SAXO1
RRAGA
NKIRAS1
OLFML1
NR1D2
CDKAL1
SYNCRIP
YWHAG
PPT1
RNF44
CDHR2
PMEPA1
PIK3R3
DHX8
COL9A2
HMGN1
TRIM2
EP300
HES5
PANK4
PHLDB2
HSPA13
PIPOX
HSPH1
ETV1
TIAL1
ZNF92
ZFX
GSN
POLR3E
MAST4
ANKRD6
SINHCAF
ADGRD1
LMNA
NCOA4
NFE2L2
ACTB
SIX2
YLPM1
ZNF148
TXNRD3
SOX2
FZD2
MAML1
GET3
MRPS16
HGS
ARL16
EMSY
GADD45A
DKK3
CHST7
TUBB
MDC1
HACL1
BTD
MCTS1
LAMTOR1
ANAPC15
NDUFS5
WDR36
RAPGEF5
PRDM2
PGK1
MMP10
GOLGB1
RETNLB
MUC1
PPP1R2
CBX1
MNT
PTCD2
MRPS27
SNX11
RAB11B
ZNF627
LTF
MARCKS
SHC3
PLCH1
TINAGL1
PRR14
FBRS
ALDH3A1
MEX3D
PIMREG
AIPL1
AKR1C2
ID2
TMTC3
CEP290
FLYWCH1
MRPS30
PDIK1L
ECT2
CCDC88A
RDX
FRAT1
ZNF697
PYCR2
MIDN
ATP5F1D
UPK3B
KMT5A
TDGF1
LRRC2
PRSS23
KDM3A
FRG2
FGFR2
RARB
KLHL5
SCNN1A
LTBR
FEM1A
MSMP
NEBL
SLX4IP
MKKS
ADH7
F11R
STK32C
LRRC27
TRAK2
STRADB
ZNF865
ZNF524
FIZ1
ZNF195
OSBPL11
DAGLB
SDHD
CDRT15
ZNF80
ADAMTS10
CNPY2
NEFH
NDRG4
FZD1
TMEM17
RABL3
GTF2E1
GPR158
TBC1D23
CRIP2
NASP
PPP1R9B
PPP4R1
LDB1
UNC93B1
ALDH3B1
LRRFIP2
CBX2
ZNF335
ZFAND3
ADGRL1
ADPGK
MEOX1
PELATON
MAPK12
UBQLN4
LAMTOR2
TLX3
NSA2
GFM2
S100A6
COA6
FXR1
GOLIM4
S100A5
S100A4
S100A3
RAB30
CDK5RAP2
OR10V1
ATP2C1
EIF4A2
ZSCAN9
TRMT2A
RANBP1
MEIS3
ZDHHC5
PELI1
RTRAF
SNCA
MTRNR2L8
SHF
NOL3
KIAA0895L
EXOC3L1
E2F4
TCF12
ERCC1
ETV6
PPIA
WBP1L
ZNF304
RBFOX2
SFPQ
CHST6
SLC25A11
RNF167
PFN1
GP1BA
TUT7
KCNJ15
KCTD4
KRT19
KRT15
DLG1
MLEC
SSUH2
ADRM1
ZCCHC14
UNK
H3-3B
HLTF
OARD1
NFYA
PEDS1-UBE2V1
PEDS1
RPL15
FAM76B
CEP57
RNF183
FAM166A
TUBB4B
TUT1
MTA2
TM4SF1
ETFB
TUBA1C
ZBED5
SLC38A5
FTSJ1
UNKL
ZCCHC12
POU2F1
ZNF250
DYNLT3
ABCG1
RNF5
AGPAT1
AGER
TMEM249
SLC52A2
FBXL6
NRG1
ID1
G3BP1
RABGAP1
EXOC5
AP5M1
ZBTB26
PROSER1
NHLRC3
ICAM5
ICAM4
PER2
VASH2
DPP3
CREM
HSFX3
EOLA1
PRR15
ADAR
RAB11FIP1
ENOSF1
PYGB
SH3BP4
ASMTL
PARP16
ZNF84
SRSF6
LIMK2
CSK
LHX5
FGD6
VEZT
RBMXL1
KYAT3
HCN4
WDFY2
CD2BP2
SLC2A4
NT5E
OGDH
PHYHIP
POLR3D
SLC34A3
RNF224
RNF208
CYSRT1
CCDC171
MORF4L1
MXD1
CXCL5
NATD1
ALPK2
APAF1
DMRTA2
IKBIP
ZBTB40
PIN4
FAM102A
VGF
MFN1
WDR74
STX5
CBR4
DAAM1
DCAKD
TLN2
SFR1
WEE1
H2AZ2
KRTAP19-3
KRTAP19-2
KRTAP19-1
PADI3
TOMM40
OIT3
PRR16
TTF1
CFAP77
CDK16
NDE1
MARF1
H3C15
H3C14
H4C15
H4C14
HNRNPDL
ENOPH1
WBP11
C12orf60
NDUFB4
SC5D
HSPA5
C1orf158
CCDC57
FJX1
GJC1
SNRPE
WDPCP
MDH1
CDC37L1
ZSWIM4
HBP1
GAL3ST4
STAG3
GPC2
MTHFD1
OTUD5
SPRED2
ELAPOR2
RRBP1
GET4
MAP3K5
SUFU
ACTR1A
LPIN1
SRPRA
SSR4
IDH3G
PPME1
C2CD3
IREB2
CALR3
C19orf44
UCHL5
RO60
CBLB
EPHB3
WSB2
IP6K2
SLC4A2
CDK5
ASIC3
RPTN
SPOCK2
ETV5
NFATC3
AMN1
BCL2L11
LZTS1
PGM2L1
TEX12
IL18
TPM1
NWD1
ACP7
RFX1
UMAD1
NDUFS2
ADAMTS4
SLC35B4
PCM1
FGD3
SPAAR
HRCT1
ACTR2
STK35
GPATCH8
GSC2
HNRNPUL1
EIF1AX
RPUSD4
FAM118B
ESRRG
DUSP4
HNRNPA0
SCAF4
SMARCA2
REST
LOC102724770
DGCR6
CDX2
NES
TMPRSS11E
NAV2
NR5A2
SACS
DPPA5
SMAD7
PLAGL1
TERF1
CADPS
ARHGEF38
METTL11B
ZNF483
ANKRD1
GAST
LRRC10B
MUC4
ID3
CACHD1
DUSP6
AGO1
ATP1A4
ZBTB8OS
RBBP4
URM1
NTRK2
TCF7L1
APOBEC3F
RMND5B
RIPK1
LRRN1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
VENTX
UTF1
SFRP2
SOCS3
LRRN3
TENT5B
BCOR
SERINC5
FAM222B
MTRNR2L1
TARS1
GIMAP5
FGF1
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
PHC1
SRRM4
CD82
SSB
ITGB8
PRICKLE1
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
MTHFD1L
KIF21A
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
DNMT3B
ZFHX3
SLTM
ETS1
DMXL1
KLHL7
FBXW11
ABHD17B
SHISA5
PLPP2
NANOG
TREX1
TALDO1
TNNI3K
GLYATL1B
SMPD1
RNASET2
SCGB3A2
MED12
IL2RG
HOXB1
HESX1
KDR
CBFA2T2
GBX2
RASGRF2
SLC7A5
HSCB
CHEK2
GLRA1
PPP1R16A
ZNF398
MRPL20
NADK
FGD4
NFE2L3
FOXH1
GAS1
ART1
DDX43
HOPX
PSMD9
HPD
VCAN
ITPRID1
TRAPPC8
ETV4
GOLGA6B
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
TUBB2A
ZNF343
NCDN
KIAA0319L
PPP1R16B
LDB2
FZR1
GNAI2
GOLGA6A
SCN5A
LEFTY2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
LHPP
CER1
GADD45G
USP44
ATP8A2
RPS24
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
GPRC5B
C1orf127
TRIM24
GSX2
ICMT
HES3
FAM120B
CSAD
CDC14B
LCA5
LIN28B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
MTRNR2L2
MSH3
DHFR
FBP1
LIMCH1
IL34
PBX2
GPSM3
SYBU
DDX46
ZCCHC3
C20orf96
GOLGA6C
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
APBA2
PUF60
MKRN1
CYP2S1
GCNT2
TMEM63A
ESRP1
PHLPP2
PSMG3
SOX5
TMCC1
ATF4
LINGO1
FRAT2
RIF1
SLA2
RNF220
KIFBP
LEFTY1
FOXA2
DLL1
PRDM14
MRS2
BFSP1
STN1
NFE2L1
SGMS2
SAMD5
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
ZEB2
FBXO40
HOXD11
SALL3
MACROH2A1
CRH
MIEF1
WDR55
DND1
RASA1
ECE1
MDN1
NLRP12
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
PDPN
RFX4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
DDR1
ITGB5
THOC3
APOBEC3D
APOBEC3C
VOPP1
MAD2L2
LARP1B
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ST18
EOMES
DHX32
MID1
SYT2
PDCL
POSTN
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
EEF1A1
CD24
ALDH1A2
EBF2
DGLUCY
DUSP29
BEND3
DPH6
UQCRHL
COMMD7
TMC5
PCBP1
CHFR
CDYL
SASH1
EAPP
MORF4L2
CA6
KNDC1
C1orf100
TCF7L2
FAM180A
AASS
CPA2
BICD1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
ONECUT2
KCNN2
SCARB1
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
MANBAL
FAM200B
KIAA0895
IGFL3
SMYD2
LRRTM4
LIN28A
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
TTYH1
CARHSP1
SRCIN1
FGF12
TIMP4
TRIB2
CTNNA1
LRRTM2
ZSCAN10
EXT1
FEZF2
FOXD1
GABRQ
AK4
TIAM2
TMPO
OLFML3
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
SLC36A2
PGPEP1
RTN4