ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5771668 | N2102Ep
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◣ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
MTHFD1L
MUC4
ZNF483
NRG1
CD99L2
TERF1
REST
LRRN1
GAST
COL17A1
TMPRSS11E
TENT5B
FLVCR1
SPATA45
HOXB1
ZSCAN2
BTG2
ECE1
SMAD7
SHC1
FLAD1
CKS1B
SAMHD1
ZBTB8OS
RBBP4
SPRED2
PIM2
SFRP2
SLA2
SOX6
LRRC10B
TCF7L1
APOBEC3F
CRH
ID1
OR5AR1
RMND5B
RPS24
TIMP4
SSB
ID3
GPR85
MORF4L2
FAM222B
DPPA5
ZNF343
ZYG11A
FGF1
SGK1
SNRPN
ARHGEF38
SHISA5
TREX1
ZSWIM3
ACOT8
ABO
SHCBP1L
METTL11B
CACHD1
DMXL1
TRAPPC8
CRYGB
CELF4
DNMT3B
RIPK1
RNASE6
EDDM3B
DCAF4L1
SLC30A9
ZNF398
HOXD11
HOXD13
HOXD12
GDF11
PEAK1
HMG20A
NES
BDH1
IFT80
MRPL20
IL34
BCOR
GPR31
ACOXL
OR6A2
VENTX
UTF1
SH3GL1
CHAF1A
ATP8A2
PHC1
GSX2
RCN1
MED12
IL2RG
GDF3
HSCB
CHEK2
PARP1
FBP1
PIPOX
WFDC8
GAD2
SLTM
TNNI3K
HESX1
RASGRF2
CAPN3
SALL4
LMCD1
TDGF1
LRRC2
BICD1
ANKRD10
SMPD1
RNASET2
TRIM56
DUSP6
TEKT3
KLHL3
TRIM2
C9orf85
ABHD17B
PUF60
NRBP2
GIMAP5
NTRK2
NCDN
KIAA0319L
SACS
ANKRD1
HOPX
PLSCR4
LDB2
LEFTY2
LIN28B
FAM20A
CDX2
DDX11
ATP1A4
FBXW11
ZNF608
MKRN1
LARP1B
PPEF2
PSEN2
FAM174B
PRICKLE1
MFHAS1
LHFPL4
FZR1
MYSM1
CDYL
WDR55
DND1
NBPF15
SMAGP
RPH3A
LRRN3
AMN1
UHRF1BP1L
DACT1
VCAN
SEC14L5
PSMD9
HPD
ZNF18
DRD1
SMC6
GEN1
SYT2
C22orf39
TPH2
ANAPC4
SNURF
MAGEB2
EOMES
SLC23A2
TALDO1
KRT6B
MFSD4B
PTBP2
CPA2
GLDC
IL13RA1
TMEM43
CHCHD4
GOLGA6D
ETV1
FGD4
FOXP4
ITPRID1
TARS1
SLC35A5
ATG3
ABCB5
RBM22
ESRP1
SYN3
PCDHB5
PCDHB4
MTRNR2L8
CLDN9
CLDN6
NANOG
ZFHX3
ARAP3
EXT1
JAML
L1TD1
FZD8
CA6
TRIM24
PYGB
MAD2L2
DRAXIN
PNRC1
ISOC2
HBG2
HBG1
CD24
ZBTB40
HAND1
TRIML2
AK4
TRIT1
OR4X1
FXYD7
ENSA
FAM98A
TET3
ZNF296
GEMIN7
FBXO40
UGT1A6
UGT1A7
CEBPZ
CNGA1
NIPAL1
PPP1R16A
FOXH1
SLC36A2
SOCS5
BOD1L1
NEPRO
CDC42EP4
NPSR1
ZNF674
GLRA1
USP44
GALNT18
MBNL2
C10orf95
MFSD13A
WDHD1
SOCS4
GSN
GLYATL1B
LIN28A
SELPLG
NATD1
ANXA2
CSAD
ZNF740
ITGB3
DOK7
FRAT2
FSTL4
PRDM14
JPT1
TCP1
MRPL18
PNLDC1
PCDHB9
PCDHB16
PCDHB8
PCDHB7
C1orf127
FZD2
ZNF875
TUBB2A
PDGFA
RAD18
PCDHGC5
PCDHGC4
PCDHGC3
TRPC4AP
TNK2
CADPS
MLEC
NXPH1
PRODH
LOC102724788
LEKR1
KIF21A
AGO1
ALDH1A2
NECTIN1
PITPNM2
STX16
ASIP
RIN1
SOX21
P2RY12
DNMBP
KLHL7
FGFR2
ALDH2
IRAK1BP1
RASA1
DPPA4
KLRB1
ZNF318
SMIM32
REV3L
ESX1
SMPDL3B
TRPM1
PTH1R
SMYD2
PSIP1
SERINC5
RESF1
GOLGA6A
ATXN3
ZNF770
FEZF2
AGK
BIRC6
URGCP
URGCP-MRPS24
SOX4
PREX2
ASH2L
TRIP4
PCLAF
MTM1
DNAJB1
CDC14B
ELMO3
SNX19
IGBP1
ZP2
DDX46
NFE2L3
EPHA4
MDN1
NDUFV1
IFNE
TMEM98
INO80D
OR5K3
TMEM167B
TMEM47
TCHP
SYBU
TMEM170A
LONRF3
FGD3
MOG
MAGEA11
PCBP1
SLC66A2
HSBP1L1
TNFSF8
TRMT10C
LIPK
BRWD3
ZNF436
NDST1
KCNMB4
PAK1
ADAMTS16
TAS2R46
IL1A
NACAD
ZDHHC14
SENP2
NRG2
TMPO
TBC1D16
CST1
CCDC149
PRKG1
PTAR1
NAV2
SALL3
SEPTIN5
UGP2
APOBEC3G
KRBA2
SRCIN1
KDR
IER5L
DIDO1
GID8
YIPF4
NLRC4
ANKRD40
LUC7L3
RNF186
PPP1R16B
GPRC5B
CCBE1
CCN3
RHBDD2
OBI1
SEMA6D
CSF2RB
S100A11
GCNT2
BTBD10
MAGEA10-MAGEA5
MAGEA10
SLC25A16
CLDN14
PPP2R5A
PCDHB12
PCDHB14
PCDHB13
ACCS
GIGYF1
TRABD2B
TCP11L1
GOLGA6C
PTPRN
SOX14
KCNMB2
HDAC9
SGPP2
FGF4
LYPD6B
GOLGA6B
UNC13B
SREBF2
ZNF565
GLI2
SPIC
GXYLT2
OLFML3
AEBP2
GABBR1
DSP
PLEKHA5
CCDC13
PTDSS2
GTF2I
DDX39A
PKN1
SP7
KCNIP4
KNG1
UQCRHL
WDR44
PPP2R3A
TMEM70
LY96
EPAS1
FIGNL2
MACROH2A1
UNC119
CDX4
UBXN10
PLA2G2C
BCL2L1
PHTF1
SLAMF1
MEIS2
BCAT1
YAF2
PRR7
FOXA2
KRT8
OLFM2
PALM2AKAP2
DGAT2L6
USP7
CNR2
CMAS
GNAI1
LRRC47
RNF19B
ITGB5
CRTAM
CD82
PPP1R15A
PGPEP1
MBOAT2
MAP6
BEND3
VANGL1
GUCY2F
SLC38A9
NMNAT2
PCDH19
PSMG3
KIAA1522
FOXD3
NDUFAB1
CYP4A22
B3GALT5
GBX2
HNRNPA3
MBNL3
ANP32A
SAMD5
C5orf60
NHLH1
ICMT
HES3
LRRTM4
HECW1
PWWP3A
CNPY1
NADK
DDX43
ATG10
MPP2
LRAT
PRUNE2
NLRP12
ZNF335
CSHL1
MUC1
ZNF90
PAX6
METTL7A
PHF8
TMC5
CHFR
SCAP
LHPP
SLC34A1
PFN3
NKX1-2
PLAGL1
CCDC169-SOHLH2
CCDC169
MRS2
SYNPO2
ZNF781
MT1HL1
ZNF814
CAAP1
MCCC1
JARID2
PDCL
GPR150
SGMS1
MRPS21
CCDC130
NBPF12
SPHK1
ZFYVE1
PHLPP2
PHETA2
NAGA
ABCC2
MLN
ZAP70
FGF6
NCR3
AIRE
H3C15
H3C14
H2AC19
H2AC18
PDE1B
REXO4
ADAMTS13
OR13A1
ADAMTS1
FOCAD
IFIT3
KLHL4
AADACL3
SIN3A
KRTAP5-9
KRTAP5-8
IRF3
BCL2L12
SASH1
PALLD
EFNB2
VIM
PPBP
PF4
GJA1
AUH
GSPT2
SCGB3A2
CDC42EP3
NR5A2
PRR15
DHX32
LINGO1
ZEB2
PIN4
RAX
CSGALNACT1
STON1-GTF2A1L
SAV1
KCNJ1
TTLL4
AQP2
HELLS
TMEM9B
PTPRB
LYPD1
TIAM1
ZFP3
ATF4
MIEF1
GYG1
SLC20A2
LHCGR
SULT6B1
CEBPZOS
KLF17
CERCAM
GCSAM
DENR
TSPAN18
FYN
SLFN12
FHL1
NAA30
FBXL14
UPF1
POGLUT2
BIVM
DNAJC3
BARD1
POMZP3
CCDC54
PPAT
RAPGEF5
MOV10
SESTD1
MTF2
CCDC33
COPZ1
TRIM14
ADAR
ALPL
FGF13
KMT5C
COX6B2
KDM2B
F11
NFKB2
GADD45G
SOCS3
PDK1
MVB12A
BST2
GABRQ
PCDH1
FAM24B
CCL2
TBC1D30
CCDC144A
HYOU1
VPS11
URM1
GMCL2
USP32
MCOLN3
DUSP12
NDUFA4L2
ARF6
TESK2
MMACHC
CCDC163
MGAT4C
RMND1
ARMT1
CFAP410
IL21
ARHGAP22
FRMD7
OR6C3
PEX12
AP2B1
SCAF4
MID1
RIF1
CDC25A
FAM180A
ASXL3
EPHB3
WDR49
SLC66A3
ABCA13
TECR
SGMS2
KANSL1L
SOX2
AASS
HHIP
CRYBB1
OCSTAMP
DNTT
NEUROG3
SLC46A1
ZNF664-RFLNA
ZNF664
CCDC92
RNASE9
ABCA4
GRIP2
C1orf100
PLA2R1
PLPP3
MPDU1
LOC100996842
SOX15
SLC7A5
TRIM16L
PCGF6
ABL2
SYTL2
SLC10A6
ZNF438
MPZ
SDHC
FAM131B
ARID3B
HSPG2
MT1E
SLC39A8
TSACC
CCT3
ETV4
EPB41L4B
LHFPL5
CLPS
CCDC167
IQCF2
NAA50
ATP6V1A
SCN5A
BRDT
UTS2R
MINAR1
SCARB1
NEUROG1
RAB15
FNTB
TBC1D1
GRAMD2B
ST3GAL6
PKIG
SERINC3
OR2B3
OR2J1
ATP6V1G1
ZIC3
SLC25A5
NT5DC1
PBDC1
KCNN2
C16orf78
LRGUK
CEP135
TTC13
PCNX2
ZXDC
ZNF536
SOAT1
OCM
BICRA
ETNK2
MORC1
CFLAR
ZNF600
SLC35F6
C8orf76
GAS1
GABRB3
EIF4A2
NBPF20
ARSL
B4GALNT2
ZNF649
RNASE10
TESK1
CDH26
ZC3H12B
TINAGL1
TBC1D23
NANOGNB
CLEC4C
TLL2
SPTY2D1
BEND7
KAT8
POU5F1
PRRC2B
FUS
NKIRAS2
DNAJC7
SLN
RTL8C
ELOVL6
TCEAL3
PDPN
KLHL5
CCNT1
TEX49
EBF2
FCRL4
AMHR2
FAM126A
MS4A12
ZBTB45
ZNF75D
ETDC
SPIN1
CCDC85A
FXYD6-FXYD2
FXYD6
PLAAT4
OR6J1
FRY
PPP1R18
NRM
ZNF552
SOX5
KNDC1
DHRS3
AGL
BLOC1S2
ZNF624
PRMT2
SRSF4
CDH4
BCKDK
PXDC1
CAPZA2
SLC25A12
GJA10
IL22RA2
ARL15
UBQLN4
LAMTOR2
ZMAT2
SMAD3
NMNAT3
MPV17L2
ARHGAP36
BUB1
GPC4
RAB40AL
CCDC172
SHF
TRIM71
ITPKB
MAD1L1
TP53
WRAP53
ADAMTS9
ANGEL1
LRRC74A
RAD54L2
MAP4K3
CCDC9
CKAP4
NAXD
RNF187
GPR149
THEM5
ERVH48-1
ZNF202
GPM6B
NSUN4
MCHR1
RIC8B
SRRM4
PMEPA1
CER1
FZD5
CCL26
C19orf25
TRPM3
DEFB107B
DEFB107A
PRR14L
DEPDC5
FAM200B
OR5H1
OR5H14
TUT4
GATA3
ADGRF5
TEAD1
HCAR3
HCAR2
SQSTM1
MGAT4B
SLC13A2
ATP5F1E
TUBB1
THBS2
ZC3HAV1
SMIM11B
SMIM11A
KCNE2
SMIM14
ARID5A
DCLK1
RTN4
SPATA22
AKAP7
NECTIN4
NCOA7
VOPP1
KRTAP3-2
KRTAP3-1
NUP205
MOB1A
BEST3
ETS1
SVOPL
KCTD7
C1R
SURF6
RYR2
MSH6
GNAI2
NRROS
LHX2
GALNT8
BLCAP
IGSF1
PADI4
CAPN13
TMEM63A
LEFTY1
INTS9
HMBOX1
ADGRD1
RBP3
CATSPER3
THOC2
RASAL2
SERPINB6
RAC3
DCXR
ACSL1
IFRD1
ADGRL2
AKAP1
PROCR
RPS10-NUDT3
RPS10
EIF4EBP2
EPB41L1
SLC35E4
NEB
RPSA
EFCAB8
HLA-DQB1
SPP1
BTNL8
TBC1D14
PINK1
SERPINB8
LOC150051
PRRC2C
ELAC2
HSD17B4
SLC5A9
EEA1
ZIC2
ZIC5
CAVIN3
OR2S2
PRKAA1
TMPRSS11F
ZSCAN12
CCM2
FAM193B
FRMD4A
ZNF532
ANK2
MSX2
ECHDC1
BIN2
SUMO3
MSTO1
TEX37
UBR2
CLIP2
MARS1
ARHGAP9
SUCLA2
TMEM68
TGS1