ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532164 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◣ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
LOC102724770
DGCR6
GOLGA6D
DUX4
NR5A2
POU5F1
SRRM4
FRG2C
DNMBP
CLDN9
CLDN6
NES
LFNG
ID3
MTF2
TERF1
CDX2
MUC1
URM1
GOLGA6B
TCF7L1
EEF1A1
SOX2
SMAD7
PLAGL1
PPBP
PF4
SMARCA2
NANOG
SACS
PIPOX
AGO1
PRKG1
PLPP2
FRG2
GOLGA6A
LHPP
FGF1
CBFA2T2
GOLGA6C
RMND5B
ART1
PRICKLE1
SHISA5
TREX1
RNF220
REST
FAM227A
CBY1
COMMD7
SOX6
RPGRIP1
GNAI2
SSB
NADK
ZNF483
GAD2
FBXO40
KDR
FGF2
HMGB1
BUB1
CARHSP1
NFE2L3
ARHGEF38
SFRP2
TLE1
ATP1A4
PTMA
FLVCR1
SPATA45
VENTX
UTF1
CD82
DPPA5
ANKRD1
DUSP6
CDC14B
TMEFF1
CADPS
NEUROG3
EYA1
CYTH2
TES
APOBEC3D
APOBEC3C
FAM151B
SCGB3A2
TGIF2-RAB5IF
TGIF2
LRRN3
CNPY1
FOXD1
FAM120B
DLL1
ETS1
APOBEC3F
WNT5B
CREB5
SNRPN
OBI1
GPRC5B
SULT6B1
CEBPZOS
PIM2
DDX17
ESRP1
ZNF536
LRRC10B
PHC1
MUC4
ZNF398
FAM174B
C9orf85
ABHD17B
BCOR
GIMAP5
CACHD1
SOX5
NFE2L1
RPH3A
CD99L2
NAV2
ZNF775
TALDO1
IER5L
ROR1
TENT5B
RIF1
MDN1
PHLPP2
ZSCAN2
PARP1
BDH1
LZTS1
TARS1
NCDN
KIAA0319L
MEX3D
ATG10
NDUFB5
MRPL47
ZNF18
PPP1R16A
FOXH1
TMEM63A
LEFTY1
PMEPA1
SMN2
SMN1
NTRK2
ZFHX3
PCBP1
RNASE6
EDDM3B
MLLT6
KLHL7
IQCH
AAGAB
ZNF532
TRIM13
SGMS2
BTG2
KCNN2
WDFY1
DDX3X
CDH10
ISOC2
ZNF649
LIN28B
TRIML2
ZNF608
SAMHD1
FZR1
LDB2
HGS
ARL16
HOPX
LRRTM3
MAD2L2
DRAXIN
RIPK1
SHCBP1L
MRS2
NLRP12
TRIM24
SACM1L
ZCCHC3
C20orf96
METTL11B
SEPTIN5
LIN28A
PBX2
GPSM3
ZBTB45
TRIM28
FBP1
CER1
ARID2
GMCL2
SMIM32
DPH6
HMGN1
JADE1
GTF2I
AASS
SMIM14
PCNX2
PHF5A
ACO2
ZIC4
L1TD1
GADD45G
PDGFA
PTBP2
HSCB
CHEK2
GCNT2
FBXL19
PRSS48
POSTN
FAM24B
CRYBB1
CRYBA4
HDAC9
USP7
TFE3
TEKT3
USP44
IL17RD
SNAPC3
SINHCAF
KNDC1
ENSA
FOXI3
ZSWIM3
ACOT8
ARAP3
GLB1L3
ZFC3H1
THAP2
PODXL
FAT1
SEPTIN9
LRRN1
PRAC2
PRAC1
HOXB13
FGD4
ONECUT2
GLI2
TFAP2A
VANGL2
GDF3
PCDHB5
RNASET2
CELF3
RIIAD1
RFX4
DDX43
SMYD2
CACNG8
TUBB2A
CBX8
SNURF
ESX1
KCNA4
KIF21A
CHFR
SAMD5
KMT2B
HOXD11
HOXD13
HOXD12
SCAF4
AHCYL2
TACC2
SHANK2
LINGO1
PREX2
SENP2
PSMD9
HPD
OR5K3
SLTM
CSRP2
STOX2
TKT
CAPZB
PRDM14
HMOX1
SALL3
PHETA2
NAGA
IGFL3
CNMD
DNMT3A
TJP2
NOTCH1
MEIS2
CFAP298-TCP10L
CFAP298
IGDCC3
SOX14
CSNK1E
SRCIN1
TRAPPC8
SPIN1
TMPRSS11E
SOCS3
FGFR2
AKIRIN2
SOX21
SLC2A14
GLYATL1B
BORCS6
CEP41
FAM180A
FYN
ZBTB8OS
RBBP4
ZNF304
MOG
CCDC169-SOHLH2
CCDC169
DPPA4
FAM110D
ZNF506
GRK6
SLFN12
EOMES
AEBP2
KIAA0895
SIN3A
LRRC47
MFSD4B
ZNF202
FAR2
MARCKS
PGAP3
ERBB2
RNF213
AJAP1
ETV4
IL34
MAST1
RTBDN
ZNF484
PLA2G2A
HSPA13
HNRNPU
ZNF664-RFLNA
ZNF664
CCDC92
ZFP36L2
ID1
AFF1
NRG1
A2ML1
TSKS
AP2A1
CHRNA1
SLC46A1
SLCO5A1
JMJD1C
SLC25A36
BBC3
KDELR1
GRIN2D
RIPK4
KCNJ1
PRKAG2
ARIH1
TDGF1
LRRC2
ADGRD1
DNTT
SRSF7
ISL2
TSPAN5
MDK
ICMT
HES3
DISP3
PYDC5
IFI16
ARHGEF19
TRAK2
STRADB
BRINP2
ASTN1
UBQLN4
LAMTOR2
INO80C
TPH2
GSAP
GNA12
GABRB3
KLF7
E2F7
GSX2
F11
TEAD1
SMCO1
PDPN
ZNF296
GEMIN7
OR5F1
LEFTY2
ADA2
SLC39A8
DIDO1
GID8
BCL2L14
BEND3
LRFN5
CELF4
HESX1
DAGLB
MID1
RPS24
LRRC8A
KYAT1
ZNF781
CCN2
CHMP7
GHRH
SP9
GAST
UGP2
GJA1
DCAF4L1
SLC30A9
EXOC7
OIT3
DEFB113
DEFB114
CDH6
CAPRIN1
RAB17
KBTBD2
VASH2
STN1
FOXA2
PSIP1
TUBB
MDC1
PGBD5
TBC1D2
MED25
FUZ
ZSCAN10
PLPP3
SH2D3C
SLC6A8
PNCK
PDP1
EBF2
PHAX
ALDH7A1
C7orf57
SUN3
INO80D
SLC16A13
SLC16A11
TNRC6A
ZXDC
ADD2
ZEB2
C6orf132
PTPN9
FOXO6
PLCG1
PDIA4
FXYD7
CNOT11
POLB
SERINC5
MVB12A
BST2
PAG1
MUS81
CFL1
CPT1A
FERMT1
LITAF
MTRNR2L1
CD24
BRINP1
ACVR1
ETV1
KIFBP
PDCL
GSTT2B
GSTT2
DDT
PANX1
SPRY4
CCT2
SEMA6D
AFAP1
LOC389199
FOXP4
AASDH
GABRQ
NOG
RASA1
OAZ2
EP300
COBL
COL23A1
GRIN3A
LIPK
HEY2
RASGRF2
CCBE1
CD200
HEBP2
HDAC2
FOXB1
TMUB2
FRMD4B
C1orf127
PSMG3
HBP1
FAM222B
NANOGNB
CLEC4C
GRID2
TCF7L2
CDKN1A
MSR1
ATXN7L3
TMEM70
LY96
S100A11
MYSM1
SMAD3
DMXL1
CYP1A1
FZD8
SMPD1
PDE1B
TSNAXIP1
RANBP10
OBSL1
INHA
FAM153B
QSER1
GFPT2
CASP12
NAA50
ATP6V1A
TESK2
MMACHC
CCDC163
TNRC18
LOC100129484
ARID5A
VOPP1
IKZF5
ACADSB
HES6
GMPPA
ASIC4
ZNF428
SRRM5
ZNF627
KDM2B
CSRNP2
ZIC2
ZIC5
ARSD
SNX27
SYNDIG1
FBXW11
PLA2R1
SYNCRIP
ZNF140
CYP2B6
NFIX
LAMTOR1
ANAPC15
ESR1
PPP1R16B
SIX2
TFAP2B
TUT7
COX20
IFRD1
AMOTL2
SCAP
ASMTL
ITGB5
TRMT2A
RANBP1
SET
HNRNPDL
ENOPH1
OR7D2
NUP160
CTTNBP2NL
CHCHD3
AMN1
FADS3
TBC1D16
MSANTD4
LRIG1
FOS
CFAP20
TMPRSS11F
VCAN
MS4A4A
TNNI3K
TIAL1
ZDHHC5
SLC16A12
CLP1
SYNDIG1L
CTBS
PPP1R1B
UNK
H3-3B
MEF2C
KLF3
RBP1
PAK1
FZD5
KANSL1L
ZIC3
EBF3
PBX1
MRPL20
ATF4
MIEF1
TCAF1
RPSA
IGSF9
SLAMF9
ADRM1
ARHGEF10L
PHRF1
ANK2
DPP3
TRIM38
CDK5R1
ZNF576
IRGQ
NXPH1
BBS7
TRIB1
IL22RA1
YEATS2
SALL4
MKRN1
CYP2S1
TCHP
ZAP70
POU3F4
CCDC124
PLSCR4
AGK
GUCY2C
TMC5
TMPO
DTX2
G6PC2
LMNA
MEX3A
ZFAND6
TTC13
SLAMF1
CDH9
WBP11
C12orf60
KXD1
SPRED2
SDCCAG8
CEP170
ASPA
SMARCB1
SMC6
GEN1
PRICKLE2
EPHA2
SPRR2F
RNASE9
ADAMTS16
RAPGEF2
DDR1
TMEM43
CHCHD4
GPBP1
FAM98A
BUB1B
CCDC27
SGK1
P2RY12
ARC
LCA5
CHD6
TSPAN14
TAX1BP3
EMC6
LBP
MCF2L2
SCRT1
FAM167B
PPP1R18
HSD17B4
NRM
TFAP2C
HBG2
HBG1
SFRP1
VGF
CLCC1
SASH1
GPR31
OTX1
ZFAND3
ERCC1
PTPRK
TRIM2
GET3
RGS3
POLR3G
MBLAC2
PER2
DHX32
FGF12
RAD54B
FSBP
GID4
ATPAF2
CTH
NELFCD
PACSIN3
UBD
SLC24A3
LDB1
ARFGAP2
SH3GL3
ESRRA
CATSPERZ
KBTBD8
SEPHS1
LRRTM4
ADGRL2
PLCH1
LGR6
JAG1
PES1
TCN2
TMEM242
DLX5
ZNF121
IP6K2
CDC6
HOXB1
BCL9
S100A16
VTA1
NMBR
CAV3
GATA3
COL6A1
GPT2
PPME1
C2CD3
UNKL
GRHL2
NASP
MAPKAPK2
SCN5A
ATP6V1G1
OPN5
PDHA2
ZBTB6
RC3H2
PTX3
CHST10
OR5AR1
CSAD
ZNF740
OGA
ZIC1
RRBP1
FOXP1
WDFY2
INSM1
CCDC88C
RARG
ITGB7
N4BP2L2
ANKRD10
GSG1
POLR3E
PLAAT3
GADD45A
ADAMTS1
SP8
ERG
ZNF75D
ETDC
KCNMB1
SKIL
ANO1
LRGUK
PLEKHG5
HK2
CLEC2L
USP53
LRP8
FZD2
CAPN3
SGPP2
NECTIN1
TEAD4
DAAM1
RORB
VIM
WASF1
CDC40
ZNF763
ZDHHC1
HSD11B2
TIMP4
TPST2
SOX13
DMRT1
CAMKV
ETV6
ITGB1
ZSWIM4
CYP4F11
PPP2R3A
MT1HL1
OLFM2
ZYG11A
CTBP2
AKR1D1
MYCN
ZMIZ1
CELSR3
CMAS
NIN
SCARB1
ZNF195
PPAT
FOXJ1
NARF
CYBC1
EXOC5
AP5M1
FZD10
MIDN
ATP5F1D
PAICS
TEX45
FAM76B
CEP57
PEX11G
MACROH2A1
GNAI1
NEUROG1
FOXN3
UNC13B
STRA6
TENM4
TRIM71
INKA2
HRG
KLKB1
LARP1B
TRMT10C
YWHAQ
TRPM3
SCD5
RSF1
AAMDC
AHCY
GDF11
AK4
CCDC9
MRPS18B
ATAT1
SPAG4
PSMA1
CCNG2
RAB5C
PDE3B
CHRNA5
SBK1
FGD3
DHX8
CBX1
TNFRSF21
SNX11
LIMCH1
HECW1
ADNP
LMCD1
MCCC1
SYN3
SKIDA1
SYNPO2
KLRC1
MLLT10
KCNQ4
ST18
AUH
EIF1AX
ANKRD66
CNOT9
USP37
FOXO1
LLGL1
GUCA1A
SLC1A3
ARF4
RBBP6
JARID2
GNAS
RABEP1
MFHAS1
RPUSD4
FAM118B
KIF3C
SCD
OLFML3
NXPH2
ARL15
TNPO1
TMEM44
HJURP
RABGAP1
ZBTB26
CCDC146
BCL2L1
KNTC1
UQCRQ
GDF9
LEAP2
SPAAR
HRCT1
EPHA1
RAB30
GALNT8
BICRA
MTRNR2L8
C10orf95
MFSD13A
MBD4
IFT122
TM9SF1
SVOPL
TSSK4
RND2
VAT1
PRKCA
CCDC88A
C9orf135
ZNF3
COPS6
FHIT
CABYR
HNRNPAB
VRTN
DUSP29
HRH2
LGALS12
ZNF606
ATXN3
SERPINA1
CHN2
MUC3A
MPP2
HLTF
SALL2
SDF2L1
CPVL
SERPINH1
SUFU
ACTR1A
GSPT2
THBS2
DGLUCY
DCLK1
NMNAT3
TLCD1
RPL23A
RAB34
LRFN3
PROCA1
DUSP16
FRAT2
TTYH1
ARID3B