ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1047413 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◣ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SACS
NES
NR5A2
SMARCA2
PIPOX
PLAGL1
PPBP
PF4
NAV2
SOX2
SMAD7
ARHGEF38
HMGB1
CD82
FLVCR1
SPATA45
RMND5B
TERF1
LRRN3
CADPS
DNMBP
MUC1
TALDO1
BUB1
CDX2
RPGRIP1
TMEM70
LY96
SOCS3
ATP1A4
HDAC9
GOLGA6B
LRRN1
SSB
SPRED2
DPPA5
ATP8A2
OBI1
NTRK2
KLHL7
AGO1
DNMT3B
GOLGA6D
TCF7L1
LRRC10B
OR5AR1
BDH1
METTL11B
GPRC5B
ANKRD1
C9orf85
ABHD17B
RIPK1
RPH3A
TARS1
REST
MTF2
GOLGA6A
FGF1
CACHD1
FAM227A
CBY1
PSMG3
ID3
CBFA2T2
GLYATL1B
CYP2S1
KDR
FGF2
FBXO40
POU5F1
SLTM
TENT5B
APBA2
GOLGA6C
CLDN9
CLDN6
CACNG8
TNNI3K
LZTS1
SCGB3A2
SLC7A5
NAA50
ATP6V1A
PALLD
NFE2L3
CYP1A1
GIMAP5
PLPP2
SFRP2
SERINC5
PHF5A
ACO2
STON1-GTF2A1L
RAB17
FGD3
FIGNL2
GNAI1
SOX6
SRRM4
MUC4
SHCBP1L
PIM2
PHC1
DUSP6
RNASE6
EDDM3B
DAGLB
TNC
PRSS48
FAM222B
SAMD5
HOXB1
DHX32
IFRD1
ZNF483
TMPRSS11E
PPP1R16A
FOXH1
FBP1
ITPRID1
TMEM47
NANOG
SLC36A2
RASA1
SOX21
KIF21A
LIN28B
LRRTM3
DHDDS
PREX2
FAM180A
SOX5
GAST
IGFL3
HBG2
HBG1
TNFRSF11A
FAM174B
URM1
TUBB
MDC1
ZNF398
PPP1R16B
GAD2
ASXL3
PARP1
BCOR
NCDN
KIAA0319L
AASS
DDR1
LBP
SCN5A
APOBEC3F
DMXL1
LMCD1
GLRA1
CD99L2
PSMD9
HPD
CSAD
ZNF740
ETS1
CCBE1
SHISA5
TREX1
SACM1L
APOBEC3D
APOBEC3C
TCAF1
ACVR1
CXADR
EXOSC9
MED25
FUZ
KDM2B
LHPP
SAMHD1
TUBB2A
GRK6
DEFB113
DEFB114
TRIB2
PRICKLE1
CER1
MFHAS1
FADS3
SLC39A8
GLI2
CNPY1
TRIM24
DDX17
HSCB
CHEK2
PTMA
LDB2
AGK
HESX1
FGFR2
ZNF608
FAR2
GAS1
HSPG2
GMCL2
GLT6D1
TEKT3
PXMP4
GTF2I
GSG1
BTG2
PGAP3
ERBB2
ZFHX3
ATF4
MIEF1
RFX4
SEPTIN5
FAM24B
SDK1
TOMM40
TSKS
AP2A1
NADK
LIPK
PLA2R1
SNRPN
KIAA0895
ZNF536
SLC2A14
CACNA2D1
MDN1
KNDC1
NRXN1
PCNX2
CAPZB
ZCCHC3
C20orf96
LFNG
ANKRD10
CNN3
SORBS2
MTHFD1L
PRKG1
TGIF2-RAB5IF
TGIF2
ZNF296
GEMIN7
ZNF304
SCAF4
PSORS1C2
SGMS2
COL17A1
CREB5
GABRQ
GNAI2
ZSCAN2
CITED2
TDGF1
LRRC2
DOK7
ID1
KCNJ1
MSR1
MFSD4B
ZEB2
COMMD7
LRRTM4
PRR15
ICMT
HES3
GDF11
HMOX1
NDUFB5
MRPL47
SOX13
ITGB8
NXPH2
CRLF2
CLEC5A
RASGRF2
DNTT
CARHSP1
HGS
ARL16
ADA2
USP44
SMIM3
EBF2
ZSCAN10
MYSM1
SULT6B1
CEBPZOS
TBC1D14
RASIP1
IZUMO1
FUT1
FGF21
RTN4
PHAX
ALDH7A1
MAST1
RTBDN
PRDM14
FOXD1
SLC46A1
RPL17-C18orf32
RPL17
MTRNR2L8
CD2BP2
ZNF428
SRRM5
UFD1
CDC45
RCN1
GSX2
CDC14B
ZFC3H1
THAP2
NDUFS5
PGBD5
CTDSP2
TNFSF8
S100A16
ZNF668
SMYD2
CCAR2
C8orf58
FZR1
FAT1
ZSWIM3
ACOT8
CELF3
RIIAD1
TESK2
MMACHC
CCDC163
SALL3
CARM1
WFDC8
TSPAN5
NRARP
ZNF18
FAM126A
DMRT1
SEPTIN9
NECTIN1
NUAK1
CRH
LRIG1
ALDH1A2
SRCIN1
SMC6
GEN1
KCNMB4
CCT2
SYNDIG1
GPATCH8
IER5L
ROR1
OR2AT4
PDPN
C1orf100
GET3
SMN2
SMN1
CD200
PHETA2
NAGA
ADGRD1
TCF20
TRAPPC8
KIFBP
WDR49
TLX3
TLL2
GADD45G
BCL2L1
FGD4
PBX2
GPSM3
PYDC5
IFI16
BIN2
SGK1
MYCL
RAX
TFAP2B
TBC1D1
PYGM
CLEC2L
CDYL
PCBP1
FXYD7
CD24
SMIM32
AEBP2
CHRNA1
TPH2
GDF3
ATP6V1G1
GALNT3
ONECUT2
ARAP3
NRG1
EXOC7
MCF2L2
ARSD
LCA5
DST
PIF1
FRAT2
MAP6
BBS7
NFE2L1
SGPP2
CTNND2
FBXL19
CHFR
TRIM13
ANK2
LRRC47
IFITM1
IFITM2
IFITM5
DEFB110
PHLPP2
CNMD
DYSF
SUCO
RAB30
PLEKHA1
LMNA
CNOT11
MEX3A
P2RY12
CTPS2
FYN
LLGL1
URGCP
URGCP-MRPS24
BUB1B
PDHA2
SIN3A
CSRP2
HHIP
HIP1R
TCF4
CSTL1
CST11
TTYH1
RBFOX2
SHANK2
FAM153B
CSF2RB
DUSP29
YLPM1
KLF3
ZNF781
SDCCAG8
CEP170
HOMEZ
TRIM5
TRIM22
PPP1R3B
TMEM63A
LEFTY1
DPH6
BZW2
ANKMY2
LARP1B
EPHB3
BRINP2
ASTN1
C7orf57
KCNMB1
SUN3
PTBP2
ETV1
CHN2
USP7
ZNF195
CPVL
DCAF4L1
SLC30A9
ABCB5
BTBD10
ERMN
MMP10
TRIM39-RPP21
TRIM39
KIAA1522
QSER1
LRAT
SDCBP
RNF213
CARS1
SLC6A8
PNCK
MAMDC2
ITGB5
SLC34A1
PFN3
FRMD4B
UNK
H3-3B
FZD7
TRNP1
FSTL4
FBXW11
KCNA4
FRY
ACSM6
B3GALT5
RAD54B
FSBP
LEPROT
LEPR
DRD1
ZNF763
GCLC
TBC1D16
PLN
ETV4
SYNDIG1L
TRIML2
NUAK2
NOXRED1
LEFTY2
PROX2
NMNAT3
PES1
TCN2
ASMT
CELSR3
TKT
EYA1
CTSF
SPG21
LINGO1
PSIP1
FUS
LEKR1
NFE2
STN1
ATG10
KMT5C
COX6B2
KLRC1
ARHGAP42
ETFB
CCDC124
MAP3K12
TARBP2
NPFF
SCARB1
AKIRIN1
CCDC88C
KBTBD8
LIX1
QPRT
PRPS1
PMEPA1
APELA
AJAP1
PCDH1
KCNN2
KMT2B
CYTH2
ACSL6
ACCS
PAN2
IL23A
PILRA
MSANTD1
LAPTM4B
HECW1
DDX46
BCL9
ESRP1
KCNIP4
RBPMS2
SASH1
FOXI3
RTP4
PPAT
PAICS
FAM107A
SMIM14
PAK3
DNMT3A
ETNK2
GJA1
PXDC1
RAB11FIP1
MEIS3
SLC16A13
SLC16A11
ESRRA
CATSPERZ
WDR33
PIGH
CSGALNACT1
PCBP4
GPR62
KNTC1
AHNAK
ARF4
COL12A1
GSN
CCDC85A
GABRB3
TEAD1
ZNF775
SLC2A12
FIBCD1
CAVIN3
FAM227B
GSAP
SLC33A1
RNF186
ARHGAP22
SH3BP4
GPR146
LHX2
RHOBTB2
ZNF251
CDX1
DUX4
ZNF518B
RAB3GAP2
ST18
NRROS
TRPM1
CD4
FZD8
BORCS6
ZNF506
SHKBP1
VCAN
AMN1
PHC2
GCSAM
NEUROG3
ZNF77
SOCS5
PACSIN2
PDCL
GPR31
RASAL2
AQP2
ZNF317
AQP5
OR7G3
PHTF1
OBSL1
INHA
SPATA22
GHRH
CPS1
BEND7
WNT6
DDX43
TJP2
BBC3
PLCH1
SLC2A10
ZDHHC14
ZNF474
PAXIP1
C1orf127
ADAMTS9
OR6A2
PLEKHB1
SFXN5
FAM110D
PLSCR4
REV3L
OLFML3
RAB15
YPEL3
TBX6
MUC3A
FABP6
C1orf167
HMCN2
ARSG
SLC16A6
KDM2A
INO80C
GUCA1A
ADAMTS1
ZNF665
ARHGEF19
GPR150
PLA2G3
AASDH
EGR3
PCOLCE
MOSPD3
LMX1A
SENP2
KDELR1
GRIN2D
SRSF7
NFAT5
RARB
SF3B5
PAIP2
PANX1
CHD9
PARP16
DPPA4
WDR36
ADAMTS10
TEX50
FZD2
ACSL1
ZNF101
ATP13A1
ARMC3
TYRO3
ITPRIP
SMAD3
ZNF664-RFLNA
ZNF664
CCDC92
TMPRSS15
GALNT18
POLL
DPCD
CLEC19A
BEND3
ST6GAL1
CNKSR3
SUFU
ACTR1A
ART3
TMCC1
DGLUCY
EMSY
GRAP2
CCDC90B
PDHB
WEE1
CDH10
TCP11
SLC25A11
RNF167
PFN1
GP1BA
RARG
ITGB7
SDE2
CCDC33
GCNT2
ZNF202
FOXA2
UQCRHL
SORT1
VENTX
UTF1
TMEM31
ZBTB8OS
RBBP4
PAK4
CDH18
CPA2
DACT2
ZNF484
EPB41L3
FAM155A
NOTCH1
RIF1
PSME3IP1
RSPRY1
GOLGB1
PLEKHG5
PTGS1
ARID3B
RNF19A
EBF3
EXOSC2
BFSP1
NDST1
RAPGEF5
CDKN1A
ARMH4
SLC25A48
CXCL14
HOPX
LRGUK
CACNA1S
ASCL5
STEAP3
NRCAM
CSNK1E
C18orf25
ARID2
MOG
RPL27
IFI35
PLEKHG3
SPRY4
TGIF1
SPRYD4
MIP
PRR14L
DEPDC5
LIMK1
L1TD1
WASF1
CDC40
DVL2
RPL21
PHF23
GABARAP
ELP5
CTDNEP1
NACC2
PTPN2
COX8A
TSGA10IP
DLC1
S100A7
FBN2
MAD2L2
DRAXIN
AUH
FMNL3
TFAP2A
TRDMT1
SLC38A3
LMOD1
CDON
SNURF
ADAR
PPP2R5A
PDIA4
SMPD1
MSANTD4
C6orf132
PRICKLE2
CDK2AP1
FEZF2
OAZ2
SCOC
CRYBG2
CCDC54
KIF26A
FOXD3
LPCAT1
KLKB1
RNF144B
INTS9
HMBOX1
CDK17
TTF2
RNF24
BCL2L14
ZNF436
CAPRIN1
PPEF2
MAGEB2
MICAL3
ZNF35
TFE3
UQCRQ
GDF9
LEAP2
SGCA
ZNF532
ARIH1
ZBTB45
TRIM28
ZAP70
DPYSL5
MCM10
LOC107986453
CELA1
SNX19
ETV6
LRRC70
PYGO2
PBXIP1
LOC101928120
SEMG1
TOP2A
TMED7-TICAM2
TMED7
GET4
TES
KDM3A
SYT12
MRPL20
PCDHB9
PCDHB16
PCDHB8
PCDHB7
HEY2
TRAPPC3
MAP7D1
IDNK
TMC5
NRIP2
SPAG11B
SPAG11A
DEFB104B
DEFB104A
DUSP12
OPN5
JAK2
RNASET2
TUT1
MTA2
SAXO1
RRAGA
ATP5F1E
FRS2
TUBB1
MTM1
RGS3
SVOPL
GSPT2
KRT6A
ZNF3
COPS6
INO80D
GFPT2
COBL
UBD
NODAL
HTR1A
PDCD6IP
ABCC2
RAG2
IFTAP
ARF3
WNT10B
ZYG11A
CA6
ARHGEF4
OR51H1
CRYAA2
CRYAA
SH3GL3
GNA12
RNF220
UNC13B
TRPM3
LRRC8A
KYAT1
DUSP15
ESR1
CFAP298-TCP10L
CFAP298
KCNAB2
CCDC30
SAMD8
DUSP13
RCAN3
SHF
ATP6V0D1
AGRP
SLC25A36
DTX2
RSPH14
RAB36
VMP1
PTRH2
POU3F4
RBP3
HDAC2
RTKN
ACOXL
TIAL1
NRL
PCK2
ALPL
SYNPO2
ZNF438
LRMDA
SDC4
SALL4
FOXP1
SH3GL1
CHAF1A
ZNF572
CANX
ILF2
NPR1
N4BP2L2
PCYOX1
RBM20
TIA1
AMOTL2
MAP3K9
XYLT1
DPP10
CST1