ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX702105 | hESC derived mesendodermal cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◣ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

REST
TMPRSS11E
METTL11B
TCF7L1
PLAGL1
SPRED2
CDX2
CLDN9
CLDN6
MFSD4B
SERINC5
MTHFD1L
NTRK2
SOX2
SSB
NR5A2
PPP1R16A
FOXH1
SFRP2
HESX1
SACS
ATP1A4
SMPD1
MTRNR2L8
ZNF483
ARHGEF38
MUC4
CD82
LEFTY2
VENTX
UTF1
SMARCA2
CARHSP1
NRARP
AGO1
GAS1
FOXA2
MUC1
SMAD7
ZSCAN2
PSMD9
HPD
HOXB1
FAM227A
CBY1
TMEM63A
LEFTY1
FAM222B
NES
MTF2
APBA2
HHIP
BCOR
TERF1
CADPS
POU5F1
LIN28B
DACT1
SOX6
TNNI3K
RNF220
KLHL7
CCBE1
NRG1
RNASE6
EDDM3B
TBC1D16
SHCBP1L
PHC1
MDFIC
FOXD3
DUSP6
ARID2
SEMA6D
DPPA5
RPH3A
CACHD1
ZFHX3
DHDDS
SHC1
FLAD1
CKS1B
HMGB1
CER1
SCN5A
ATP8A2
ANXA2
FZD2
RAX
CD99L2
IFRD1
DNMBP
MAMDC2
BDH1
SLC7A5
TRIB2
KIF21A
FGF1
SOX21
SLC46A1
ANKRD1
GAD2
LRRN3
GNAI2
FAT1
GDF11
HSCB
CHEK2
TENT5B
PCNX2
GLI2
GSX2
HBG2
HBG1
GNAI1
PRICKLE1
ZNF436
ETV4
CNPY1
OR5AR1
EBF2
TNC
TALDO1
PRDM14
SOCS3
NMNAT3
NAA50
ATP6V1A
LEMD2
NAV2
SH3GL1
CHAF1A
SRRM4
FGF2
USP44
FOXD1
PIPOX
GIMAP5
OBI1
COL12A1
RMND5B
GLYATL1B
LHPP
DDX46
ADNP2
SNRPN
PTPRN2
GAST
ZNF674
DEFB113
DEFB114
ZNF608
TJP2
REV3L
LRRTM3
TNRC18
LOC100129484
AKIRIN1
DOK7
PSIP1
KNDC1
HDAC9
LRRC10B
RASGRF2
SAMD5
CITED2
TARS1
MFHAS1
DNMT3B
GRK6
DDX3X
DUX4
FZR1
ALDH1A2
URM1
GLRA1
KCNIP4
VOPP1
RFX4
NEUROG3
HAS3
GBX2
SLC36A2
TFAP2A
TRAPPC8
PGAP3
ERBB2
FLVCR1
SPATA45
C9orf85
TCF20
MED12
IL2RG
C1orf100
PPBP
PF4
KIAA0895
CDH18
BTG2
CACNA2D1
FRY
SLTM
LRRN1
MTRNR2L2
MSH3
DHFR
ETS1
BFSP1
RIPK1
SHISA5
TREX1
SCARB1
SAMHD1
FGFR2
PLPP2
LOC102724770
DGCR6
FRG2C
LFNG
NDUFB5
MRPL47
ID3
RPGRIP1
ZBTB8OS
RBBP4
APOBEC3F
PTMA
GOLGA6D
PIM2
COL17A1
MTRNR2L1
SGK1
ID1
ITGB8
FRG2
ANKRD10
LMCD1
TDGF1
MED25
FUZ
ZSWIM3
ACOT8
FAM174B
LRRC2
SMCO1
NOTCH1
DMXL1
GSN
FBXW11
ABHD17B
NANOG
UGT1A6
DDX17
KRT31
RNASET2
LZTS1
SCGB3A2
ETV1
TRIM2
PMEPA1
KDR
CBFA2T2
CELF3
RIIAD1
ZNF775
ZNF398
MRPL20
NADK
BCL2L1
FGD3
FGD4
NFE2L3
ART1
DDX43
HOPX
VCAN
ITPRID1
GOLGA6B
KIF5C
ENSA
WFDC8
TUBB2A
NRCAM
ZNF343
NCDN
KIAA0319L
CYP1A1
PPP1R16B
LDB2
COL23A1
GOLGA6A
PHF5A
ACO2
RCN1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
GADD45G
RPS24
DAGLB
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
GPRC5B
C1orf127
TRIM24
ICMT
HES3
FAM120B
CSAD
CDC14B
LCA5
MYSM1
LY96
FZD8
PRKG1
ZNF740
KMT2B
FBP1
LIMCH1
IL34
PBX2
GPSM3
IQCH
AAGAB
SYBU
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
PALM2AKAP2
SNURF
CYTH2
PUF60
MKRN1
ZBTB40
CYP2S1
GCNT2
ESRP1
MCCC1
PHLPP2
PSMG3
FOXP1
SOX5
TMCC1
ATF4
PER2
FBXL19
LINGO1
FRAT2
RIF1
SLA2
CDC42EP3
KIFBP
MMACHC
CCDC163
DLL1
MRS2
STN1
NFE2L1
SGMS2
AMN1
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
ZEB2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
CRH
HGS
ARL16
MIEF1
WDR55
DND1
RASA1
ECE1
ZFC3H1
THAP2
MDN1
NLRP12
SNAPC3
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
LIPK
SLC35A5
CRYGB
OR5K3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
DDR1
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
CAPRIN1
MAD2L2
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
EEF1A1
CD24
DGLUCY
DUSP29
BEND3
DPH6
UQCRHL
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
EAPP
MORF4L2
PIN4
CA6
TCF7L2
FAM180A
AASS
CPA2
HMOX1
BICD1
TGIF2-RAB5IF
TGIF2
TPH2
ONECUT2
KCNN2
WEE1
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LRRTM4
LIN28A
ARIH1
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
TTYH1
NEBL
SRCIN1
FGF12
TIMP4
CNN3
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FEZF2
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
OLFML3
PARP16
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
PGPEP1
RTN4
KLF5
ATXN3
GCSAM
PHRF1
ADA2
TRPM1
PPEF2
STK31
SERPINA1
ZNF781
IFT80
KIF6
ZNF304
CHN2
BOD1L1
PSME3IP1
DENR
CUEDC1
DST
TMEM167B
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
SENP2
CRYAA
CRYAA2
UBQLN4
LAMTOR2
TPST2
USP7
RBFOX2
PAK1
ABO
ANKRD6
KLHL6
RASAL2
NDST1
PYCR2
SYN3
WDR49
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
SEPTIN9
PGK1
DSP
SPIN1
SLC20A2
AHCYL2
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
SMN2
SMN1
SINHCAF
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
ADAR
MAST1
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
CCDC200
ANKRD35
CAPN3
STRA6
PITPNM2
OAZ2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
KCNMB4
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
FYN
FOXI3
TMEM47
NEUROG1
EPHB3
NDUFV1
NUAK2
ZNF536
MUC3A
RTBDN
PACSIN2
PDIA4
NEDD9
ROR1
NUAK1
C1QTNF7
PHC2
HES1
APELA
FAM24B
ZNF296
GEMIN7
CCN2
RBM22
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
NECTIN1
MYCL
ARID3B
SIX2
FZD5
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ADGRL2
ZNF195
ESR2
TAF13
CFLAR
TMUB2
URGCP
FUS
TIAM1
INSM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
PDE1B
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
TCF4
TRIM28
OSBPL1A
ERVH48-1
ST3GAL6
EYA1
DIDO1
ATXN7
CST1
FAM219A
DNAI1
FAM107A
CCN3
CXADR
SLC33A1
ETV6
MARCKS
TSPAN13
FOXO6
CCL26
CERCAM
GID8
MVB12A
ZBTB18
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
NDUFAB1
CLPB
SMIM14
TSPAN14
PRKAG2
INTS9
HMBOX1
KANSL1L
SLC25A36
TUT1
MTA2
ZNF649
MSANTD4
ZNF565
NPSR1
SYNDIG1
DPPA4
AGK
SDK1
SLFN12
RAB15
ERMN
TEAD1
TCP1
MRPL18
LBP
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PDK1
NMNAT2
BCL9
SOX13
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
TMEM132B
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
FAM227B
DISP3
TNS3
PRTG
URGCP-MRPS24
SLC23A2
PLA2R1
TFE3
TET3
STOX2
MAGEB2
CDH10
TMEM43
DICER1
CHCHD4
SHANK2
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2
PSEN2
TJAP1
MBD4
IFT122
AFAP1
MTHFD1
MMP10
UHRF1BP1L
LRAT
NUP160
SLC2A8
TLE1
COL4A2-AS2
BST2
KRTAP3-2
DUSP1
RASSF8
NBPF20
SPHK1
ENKUR
WDR36
RNASE9
ARHGAP42
CEBPZ
ESX1
POLDIP3
ZSCAN9
BIN2
FAM20A
PCYOX1
SLC16A13
SLC16A11
RAPGEF5
ZP2
ABCC10
PCDHB5
FAM153B
TNRC6A
PKIG
FMN1
OR2T1
OPN5
KLF6
RIC8B
SORT1
IFNE
SPATA22
WDR74
STX5
G3BP1
ABLIM1
HNRNPA3
RABGAP1L
CRLF2
MEX3A
CFAP20
ADGRD1
S100A16
ZNF428
SRRM5
LRRC47
ZMAT2
PARN
BFAR
MBNL1
RNF43
BORCS6
MEIS2
HSF2
SFRP1
MPP2
LGALS8
CRISPLD1
MBNL3
SELPLG
FBXL14
SSUH2
INO80C
MEF2C
TAF12
PDGFA
LRTM1
DTNA
GALNT18
MAP6
ACSL1
NKIRAS2
TNFRSF6B
PDE4D
PIK3R3
SLC2A11
OGA
CSF2RB
BRINP2
ASTN1
NXPH2
NEK6
YIPF4
PREP
CNGA1
TBC1D1
PDHA2
SPIRE1
TRIT1
KRTAP3-1
ZNF90
NXPH1
STMN1
RUNX1T1
PLPP3
ABCC2
CPT1A
MSI1
HSPH1
LIFR
REEP6
PCSK4
PAX6
CCDC85A
GNA12
GPC4
DPP3
TRMT2A
RANBP1
C5orf60
SLC6A8
PNCK
NTF3
FAM110D
RMND1
ARMT1
BTBD11
ADAMTS16
ZNF202
SACM1L
IRAK1BP1
PIK3C2A
SAV1
GALNT10
GUCY2C
TOX3
LRGUK
CP
ZXDC
ACOXL
BBC3
CRTAM
DACT3
ADAMTS18
PINK1
KHDRBS1