ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852813 | LK-2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◣ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
SRP68
ANKRD35
LFNG
PPP1R2
KRT31
LGALS8
ARID2
GABPB2
CELF3
RIIAD1
PLPP2
CCPG1
C15orf65
NTN5
PTMA
TES
NAV2
PIPOX
RORC
C2CD4D
NOTCH1
PYM1
DGKA
GALNT10
ZMAT4
CEP20
RPGRIP1
ITGB8
ANKRD33B
LRP12
SMCO1
SEMA4D
FAM227A
CBY1
MTF2
WFDC8
CTNNA1
LRRTM2
GGH
ARPIN-AP3S2
ARPIN
NTF3
ZNF335
NKD2
CUEDC1
GRK6
PXYLP1
CDX2
CLUAP1
C16orf90
TSKU
BTBD11
HDAC4
SH3BP4
IL21
CDH18
VWCE
UGT1A6
RNASET2
NFIB
KIAA0040
HGS
ARL16
TTC39C
CADPS
MATR3
TMCC1
ANKRD6
ECT2
TMPRSS15
ERVH48-1
GCNT1
ZSCAN2
SOX21
SNAPC3
PRR15
PER2
VWA2
IFRD1
GPR171
TARS3
DSP
ZBTB45
TRIM28
FMN1
MRPL36
NDUFS6
PDIA6
DCSTAMP
LSM5
AVL9
LOXL3
DOK1
ID2
SDK1
LMCD1
PLEKHG1
PLCH1
SYBU
NDUFB5
MRPL47
SERINC5
ANKRD10
LINGO1
TASP1
CPLX2
NMNAT2
ERG
ZNF775
POLR1F
LPP
CDK5R1
MED25
FUZ
ZNF750
HES1
HMGB1
MYO5C
MUC1
DAAM2
EPHX1
GSN
ODF4
CCT2
HMGN1
KIAA2012
USP3
CLDN14
YEATS2
TBX4
SDC1
CCL24
MYEOV
EPHB3
ESRRA
CATSPERZ
EPHX3
LRP11
SINHCAF
NPIPA8
NPIPA7
CHSY1
RNF217
UAP1L1
SAPCD2
PPP6R3
KCNN2
IL17RD
KLHDC8A
SIPA1L2
TFEB
PGC
EPYC
STK31
LRIG1
HES5
PANK4
SIX2
CBFA2T2
SRGAP1
GSTP1
VASH2
APP
SLC20A2
KDM2A
SEPTIN9
GEMIN4
C1QTNF7
BCL9
LTK
TNS3
CCL26
CRYGD
ALDH1A1
CRYGC
ESYT3
ETV3
MARCKS
MAPRE3
SLCO5A1
IQCH
AAGAB
SLC12A7
CEMIP
SH3GL3
SNX27
KMT2B
BMPR2
ZDHHC3
EXOSC7
ATP8B1
AUH
ERMN
SPDYE14
SPDYE10P
DPYSL3
TTPA
UPF1
TLR4
CLEC4F
CYP1A1
SACS
FGFR2
VIT
H3C15
H3C14
H4C15
H4C14
LTBP1
LOC100506422
SYNCRIP
CLDN11
AKIRIN2
TGIF1
RAB23
HDAC9
PCYOX1
WDR33
TIA1
RYK
ADI1
KLF7
NEBL
HRH3
KRT8
TM4SF1
TMPRSS7
ITGB3
ATP8A2
THOC3
YWHAQ
TNFRSF11B
COLEC10
CCDC57
PTGR1
FBXL19
MUS81
CFL1
RBM48
PEX1
SLC26A9
NPIPA1
POU3F2
LYPLAL1
ADCY10
TJP2
DNAJB1
TECR
HSF2
CTSK
CYP24A1
CCDC38
AMDHD1
TGFBI
PTP4A3
POLB
SPRY4
SYNE2
QKI
ETV1
ST7
SEM1
LY6G6F-LY6G6D
LY6G6F
MPIG6B
LY6G6C
LY6G6D
WDR3
GDAP2
KIF21B
ADGRD1
HAUS5
TRMT12
HAO2
DUSP1
DHX8
BCL2L1
ARIH1
STAU2
MACROH2A1
SOX2
SLC25A12
CEP85L
CYTH2
FGD6
VEZT
SLC25A36
MSANTD4
CHN2
MPP2
CPVL
USP54
ZKSCAN1
MYOZ1
EHD4
ZSCAN10
ERCC4
NBPF26
METTL11B
SGPP2
SLC2A8
TLE3
TMEM132A
HOXA9
HOXA10
HOXA7
DDX17
NEK6
CCDC3
POGZ
ST6GAL1
MFGE8
CALHM4
ESRP1
MANSC4
KLHL42
OAZ2
CBX1
LHX5
SNX11
HNRNPLL
ZDHHC5
CLP1
LRATD2
ASPSCR1
WIPI1
NOTUM
STXBP6
CRISPLD1
MPZ
SDHC
CATSPER3
PHB2
CREB3L3
FOXJ3
ST3GAL4
CD46
GAL3ST4
STAG3
GPC2
SMIM35
TMPRSS4
ABL2
RNF20
NUP153
PDE4DIP
GTF3C3
C2orf66
PRSS23
CLIP4
CSRNP2
PHF5A
ACO2
DOCK9
GBX2
HAUS6
PPIA
H1-7
ZSWIM3
ACOT8
ZNF687
MAT1A
HNRNPDL
ENOPH1
PDIA4
TMUB2
RGS2
SLC16A13
SLC16A11
MKRN3
HTR1A
MTURN
EPAS1
MYC
PMEPA1
POLI
ONECUT2
SMARCA2
NADK
FOXJ1
FGF19
COL14A1
ANGPT1
RSPH4A
COA8
BAG5
HES6
TAGLN2
ELAPOR1
C1orf194
RPIA
DNAH6
BNIP5
CPA5
BAHCC1
TBL1XR1
ODC1
LAP3
UBE2G1
PXDC1
FURIN
NIBAN2
DNAJC6
KRTAP8-1
TRAK2
STRADB
SLC25A48
CXCL14
PSMG2
CEP76
SRRM4
ANKHD1-EIF4EBP3
ANKHD1
BCL2L11
SC5D
CPSF4L
CLEC9A
SOX14
ARHGAP8
CYREN
GSTM5
ALDH1B1
CRLS1
DAGLB
SLC2A11
DERL3
MTDH
TRPC3
ZFC3H1
THAP2
JUP
HSD3B1
TEK
PPDPF
CLOCK
SHF
TNFAIP2
JADE2
RAB30
LAMC1
LMO3
ATXN1
CIT
ZBTB8OS
RBBP4
REG1A
APOBEC3F
CTTNBP2NL
NARF
CYBC1
TRIB1
CDKAL1
KLHL24
FGD3
SLC33A1
NUP160
BORCS6
KRTAP6-3
KRTAP22-2
ADRA2C
TIAL1
SLC25A25
ATP6V0D2
ZNF304
WIF1
EYA1
RBM20
MGST3
KIF6
TNFAIP3
TENT5B
ZNF358
MCOLN1
LPAR6
ZNF608
CPT1A
ARID5A
S100A2
H3C8
H2BC10
H4C8
LRRC69
CELF2
SF3A2
PLEKHJ1
DDX58
APOD
KCNE3
LIMK2
EXOSC2
CLCN3
UCK2
NEK1
MEX3D
TMEM17
USP35
KCTD21
DISC1
ANK3
C2
TMEM205
CCDC159
RAB3D
ANKRD44
MBLAC1
TMEM128
ID3
TUT1
MTA2
VGF
TANC1
NACC2
RABGEF1
TGM3
ALDH3A1
ZNF428
SRRM5
SYTL2
GADD45A
MTHFD2
CLIC5
CLRN3
CHD6
RNF43
PBX2
GPSM3
IBTK
LY75-CD302
LY75
TNRC18
LOC100129484
UBQLN4
LAMTOR2
HEBP2
RIMBP2
IGF1
PGK1
NEDD9
DDX43
FGF12
GDF5
CEP250
PPP1R12B
MCM7
AP4M1
ARFGEF1
UBE2T
GPR1
PSMG4
FAM120B
DLL1
PTHLH
HIP1R
ANP32E
TUBB2B
LIFR
FNBP1L
MRO
MTA3
GRIK3
KCNG3
SH2B2
NRCAM
ITGB4
L3MBTL4
MNT
TBC1D16
FMNL3
ZNF77
EIF4A3
CCDC40
MSRB3
NHSL1
OPN3
CHML
MCCC1
C1orf100
MANSC1
BORCS5
TNFSF15
DNAJC21
BRIX1
DMRTA2
GADD45G
APBA2
SPHK1
CELSR3
LPCAT4
S1PR3
ATP5PD
C9orf47
LRRC30
EPB41L4B
TMEM68
TGS1
CDC42EP3
PIF1
SLC2A4
TSPAN13
LRMDA
NCOA4
DLAT
UGT1A4
UGT1A5
NEDD1
HMOX1
MDM4
ROPN1B
CLK3
PSEN2
GRAMD2A
IGFL3
ETV6
SH3PXD2B
SNTB1
PTPRO
DDC
STN1
CRYGB
BEST1
FTH1
AFAP1
LOC389199
MEGF9
WDFY2
SAXO1
RRAGA
FGFRL1
PDIK1L
ERV3-1-ZNF117
ERV3-1
MALL
ZSCAN9
KRT86
HERC3
SCN1A
CLDN12
SEC16B
KIAA1671
TPD52L1
CEMIP2
SH3PXD2A
RPTN
GTF2IRD1
MUC4
FGD4
UNK
H3-3B
CSK
LGR6
ZNF277
DOCK4
DLX5
MFSD6
WSB2
UCP2
ZNF184
GABRR2
KLHL25
MAEA
LAMTOR1
ANAPC15
CNP
PRDM2
GIMAP5
PCDHB9
PCDHB16
PCDHB8
PCDHB7
IL22RA1
STK32C
LRRC27
PCTP
B4GALT1
INSM1
USP6NL
KIF23
PARVG
ZNF273
KIZ
SOX9
ZNF180
SYNE3
ZBTB6
RC3H2
EIF3E
RDH16
UNKL
THEM4
BAZ2A
ATP5F1B
DCPS
CDR2
RFX5
ZCCHC3
C20orf96
WEE1
HACL1
BTD
TUBB
MDC1
TRPM1
KNTC1
PAN2
IL23A
SOX8
LMF1
H3C6
H2BC8
H2AC8
H1-3
ETV5
CCT5
CDC27
SELE
CALN1
OAS1
LRRC72
PLLP
TLX3
LDB1
ZCCHC12
THEMIS
ZSCAN31
MAP4K4
ID1
LYPD6B
CCDC33
H2AZ2
YPEL1
ZFYVE21
XRCC3
OR4C6
KLF6
COL4A2-AS2
TRIM13
TTC23L
CC2D1A
C19orf57
SLAMF8
TDGF1
SYT2
EMSY
MIDEAS
SRSF7
FOXO6
PTX3
GPX6
TOMM40
BTG1
PSMB7
PPP1R1B
RFX8
TUFT1
CADM1
VAV3
SLC7A1
SLC34A1
PFN3
ZNRF3
ATAD3A
RNF157
KIF2A
ZC3H7A
OR52N1
GLI2
TLN2
ANXA2
CSRP2
BAZ1B
SCRT1
TUT7
PROSER2
ADAMTS19
TPRG1
ZNF195
MAML2
PPARGC1A
LMOD3
TTC28
NR5A2
NKIRAS1
NEFH
RPL15
USP22
BBS7
NID1
GLRA1
DPP3
CENPX
LRRC45
CCDC88A
NOTCH2
CEP68
SIRT7
PYCR1
MAFG
CITED2
ADRM1
SDHD
SYT7
ZBTB38
ZNF106
SNAP23
NEURL1
ACTB
FKBP9
BRINP2
ASTN1
ZNF117
SPATA12
STAT3
EMP2
WIPF1
RNF145
RNF38
SCN5A
LIMCH1
MIDN
ATP5F1D
DDB2
URM1
ZNF250
C1orf54
CD36
CIART
BMERB1
PRUNE2
FAM136A
ANO1
PPFIBP2
ACVR1B
KLF9
LZTS1
CCDC144A
LMO4
VTCN1
ARHGEF38
SLC66A2
HSBP1L1
RRBP1
KLHL2
GREB1
TNFAIP8L2
LMO2
ZNF107
SEMA6C
MGAT5B
FOXD1
ARHGAP42
LNX1
PWWP2A
PLEKHG4B
PCED1B
AMIGO2
VOPP1
CD24
NFE2
RBP1
KCNJ15
ZFP62
TCF4
USPL1
FMNL2
CDK5RAP2
POLR2M
RAB11B
FAM91A1
KCNK1
WDFY1
DPYSL5
TAX1BP3
EMC6
FIGLA
NTMT1
C9orf50
HNRNPAB
CTIF
GOLGB1
SLC1A3
KCNA6
PRKX
ELK3
SASH1
SLC9A2
MAST4
C8orf76
MNX1
LRRK1
TMEM211
NKD1
COL17A1
HSPA13
PDP1
PSMA1
DUSP7
PDE3B
LGALSL
PNRC1
EIF4A2
TRMT2A
RANBP1
OARD1
NFYA
CARMIL1
MRLN
POC1A
DIO2
C2CD5
NAXD
FSCN1
FAM76B
CEP57
HECTD4
NAP1L4
HDDC2
ADAMTSL4
RFLNA
SLC25A11
RNF167
PFN1
GP1BA
PPME1
C2CD3
SNCA
SHQ1
EXPH5
TAF1A
MRPS2
C9orf116
CDCP2
TLE1
BARHL2
PLS1
ZFP69B
BMT2
PPCDC
GPER1
XRCC5
ST6GALNAC1
NR2E1
AGO1
DST
TOMM40L
APOA2
CCNJ
MRPS18A
CTLA4
ATRX
SGIP1
PARP16
STMN1
ZSWIM4
NELFCD
EID1
SHOX2
RSRC1
SACM1L
FILIP1L
RERE
ARMC3
PON2
MROH1
WDR36
SDE2
USO1
UBR3
METTL5
DNMBP
NDUFS5
CASTOR2
POFUT1
PLAGL2
ADAMTS17
OSBPL1A
NOTCH2NLC
PLXNB2
H4-16
H2AJ
LINGO4
PARP1
KANSL1L
ZCCHC14
CDIN1
GOLIM4
WASHC3
PELATON
VCAM1
HOXC9
HOXC8
ZBTB2
SLC35E2B
TENT5A
YWHAG
CSRNP3
KCNMA1
BAG3
DMRT3
TESK2