ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX011616 | hESC H1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◣ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TRIM24
CADPS
SPRED2
SLTM
P2RY12
TDGF1
LRRC2
CITED2
PPBP
PF4
CREB5
KIF21A
FRAT2
LARP1
SF3B5
ARID2
LRRC10B
CAV3
C16orf46
PALM2AKAP2
TMEM70
LY96
LRRN3
HHIP
REST
CRLF2
CLEC5A
SOX2
EXOSC9
MRS2
ANKRD1
NECTIN1
SHCBP1L
SLC36A2
BDH1
SLBP
SRPK1
SNX19
PGBD5
SLC24A3
NRG1
SMARCA2
PHF3
MTRNR2L1
CCN2
CD24
PSIP1
PRRG3
PROK1
RPH3A
COTL1
ACSL6
NANOG
MID1
SMIM14
DPPA5
CNOT6
CCDC60
HOXD11
HOXD13
HOXD12
ANKRD36
CST1
SOX6
GDF11
C11orf58
SPARCL1
LRRN1
PHLPP2
ANAPC4
TNFRSF11A
CDH18
CACNA2D1
MIB1
CLDN3
TALDO1
GMCL2
TERF1
TMPRSS11E
MEIS1
NDRG2
TMSB4Y
TRIM16L
FOXO3B
SOX5
SOX13
SIX3
NRXN3
PRRC2B
KDR
GLIPR2
C1orf100
RAPGEF4
MEN1
MAP4K2
SYN3
GABRB3
SIN3A
GFPT2
AFTPH
ZNF692
SGK1
MAD2L2
DRAXIN
ITPRID1
MTRNR2L8
PRPF4
CDC26
PPP1R15A
FHDC1
PLAGL1
RNASE6
EDDM3B
TULP2
NUCB1
RAB5C
MTRNR2L10
LAPTM4B
BTBD1
CPNE4
LRRTM4
TMX1
TUBB2A
TMEM107
CACHD1
TTLL6
ARHGEF38
SMCO1
MTRNR2L2
MSH3
DHFR
SLC2A14
UHRF1BP1L
CSNK1E
RAD54B
FSBP
ABCA4
CCNT1
FZD8
RASA1
C1QL3
TWIST1
C4orf50
RAG2
IFTAP
ATG5
DEFB113
DEFB114
SCGN
SLC17A8
VWA1
ATAD3C
PTBP2
SGMS2
STAT6
MTHFD1L
NEUROG1
MEGF10
SLC22A16
MCC
SULT6B1
CEBPZOS
ZFYVE1
DPYSL5
STON1-GTF2A1L
CYP27A1
MBNL3
PLN
NXPH2
TFAP2D
CD82
ZNF781
ETV3
TPTE2
PXDC1
PPP2R5A
MYO1E
ZEB2
HEXB
DUX4
FGR
RMDN1
CRB3
SLC25A23
PRKG1
SDS
RCN1
EYA1
MMP24
PARP1
MDN1
TMPRSS15
PPP1R2B
FMO2
PDHA2
NFKBIA
KCNH1
MAN1B1
PITX2
SFXN1
CER1
RASGEF1B
OBI1
BMPR1B
IL24
UGP2
SGMS1
PCDH10
DSE
TSPYL1
ASXL3
KCNMB4
ADD2
ZYG11A
ZIC4
BCAT1
ZIC1
SLC2A12
BNIP3
OR6Q1
SOCS5
KLK11
KLK10
ZNF608
L1TD1
DLX4
USP32
CAPZA2
FBXW11
CHRNA1
NUDT13
ABRAXAS1
BCL2L14
BIN2
GBE1
TMCC1
POSTN
KLF5
TLE3
NGF
PPP1R16A
FOXH1
CTSF
WLS
FHIT
RUVBL2
GYS1
CORO2B
CDC42
KIF5C
SALL3
TRPM3
LITAF
COBL
MTRNR2L6
NSUN7
PLA2G4A
SLC25A16
SOX21
GLRA1
PRICKLE2
LRFN3
ITM2B
TAX1BP1
NCOR2
CASQ2
SHC1
FLAD1
CKS1B
CNN3
ATXN7
THRB
UBD
THOC7
SOCS3
MVB12A
BST2
GDF5
NR2F2
TBPL2
PGS1
RGPD6
SNRNP25
POLR3K
HCK
CWH43
FTCDNL1
ACCS
DDX46
FAM24B
RGS2
RNF144B
ILF2
NPR1
EML1
TMEM114
CRYZL2P-SEC16B
HIPK3
EFTUD2
CCDC103
CELA2A
PHC1
H2BC21
H2AC21
H2AC20
KLF4
CDH12
ICMT
HES3
OAZ2
FAM178B
CDS1
C9orf85
UQCRHL
MOG
MEF2C
LRRC7
ASB4
ERCC6L
BCAT2
WNT10A
DMXL1
GSN
NKX1-2
OTX1
INAFM2
MED12
IL2RG
UBE2G2
CNPY1
GCNT2
GUCA1A
ENOX1
HUS1B
TOX
ATP1A4
ETS1
TCF7L2
BICD1
GPATCH8
ATAD2
HLA-F
H4C3
BDH2
HFE
VCAN
TTC13
ADGRL2
ZFAND6
LRRC20
SH3KBP1
MED6
NTRK2
GAS1
HMOX1
PIM2
TNNI3K
MRPL20
COMMD7
PPP2R3A
ANGPT1
KCNAB2
IBTK
PTGER3
SPATA3
GPD1L
TMC5
PLAAT4
MEIS2
TP53RK
SLC13A3
PIGH
SMIM31
JPT1
LRGUK
PHF8
ANO1
TANC1
CRADD
ARHGAP6
TRANK1
HOPX
SORT1
FOXN3
ZNF281
PCDHA9
PCDHA10
CRH
FBXL19
GABRQ
FRMD3
GALM
MED13L
CCDC198
SLC6A11
FGFR2
CYP2S1
PLA2R1
NAA50
ATP6V1A
MBNL2
GPR85
CYP27C1
ZNF302
POLQ
NR5A2
NPIPB5
NPIPB3
NPIPB4
QTRT1
HMGCS2
SMTNL2
OR11H2
NEUROG3
ZBTB39
FGF1
OR13A1
OR2H2
CTBS
CLDN23
N4BP1
ARSA
CIITA
KDM7A
ECI2
RMND5B
RIF1
DST
PF4V1
CXCL1
LIPN
SCGB3A2
GNAI1
NEBL
TENT5B
DENR
NKIRAS2
DNAJC7
FRZB
BRDT
GID4
ATPAF2
PRDM8
SERINC5
RNF43
PGAP3
ERBB2
ANKRD36C
RP1
MUC4
GPRC5B
UPF1
MS4A4A
SLC25A28
TMEM14A
HSF2
HABP2
ZNF18
CBX8
C1orf198
HOXD1
ADAMTS8
ULBP2
IFNA1
GIMAP5
FAM174B
BUB1
FEZF2
ZNF438
RBAK-RBAKDN
RBAK
CASP7
AK4
RASGRF2
ARAP3
PRR5L
HSD17B4
COMMD9
P2RY14
HMCN2
PRTFDC1
LRAT
MFSD4B
SMPD1
ANKRD6
TOX3
CELF4
FOXP1
PANX1
DDX17
RNASE9
TM4SF1
LMCD1
ZAP70
CHRNA9
GRHL2
MAPKAPK2
CRTAM
PRICKLE1
TNRC6A
LIMS1
TOP1
ATP8A2
SIRT4
CFTR
RDH12
RDH11
ZNF532
GCSAM
CNMD
MRPS31
GLI2
SORBS2
TSPAN13
KBTBD8
CREM
LHX8
TSKS
AP2A1
PTPRN
OR5AR1
SLC2A10
ZSWIM3
ACOT8
BEND3
SPIRE1
PSMG2
SMPDL3B
KIAA0895
MFHAS1
MUSK
ENKUR
FAM20A
IDO2
ZBTB8OS
RBBP4
DSC2
NDUFAB1
NRARP
MTF2
LOC102724770
DGCR6
CDX2
FAM227A
CBY1
NES
NAV2
SACS
SMAD7
PIPOX
FRG2C
METTL11B
DNMBP
ZNF483
LFNG
GAST
MAMDC2
NDUFB5
MRPL47
MUC1
ID3
HMGB1
ZSCAN2
DUSP6
AGO1
RPGRIP1
URM1
TCF7L1
APOBEC3F
PTMA
HDAC9
RIPK1
GOLGA6D
FLVCR1
CD99L2
COL17A1
VENTX
UTF1
SFRP2
BCOR
FAM222B
TARS1
IFRD1
SPATA45
ID1
SRRM4
SSB
ITGB8
FRG2
ANKRD10
SNRPN
CLDN9
CLDN6
SAMHD1
MED25
FUZ
BTG2
POU5F1
GAD2
DNMT3B
GRK6
ZFHX3
NOTCH1
KLHL7
ABHD17B
SHISA5
PLPP2
TREX1
UGT1A6
GLYATL1B
ZNF436
KRT31
RNASET2
LZTS1
ETV1
TRIM2
HOXB1
HESX1
PMEPA1
CBFA2T2
CELF3
GBX2
SLC7A5
HSCB
CHEK2
RIIAD1
ZNF775
ZNF398
NADK
BCL2L1
FGD3
FGD4
NFE2L3
ART1
DDX43
PSMD9
HPD
TRAPPC8
ETV4
GOLGA6B
ENSA
WFDC8
NRCAM
ZNF343
NCDN
KIAA0319L
CYP1A1
PPP1R16B
LDB2
COL23A1
FZR1
GNAI2
GOLGA6A
SCN5A
LEFTY2
PHF5A
ACO2
SALL4
LHPP
GADD45G
USP44
RPS24
DAGLB
IER5L
FIGNL2
TEKT3
C1orf127
GSX2
FAM120B
CSAD
CDC14B
LCA5
LIN28B
MYSM1
FGF2
ZNF740
KMT2B
FBP1
LIMCH1
IL34
PBX2
GPSM3
IQCH
AAGAB
SYBU
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
SNURF
APBA2
CYTH2
PUF60
MKRN1
ZBTB40
TMEM63A
ESRP1
MCCC1
PSMG3
ATF4
PER2
LINGO1
SLA2
CDC42EP3
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
BFSP1
STN1
NFE2L1
SAMD5
AMN1
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
FBXO40
PYGB
MACROH2A1
FZD2
HGS
ARL16
MIEF1
WDR55
DND1
ECE1
ZFC3H1
THAP2
NLRP12
SNAPC3
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
WNT5B
ATG3
SMC6
GEN1
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
RFX4
SMAD3
PRSS48
ATG10
GJA1
ITGB3
SCAF4
DNTT
KDM2B
TRIML2
PHETA2
NAGA
DDR1
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
VOPP1
CAPRIN1
TNRC18
LOC100129484
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
SYT2
PDCL
VWCE
UNC13B
SH3GL1
CHAF1A
EEF1A1
ALDH1A2
EBF2
DGLUCY
DUSP29
DPH6
SH3BP4
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
EAPP
MORF4L2
PIN4
CA6
KNDC1
FAM180A
AASS
CPA2
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
ONECUT2
KCNN2
SCARB1
WEE1
GDF3
MTM1
SEPTIN5
ZNF335
MANBAL
FAM200B
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LIN28A
ARIH1
OR6A2
WDFY1
NRROS
PSORS1C2
SMIM32
TTYH1
CARHSP1
SRCIN1
FGF12
TIMP4
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FOXD1
MAST4
KDM2A
TIAM2
TMPO
OLFML3
PARP16
GPR31
WDHD1
SOCS4
ACVR1
ZBTB45
SRSF7
PGPEP1
RTN4
ATXN3
PHRF1
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
SERPINA1
IFT80
DDX3X
KIF6
TBC1D16
ZNF304
CHN2
BOD1L1
PSME3IP1
CUEDC1
PCNX2
TMEM167B
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
SENP2
CRYAA
CRYAA2
UBQLN4
LAMTOR2
TPST2
USP7
RBFOX2
SLC46A1
PAK1
ABO
KLHL6
RASAL2
NDST1
PYCR2
WDR49
LRIG1
VIM
KLHL3
UGT1A7
SEPTIN9
PGK1
DSP
SPIN1
SLC20A2
AHCYL2
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
TNC
SMN2
SMN1
SINHCAF
DOK7
CCAR2
C8orf58
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
ADAR
MAST1
PTAR1
NRBP2
UNK
H3-3B
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
ZNF34
CCDC200
ANKRD35
CAPN3
STRA6
PITPNM2
SLC66A2
HSBP1L1
EFNB2
SHF
TBC1D14
EMSY
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
LEMD2
FYN
FOXI3
TMEM47
EPHB3
DACT1
NDUFV1