ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10101685 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◣ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

DUX4
CDX2
URM1
REST
PLAGL1
SMARCA2
SOCS3
FRG2C
SACS
SOX2
SCN5A
CACHD1
TCF7L1
CADPS
SMAD7
TERF1
ARHGEF38
AGO1
NES
RPH3A
MUC1
OBI1
CD99L2
SPRED2
FIGNL2
LRRN1
GBX2
GLRA1
CER1
BCOR
APBA2
GIMAP5
TMPRSS11E
CD82
MUC4
FAM174B
NR5A2
MTF2
NTRK2
FLNA
EMD
TTYH1
ATP1A4
NAV2
SLC36A2
GAST
SP5
METTL11B
DNMBP
ID1
TNC
SOX6
BCL2L1
RFX4
RMND5B
TARS1
DMXL1
GOLGA6D
GAD2
PLPP2
SRRM4
LRRN3
FRG2
SHCBP1L
CCDC169-SOHLH2
CCDC169
BDH1
SHISA5
TREX1
PIPOX
NFE2L3
RPL17-C18orf32
RPL17
PIM2
OR5AR1
MTM1
PPBP
PF4
C9orf85
ABHD17B
ART1
LLGL1
DPPA5
ZNF436
STON1-GTF2A1L
STRA6
FGF1
IFRD1
LRRC10B
RNASE6
EDDM3B
STN1
ANKRD1
VENTX
UTF1
SMIM32
EPHB3
ERMN
PPP1R16A
FOXH1
TAF4B
NUAK2
RPGRIP1
MFSD4B
WDFY1
SCARB1
CLDN9
CLDN6
ZNF775
MRPL20
ITPRIP
BTBD10
DNMT3B
FOXD1
SOX21
POU5F1
TRAPPC8
TLL2
MTRNR2L8
DUSP6
FBXW11
LIN28B
BFSP1
ZBTB8OS
RBBP4
LIMCH1
SNRPN
FRAT2
FBP1
PCNX2
ETV4
CDH18
DUSP12
HHIP
SLC5A9
NRCAM
KDM2B
COL17A1
ZFHX3
WEE1
LIN28A
XPNPEP2
SERINC5
FOXA2
DNTT
PHC1
LMCD1
TRIB2
HOXB1
ICMT
HES3
USP7
FGD3
PRSS48
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CSAD
ZNF740
ALDH1A2
KLHL4
KLF6
FAM126A
NANOG
SLC7A5
SRCIN1
BOD1L1
LFNG
FZD5
SLC6A8
PNCK
LHPP
AKIRIN1
HABP2
FAM222B
USP44
ZEB2
MDN1
ARSD
IER5L
CNPY1
SAMD5
CCBE1
PARN
BFAR
PRICKLE1
PPP1R16B
FBXL14
DHDDS
TMEM63A
LEFTY1
REV3L
GAS1
ECE1
RNF213
SFRP2
TMEM43
CHCHD4
TRPM3
OR6A2
ONECUT2
TIAM1
LOC150051
COL23A1
NAA50
ATP6V1A
GXYLT2
RIPK1
LEFTY2
NLRP12
SULT1C4
ZNF398
NFE2
NFE2L1
GNAI2
CYP2S1
DMTN
FGF17
FLVCR1
SPATA45
TRIM24
PBX2
GPSM3
LIPK
ZDHHC14
GLYATL1B
PMEPA1
TCF20
CBFA2T2
WNT2B
KLHL7
RNF220
PHRF1
SENP2
SORBS2
FADS3
ZNF483
PIN4
MTHFD1L
DHX32
COMMD7
LMNA
MEX3A
NDUFS5
MAD2L2
DRAXIN
PHC2
ACSL1
ST18
ID3
SSB
HESX1
TBC1D14
GLI2
GADD45G
LINGO1
ZNF343
GSX2
UPF1
LIX1
LOC102724770
DGCR6
RNASET2
ATP8A2
CRYAA2
CRYAA
UBQLN4
LAMTOR2
FAM24B
SAMHD1
BUB1
GSAP
KLF3
HSCB
CHEK2
HMOX1
NECTIN1
FGFR2
ROR1
BBC3
FGF13
FZD7
TUBB2A
FZD2
ATF4
SALL3
MIEF1
FEZF2
PLA2R1
OLFML3
ZNF664-RFLNA
ZNF664
CCDC92
NEUROG3
MAGEA11
GSN
GNAI1
KIAA0895
ZNF608
TEKT3
DDX46
FAM180A
SLC46A1
SPATA12
MFHAS1
CDC42EP3
CHI3L1
MYBPH
APELA
ARMC12
SMCO1
ARHGEF4
PKNOX2
NTN1
HROB
KIF26A
NADK
RGS3
LZTS1
NDUFAB1
DDR1
ZNF469
AIFM1
PDK1
SYNPO2
SOX14
NEUROG1
GUCY2F
BTG2
AHCYL2
CA6
DOK7
MED25
FUZ
KNDC1
WDR49
SMPDL3B
TTC39B
UQCRHL
TFE3
GABRB3
PGAP3
ERBB2
FZD8
LEMD2
ARID3B
ESX1
SDCBP
SLTM
GPR31
RHBDD2
TSPAN13
ZNF814
C6orf132
DPH6
MAGEB2
DGLUCY
CITED2
LRAT
RCN1
WNT1
KDR
KPNA2
IL34
ESRP1
PHF3
MRS2
TEAD1
SCAF4
ARHGAP10
POU2F3
TRIT1
OR2AT4
MPP1
ZNF251
P2RY12
ANK2
IGFL3
TMEM132B
PSMA1
EEF1A1
C1orf100
SLC45A3
BAHCC1
EPHA4
KANSL1L
USP17L21
USP17L20
USP17L12
USP17L22
NRARP
FAM227A
CBY1
MAMDC2
NDUFB5
MRPL47
HMGB1
ZSCAN2
NRG1
APOBEC3F
PTMA
HDAC9
TENT5B
MTRNR2L1
GDF11
SGK1
ITGB8
ANKRD10
TDGF1
KIF21A
ZSWIM3
ACOT8
LRRC2
SHC1
FLAD1
CKS1B
GRK6
ETS1
NOTCH1
UGT1A6
TALDO1
TNNI3K
DDX17
ARID2
KRT31
SMPD1
SCGB3A2
ETV1
MED12
IL2RG
TRIM2
CELF3
RASGRF2
RIIAD1
FGD4
DDX43
HOPX
PSMD9
HPD
VCAN
ITPRID1
GOLGA6B
KIF5C
ENSA
WFDC8
NCDN
KIAA0319L
CYP1A1
LDB2
FZR1
GOLGA6A
PHF5A
ACO2
SALL4
ZYG11A
RPS24
DAGLB
ZNF18
TMEM70
CELF4
GPRC5B
C1orf127
FAM120B
CDC14B
LCA5
MYSM1
LY96
FGF2
PRKG1
MTRNR2L2
MSH3
DHFR
KMT2B
IQCH
AAGAB
SYBU
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
PALM2AKAP2
SNURF
CYTH2
PUF60
MKRN1
ZBTB40
GCNT2
MCCC1
PHLPP2
PSMG3
FOXP1
SOX5
TMCC1
PER2
FBXL19
RIF1
SLA2
KIFBP
MMACHC
CCDC163
DLL1
PRDM14
SGMS2
AMN1
SIPA1L2
TRIP4
PCLAF
FOXB1
SGPP2
FBXO40
PYGB
HOXD11
MACROH2A1
CRH
HGS
ARL16
WDR55
DND1
RASA1
ZFC3H1
THAP2
SNAPC3
HOXD13
HOXD12
CREB5
SLC35A5
CRYGB
OR5K3
LRRTM3
WNT5B
ATG3
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
SMAD3
ATG10
ARAP3
GJA1
ITGB3
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
VOPP1
CAPRIN1
TNRC18
LOC100129484
TUBB
MDC1
LARP1B
DCAF4L1
PREX2
SLC30A9
SPIC
ECT2
EOMES
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
UNC13B
SH3GL1
CHAF1A
CD24
EBF2
DUSP29
BEND3
SH3BP4
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
EAPP
MORF4L2
TCF7L2
AASS
CPA2
BICD1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
KCNN2
GDF3
ASXL3
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
PPP1R2
LIMK2
TES
WDFY2
SMYD2
LRRTM4
ARIH1
SIN3A
L1TD1
NRROS
PSORS1C2
CARHSP1
NEBL
FGF12
TIMP4
CNN3
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
PARP16
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
PGPEP1
RTN4
KLF5
ATXN3
GCSAM
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
SERPINA1
ZNF781
IFT80
DDX3X
KIF6
TBC1D16
ZNF304
CHN2
PSME3IP1
DENR
CUEDC1
DST
TMEM167B
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
TPST2
RBFOX2
PAK1
ABO
ANKRD6
KLHL6
RASAL2
NDST1
PYCR2
SYN3
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
SEPTIN9
PGK1
DSP
SPIN1
SLC20A2
CACNA2D1
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
SMN2
SMN1
SINHCAF
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
GTF2I
ADAR
MAST1
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
CCDC200
ANKRD35
CAPN3
PITPNM2
OAZ2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
EMSY
TTC13
KCNMB4
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
FYN
FOXI3
TMEM47
DACT1
NDUFV1
ZNF536
MUC3A
RTBDN
PACSIN2
PDIA4
NEDD9
NUAK1
C1QTNF7
HES1
ZNF296
GEMIN7
CCN2
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
MYCL
SIX2
CTBP2
FXYD7
TPCN2
ZNF875
ADGRL2
ZNF195
ESR2
TAF13
CFLAR
TMUB2
URGCP
FUS
INSM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
PDE1B
AUH
SOAT1
UBAP2
FAM98A
NBPF12
TCF4
TRIM28
OSBPL1A
ERVH48-1
ANXA2
ST3GAL6
EYA1
DIDO1
ATXN7
CST1
FAM219A
DNAI1
FAM107A
CCN3
CXADR
SLC33A1
ETV6
MARCKS
FOXO6
CCL26
CERCAM
GID8
MVB12A
ZBTB18
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
CLPB
SMIM14
TSPAN14
PRKAG2
INTS9
HMBOX1
SLC25A36
TUT1
MTA2
ZNF649
KCNIP4
MSANTD4
ZNF565
NPSR1
SYNDIG1
ZNF674
DPPA4
AGK
SDK1
SLFN12
RAB15
TCP1
MRPL18
LBP
ATP6V1G1
NMNAT2
BCL9
SOX13
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
FAM227B
DISP3
TNS3
PRTG
URGCP-MRPS24
SLC23A2
TET3
STOX2
CDH10
DICER1
SHANK2
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2
PSEN2
TJAP1
MBD4
IFT122
AFAP1
MTHFD1
MMP10
UHRF1BP1L
NUP160
SLC2A8
TLE1
COL4A2-AS2
BST2
KRTAP3-2
DUSP1
RASSF8
NBPF20
SPHK1
ENKUR
WDR36
RNASE9
ARHGAP42
CEBPZ
POLDIP3
ZSCAN9
BIN2
FAM20A
PCYOX1
SLC16A13
SLC16A11
RAPGEF5
FRY
ZP2
ABCC10
PCDHB5
FAM153B
TNRC6A
PKIG
FMN1
OR2T1
OPN5
RIC8B
SORT1
IFNE
SPATA22
WDR74
STX5
G3BP1
ABLIM1
HNRNPA3
RABGAP1L
CRLF2
CFAP20
ADGRD1
S100A16
ZNF428
SRRM5
LRRC47
ZMAT2
MBNL1
RNF43
BORCS6
MEIS2
HSF2
SFRP1
MPP2
LGALS8
CRISPLD1
MBNL3
SELPLG
SSUH2
INO80C
MEF2C
TAF12
PDGFA
LRTM1
DTNA
GALNT18
MAP6