ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101128 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◣ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
DPPA5
TRIP4
PCLAF
FBXW11
GDF11
REST
MED12
IL2RG
TMPRSS11E
JPT1
RIPK1
ARHGEF38
SPIC
ZNF483
PIM2
MTF2
ID1
RIF1
SOX6
ATF4
MIEF1
ZYG11A
TNS3
UGT1A6
UGT1A7
ITGB3
NRG1
ZNF34
ZNF517
RPL8
NCDN
KIAA0319L
SGK1
SLC35A5
ATG3
SSU72
TERF1
FAM222B
MYSM1
CD99L2
MUC4
SLC37A4
APELA
ZBTB8OS
RBBP4
MSTO1
TIAM2
ZFP3
OBI1
CMIP
ZNF343
TBCD
FN3K
RNASET2
PYGB
TUBB4A
TARS1
NRROS
SLC25A29
BICD1
ANKRD1
EIF1B
MRPL20
PDSS2
DDX43
SMC6
GEN1
RPS24
MKRN1
UBAP2
CRYGB
PUF60
NRBP2
TNFSF8
CMTM4
C5orf60
LRRC10B
RPS28
NDUFA7
CD320
KLF5
AIRE
ATG9B
ABCB8
SPTLC2
MSL2
NSUN4
MRS2
TRIM2
CELF4
FAM200B
GLYATL1B
VENTX
UTF1
MAGEA10-MAGEA5
MAGEA10
TACSTD2
RMND5B
PRICKLE1
CCR8
CFLAR
MLN
MAMDC2
SAMHD1
ESR2
PARN
BFAR
ATXN3
PTAR1
GINS3
CLPB
VSIG10
NLRP7
DUX4
MFSD4B
DENR
VANGL2
ZNF398
CD9
PRODH
LOC102724788
NDUFV1
PAX6
SHC1
FLAD1
CKS1B
WDHD1
SOCS4
GSN
ZNF875
TCP1
MRPL18
PNLDC1
PROM1
ZBTB18
SHCBP1L
BLOC1S2
MROH7
PRDM14
DUSP12
ZNF335
PSMG3
CYP4A22
SLC25A16
CCDC130
ST3GAL6
OR6C3
NADK
TULP2
NUCB1
APOBEC3F
TALDO1
SEPHS2
ZSWIM3
ACOT8
NDUFAB1
NES
ABCC10
NFKB2
RBM8A
TENT5B
ANAPC4
NANOGNB
CLEC4C
RPGRIP1
C10orf95
MFSD13A
PMEPA1
NBPF12
DMXL1
AASS
KIFBP
ZNF729
ATAD3B
ZNF565
MTRNR2L1
SOX5
CCN3
C7orf50
SYBU
MFHAS1
TPCN2
UPP1
SALL4
GALNT8
DDX46
BTG2
PALM2AKAP2
CSAD
ZNF740
SNAPC3
TEKT3
FUBP1
DNAJB4
RMND1
ARMT1
ZDHHC9
PSORS1C2
CEBPZ
CPA2
SPTY2D1
C19orf25
NVL
GNAI2
FAM20A
SMPD1
ZNF649
ZCCHC4
RPUSD3
FANCA
RPTOR
KLRB1
LRPAP1
MTHFD1L
PRPF39
TMPO
PTPRN
TBL1XR1
CREB3L1
SGPP2
SLC66A2
HSBP1L1
GLDC
TET3
SLC2A11
RPL24
SLA2
UNC13B
S100A2
APOC1
TESK2
PTBP2
MMACHC
CCDC163
IRAK1BP1
KRBA2
GP5
FOXP1
HAUS5
TSACC
CCT3
PLAAT4
KIF16B
NCOA7
MCHR1
MOG
GOLGA7B
FAN1
TDGF1
LRRC2
PIGZ
SCGB1D1
TRPV3
KDR
SMAD7
MT1E
NCBP2AS2
NCBP2
PDCD7
SLC16A10
FEZ2
WDR55
DND1
GUCA1A
ZNF318
MYOF
STMN1
ZNF552
GTDC1
ZNF696
SNRPN
SLC23A2
REEP6
PCSK4
BIN2
BRDT
PCLO
STAG2
HOMEZ
PPP1R3E
ID3
ZNF469
SRSF12
ABO
PPEF2
MBOAT2
FLVCR2
ATMIN
AGO1
SLTM
PRRC2B
CCDC9
MPZ
SDHC
IGF2BP2
IER5L
PDCL
DLX6
SLC35G4
REM1
DEFB124
SFRP2
FGD4
CBX1
NMUR1
ITGB5
LRRTM4
GCNT1
KDM2B
KLHL3
HNRNPL
TMEM229B
LARP1
TTLL1
ZNF665
PLEKHB2
SNX19
CRLF2
NECTIN4
AGL
ZC3HAV1
ANGEL1
LRRC74A
ITPRIPL2
MGLL
UTS2R
NPSR1
PATE3
TMEM70
LY96
OAT
PGAM1
DDX23
ETS1
RASA1
GJA1
FBXO40
SLC35G5
FUS
HNRNPA3
FAM98A
CLDN4
METTL27
GARS1
SSB
ZCCHC3
C20orf96
GCNT2
SOX4
RASSF8
PRORP
PPP2R3C
ARRDC2
FAM227A
CBY1
IGFL4
MRGPRX3
TMC5
ZMAT3
SIKE1
APOBEC3G
ZFP64
PRAMEF17
LARP1B
SLC6A8
PNCK
OR6J1
ARHGAP19
RTN4
RNF19B
BDH1
PTPN12
PLS3
CRACDL
CXADR
SGMS2
SOAT1
FAM107A
NOTCH1
ZNF106
SNAP23
CNR2
DVL2
ACADVL
DEFB108B
NEPRO
HSCB
CHEK2
RNASE10
OR6C70
LINGO1
GABRQ
NBPF20
SLC25A12
SNX4
DNTT
C2
PEX5
MBNL2
CATIP
PIAS4
DNMBP
RUBCN
METTL2B
PUS1
C9orf85
ABHD17B
ZNF75D
ETDC
LDAH
LIPK
CCL2
HLA-A
HUS1
LDB2
RBM22
PRDX4
SEC23B
ABL2
FOXN3
KHDC1L
CCDC91
P2RY12
ZNF385B
GRAMD1C
HOXD11
HOXD13
HOXD12
SYN3
SLC3A2
BARD1
CTSC
ZNF90
DPPA2
EHD4
FOXJ2
MAPRE3
FASTKD1
PPIG
ENSA
HSF2
OR6A2
CCDC85A
BASP1
YIPF4
NLRC4
RIMKLB
RAB42
PPP1R16B
RAB15
FNTB
RPGRIP1L
FTO
WDFY2
S100A16
GLIPR2
PRKAA1
GRAP2
TYSND1
LDLRAD1
MARCHF8
TRAPPC8
ZP2
SCHIP1
INTS9
HMBOX1
ELMO3
KIF21A
RASGRF2
SUCO
IFRD1
AKIRIN2
PHC1
SLC35F6
C1R
DEFB132
PAAF1
SOX2
OR5AR1
SOCS5
FLVCR1
SPATA45
SNX3
SHISA5
TRIM24
SIN3A
TAF13
DISP3
DERA
SEPTIN5
PNMA1
XBP1
F11R
DDX39A
GJA10
PKN1
OR4X1
FRAT2
ZMAT2
CCDC57
PRPS1
SPRY2
CATSPER3
FCHO1
FGFR3
DAGLB
DUSP29
AK4
FAM193B
TRIM56
MPI
HCAR3
HCAR2
ACYP2
PSME4
HILPDA
ZNF680
TUBB2A
DSP
CR1L
PLTP
LEFTY2
PCYOX1
B4GALNT2
MUC21
KLF7
OAZ3
MRPL9
OR8S1
PMS2
AIMP2
SMAGP
TFAP2C
CARS1
ZMIZ2
MS4A12
CRYZL2P-SEC16B
ZNF460
UGP2
PHETA2
NAGA
THOC2
GIMAP5
SET
KCTD7
PSRC1
ARFGEF1
TXNDC15
HARBI1
ATG13
TRIML2
ERVH48-1
SLAMF1
IGFALS
ZIC4
ZNF43
PEX12
AP2B1
ZIC1
DYNLL2
REEP1
POLD1
GMCL2
NUDT4
LOC100130520
CD300H
MRPL22
GEMIN5
NTAQ1
CSPP1
ALDH1A2
ADA2
STRA6
ASH2L
SMIM31
PRKAG2
RBBP9
A2ML1
SLC38A9
MYO5C
RFC4
ANKDD1B
SH2D4B
SARDH
CNGA1
NIPAL1
SNTG1
PRDX3
AIP
TMEM202
HYOU1
VPS11
OR8B3
TMEM247
GOLGA6D
MVB12A
BST2
ZNF100
CYP1A1
BUB1
FZD8
TM9SF1
RMDN2
TSSK4
ZNF534
TSPAN13
ZC3H12B
CREBZF
SLC7A7
DTD1
MRPL52
HS3ST2
CLEC4A
ASIP
ZNF675
AKAP7
MDK
LIMS1
DOCK1
PNISR
COLEC11
MS4A1
NCBP3
CTNNA3
NNT
NFE2L3
LRFN5
DEFB107B
DEFB107A
SSH1
ZNF532
USP32
KCNF1
SLC17A5
TOMM40
LBP
EVA1B
BCOR
ITPKB
GNPTAB
SUMO3
STMN2
ULK4
URM1
TREX1
CAPN3
IFITM1
IFITM2
IFITM3
RPS3
ATG5
SULT1B1
PTPN2
MBD4
IFT122
ALPL
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
ORAI1
GPR85
NPAS1
CLDN9
CLDN6
MACROH2A1
SPIN1
ARID3B
USP1
SEC22B
ZNF37A
SMYD3
CYP4A11
SALL3
LGR6
RNF135
ADCK1
SPDYE13
TUBB
MDC1
L1TD1
RPS6KA2
WDR25
WARS1
SEC63
UBL3
FAM227B
SLC66A3
SERF2
SCUBE2
ELL3
GAST
DCAF4L1
SLC30A9
NBPF15
PINK1
VTA1
NMBR
CLEC9A
VPS37C
GAPDH
OCM
RTP3
E4F1
METTL16
NCKAP1L
PGP
BRICD5
OR2H2
SLCO4C1
SESTD1
NUP205
PI16
HYAL1
CKAP5
CDX2
CADPS
COL17A1
UAP1L1
SAPCD2
VIT
HLA-F
FAM169A
NLRP12
PIN4
VMO1
PSMB6
GLTPD2
PHKB
ITFG1
MAP3K19
PLLP
FAM174B
CRH
TTC13
CAAP1
MARS2
CYTH2
UFD1
CDC45
SULT4A1
TULP4
ZNF600
ABCA13
LHFPL5
CLPS
ZNF138
MRPS36
FERMT1
PGM2
HACD2
EPB41L4B
KNG1
CCM2
TAX1BP1
RPRD1A
KCNQ5
CCDC169-SOHLH2
CCDC169
SYT2
MORF4L2
LIN28A
EXT1
KRT8
SRCAP
LOC730183
ELP6
RANGAP1
ZER1
TBC1D13
ZC3H7B
LRTM2
SYTL4
LGALS4
SPATA22
ASPA
NOXRED1
CENPS-CORT
CENPS
ETV4
PRR13
ATG7
TMX2
MED19
EML2
C5orf34
EMC8
COX4I1
RWDD2B
ZSCAN2
IQGAP2
DLL3
SPAG5
GGTLC2
RAPH1
TCF7L1
CCAR2
C8orf58
ARHGAP42
SLC25A18
ACADS
GDF3
PHB2
ATP6V0A1
RNF212B
C10orf99
SUCLA2
SLC35G3
SKA3
MRPL57
TBC1D22A
PRAMEF33
SHPK
CTNS
CSNK1D
SRP14
ZC3H11A
ZBED6
CGN
VAMP1
LRRN3
HOXB1
PARP1
ST6GALNAC1
TRIM52
LZTS1
BCL2L1
ZNF296
GEMIN7
PRTG
YAF2
GALNT3
STX18
RPP14
HTD2
ORC2
FBXL19
PEA15
FGF4
INKA2
DDX20
TTC23L
IGSF23
BEND3
CHRNA1
KRT82
ZNF878
ZNF341
SPDYE5
POM121C
SCGB3A2
UQCRHL
SRSF7
IFNE
SPATA13
RAB40AL
MORC1
SERPINB9
AARS2
BCKDK
AP1S1
GAD2
SLFN12
IL1A
CTHRC1
ASNSD1
ASDURF
GLT1D1
SOX21
TMEM239
MSLN
NDUFAF3
IMPDH2
DALRD3
KNDC1
CNOT11
CHMP7
GALNT11
AMBRA1
HLA-DQB1
GIMAP7
NAV2
INO80D
CENPA
COL26A1
YWHAE
VN1R4
DUSP6
FEZF2
CLPP
RBM5
PRKAR1A
CERCAM
EIF4EBP2
GAS6
LPCAT4
MX2
OR6S1
OR8J3
FOXO6
MPP2
RING1
PHTF2
NCR1
TRAF3
CCDC200
EFNB2
PSME3IP1
RSPRY1
FZD5
PLPP3
F2RL1
ESCO1
SRRM4
LYPD6B
CHI3L2
TLCD4
ZNF432
EIF3C
PYDC5
IFI16
F7
SRSF10
MTRNR2L2
MSH3
DHFR
IL34
DHRS3
AMOTL2
HOXB2
XRCC6
DESI1
TRIM44
PRAMEF10
TMC7
ZNF260
ARL8B
TTC9C
HNRNPUL2
GAS1
FAM219A
DNAI1
TRIM5
TRIM22
SMARCB1
GPRC5B
CAPRIN1
BOD1L1
EMSY
WDR33
SNX16
IQCF2
GABRB3
SENP2
CLN6
KRTAP5-11
TMEM160
CD101
NAA50
ATP6V1A
INSM1
GNA12
NEB
GEMIN6
ZNF487
MESP2
OMP
TNFAIP8L1
CEP41
PPP1R2
XRCC5
MAML3
MCM10
MICAL2
SMCO1
NANOG
DDX3X
KANSL1L
ATP9B
DES
FCGBP
ZNF329
SLC2A14
SLC20A2
CCDC149
SELENOT
EIF4G3
CLDN20
MX1
SBNO1
F11
CEP85L
BRWD3
MRLN
HDAC9
SEMA6D
PAK1
TMEM132A
MRFAP1L1