ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407084 | Esophageal squamous carcinoma cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◣ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMCO1
MTF2
IGF2BP2
FAM227A
CBY1
NDUFB5
MRPL47
NAV2
LTBP2
KRT31
PADI2
RPGRIP1
THOC3
MYEOV
SYNE2
LIMK2
DDX17
MCCC1
ITGB8
CDKAL1
PLPP2
VWCE
CDC42EP3
MED25
FUZ
OSER1
PYCR2
RFC4
PHF5A
ACO2
IQCH
AAGAB
NEBL
SVIL
ANKRD35
OR7C1
OR7A5
OR7A10
MAST4
BCAS1
COL17A1
ERG
SLC9A8
SERPINA1
CAPNS2
PTMA
KMT2B
KIAA0040
KLHL6
JUP
SH3BP4
RABGAP1L
ZSCAN2
HES1
SYT2
RBFOX2
ST6GALNAC2
GALNT10
ZNF37A
TMEM63C
ANKRD10
CDH13
HMGB1
ZNF335
PXMP4
RNF31
PSME2
EMC9
PSME1
NTN5
NIBAN2
CYP24A1
TTC39C
ZNF608
LFNG
KRTAP3-2
KRTAP3-1
SMCP
PLA2G6
HERPUD2
KIF6
ZNF436
ACP6
PTPRB
NRP1
ZC2HC1C
ACYP1
MLH3
F11R
ETV4
CEP20
CNP
PSG1
FXYD3
MTMR1
PHYHD1
ZNF609
MANBAL
RFLNA
STK31
UACA
RIN3
CYB5A
TJAP1
LRRFIP2
NTF3
ANKRD33B
DYRK1B
FBL
VIT
CLUAP1
C16orf90
UGT3A2
OPHN1
FGF2
FGF12
LMCD1
PHLDB2
LGALS14
TAF12
SRGAP1
ARID2
LRRC72
SOAT1
TRIM2
CUEDC1
CCDC57
EVA1A
CNKSR3
GSC2
ANKRD1
DST
TAGLN2
SLC25A5
SOCS3
NOL6
TRIOBP
NOL12
ETAA1
KLHL38
NRARP
POLR2M
LYRM1
DCUN1D3
PMEPA1
PER2
ABCC1
ALPK2
SERPIND1
VWA5B2
GRK6
ZDHHC3
EXOSC7
SLC20A2
ECT2
HNF4A
ST6GALNAC1
SLC10A1
HMOX1
SLC2A5
KRT86
IFRD1
TUT1
MTA2
CYP1A1
TEAD4
PLA2G4B
JMJD7-PLA2G4B
JMJD7
ROS1
OLFML1
YLPM1
PHACTR2
TMEM205
CCDC159
RAB3D
TM9SF1
IPO4
TMCC1
KLHL24
TGFBR2
ATP8B1
OTUD7B
MKNK1
MOB3C
FOXJ3
SIPA1L2
UNK
H3-3B
CCT2
LTF
ATXN7
THOC7
BAHCC1
ELAPOR1
C1orf194
MMP10
PPP1R13B
ITGB4
TJP2
MT1F
MT1B
PARP16
POLDIP3
CTSV
MIDEAS
KIF13A
CHRNA9
ACP3
TRPV4
NOTCH1
ENKUR
MYH9
SMCO2
ARNTL
C11orf86
SYNGR2
CPNE2
RMDN2
OTULIN
NDST1
C1QTNF7
ZNF503
GPRC5A
GRAMD1C
CALHM4
PRDM2
EAPP
CHST12
SOX2
ARHGAP10
MAP3K2
PLEKHG1
SPRED2
HGS
ARL16
CEP63
ANAPC13
MTBP
MRPL13
SLC35D2
FAM89A
DNAH5
CEP41
ONECUT3
WDR74
STX5
GABPB2
NKD2
FBXO27
MFGE8
BCL11A
PTPRS
HDAC9
FBXL19
OSBPL9
ID1
SINHCAF
MTHFD1
CHD8
ZNF148
FAM168A
ICE1
TPCN2
ATXN1
SLC16A13
SLC16A11
SYCP2
FAM217B
SPRY4
SELENOI
ADGRF3
LNPEP
TMUB2
TMEM255A
CDCA4
NINJ2
PXDC1
KRT6A
EP300
KCNMB2
GGT1
SOX21
SPTLC2
TSNAXIP1
RANBP10
SDC1
NDE1
MARF1
KIAA1671
OGA
SFPQ
NPIPA1
SH3D19
SRBD1
SORT1
TRMT2A
RANBP1
ME2
PIN4
SAR1B
JPT1
SRSF7
CCL26
KLHL13
PTHLH
TMEM260
SLC33A1
UPK1B
UBQLN4
LAMTOR2
CMYA5
OR1K1
SIX2
SPHK1
SAV1
POMT2
GSTZ1
ITGB6
FHL2
MTHFD1L
OAZ2
FGD3
LCA5
C18orf25
ZNF117
CA12
ERVH48-1
TBPL2
TNRC18
LOC100129484
ETV6
CNTN1
RAI14
PIGX
CEP19
WDFY2
STN1
AKAP6
MUS81
CFL1
TFB1M
NAALADL2
SIRT4
MALT1
TRERF1
ZBTB40
EPHB3
PRMT5
RETNLB
UGT1A6
OIT3
IFT27
LRP11
NPIPA8
NPIPA7
HAO2
MRPL33
CD2BP2
ZNF106
SNAP23
DDX59
AHSG
DENND2B
DSG3
TUBB
MDC1
PDIA4
LYPD5
SECTM1
FURIN
MSMP
DENND1B
ABLIM1
CELA3B
RNF152
PCTP
ABCC10
ANO3
CTNNA1
LRRTM2
AKIRIN2
GREB1
INPP5D
ELFN2
GET3
DNAJC16
CASP9
PELATON
CSRNP2
GRAMD2B
SLCO1B3
SGTB
NLN
E2F1
NDUFS8
PADI4
CEMIP
SENP7
ZFHX3
TGIF1
EML2
SULF1
TMEM258
FEN1
DGLUCY
VARS2
GTF2H4
TNFAIP2
ATP6V0D2
PTPRF
FAM72C
TMEM212
WDPCP
LTA4H
MAPRE2
EPM2A
FAM83A
CERS3
WEE1
G3BP1
KRT13
MRPS18B
ATAT1
CYTH1
CLIP4
C10orf67
GDA
UFD1
CDC45
CFAP20
CPSF4L
S100A16
S100A14
CYP2S1
MLEC
ZNF34
MTUS1
LGALS9C
SMAD5
KIF22
SLC25A47
ZG16
PRRC2B
GNAL
CHMP1B
TOMM40L
APOA2
CBLC
ETV1
ARIH1
KLF5
PEDS1-UBE2V1
PEDS1
SPO11
KRT19
KRT15
MOV10L1
ARHGDIB
TMEM221
LRRC25
RDH14
NOTCH2NLB
UBB
ZFAND3
ZNF57
VDAC2
NDUFS2
ADAMTS4
PYGB
ETV5
DLG1
FAM219B
PIF1
TIAL1
PRKDC
MCM4
LGALS9B
FOXN3
PLS1
RIPOR1
GUK1
RSU1
TPM1
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
ACAP2
RLF
PPP6R1
OCIAD2
PLA2G2F
LIN28A
ADAR
PLEKHG3
RCOR1
CDR2L
MORF4L1
LCLAT1
APOBEC3B
RASAL2
SSUH2
PIP4P1
OSGEP
APEX1
SMIM35
TMPRSS4
HID1
PIK3R3
CYB5R2
SENP8
MYO9A
CLDND1
NRL
DCAF11
SHISA7
SRGAP2
FAM72A
ID3
LRIG1
CPT1A
SCOC
ARHGEF19
TTC6
FOXA1
C18orf21
KDM2A
WDR36
RHOBTB2
CHST6
PTPN2
PRKACB
TNFAIP8
EPHA2
SUV39H2
ZFR
UBE2L3
RIMBP3C
RIMBP3B
CA6
GBA
CTNNAL1
NOS3
RIOX1
ABCC5
ZNF304
ITGB1
RPL27
IFI35
DNAJC21
BRIX1
RBBP8NL
CASTOR1
FMNL2
PNKD
SLC4A7
MED9
IKZF3
APBB2
DPP3
UQCRQ
GDF9
LEAP2
MCTS1
VPS37C
TRMT12
ALK
NRDE2
CLIP1
SLC12A7
SH3PXD2A
MLLT11
CDC42SE1
RPL6
PTPN11
PEMT
KLRK1
ICA1L
HTR3D
IGFL3
HEXIM2
ARSG
SLC16A6
LOC105370980
PTK2
FAM220A
ZBTB7C
TCF3
TOMM40
ZDHHC5
OTOGL
NAAA
RNF113A
NDUFA1
BCL2L1
ECE1
CNN3
CCAR2
C8orf58
MEIS3
CYREN
ID4
IL1F10
ZNF76
CAPRIN1
ZBTB20
ZNF77
ANKHD1-EIF4EBP3
ANKHD1
EFHC1
CELF3
RIIAD1
DLX5
EXOC6
LBH
NOX4
CLDN12
EXOC5
AP5M1
MERTK
PARP2
CCNB1IP1
GADD45G
MOG
CCDC9
OR10V1
ECH1
ROPN1B
CCL24
SDCCAG8
CEP170
GOLGB1
CAPN13
LAMC1
ERLIN2
NAA40
RBM25
AQP8
SYTL5
H2AP
GUCA2B
FOXO6
ITPKB
TMTC4
SSBP1
NEK10
MUC13
CRKL
KLK13
SGPP2
H3C15
H3C14
H4C15
H4C14
CORO1C
KLHDC8A
CSK
GPR137
IRX2
C5orf38
CP
ZFP36L1
PYM1
DGKA
ADGRG7
CXCL5
C9
TMEM107
SLC25A11
RNF167
PFN1
GP1BA
CALM1
DKK3
TM4SF1
ZNF80
GSTP1
FBXO48
APLF
EMP2
MMP13
LPCAT2
KBTBD6
LDAH
ZNF286A
FAM91A1
TBX4
SNRPE
RNF11
CHD6
TUBA1C
ADNP
FCHO1
ZNF710
CLDN10
MMP20
B4GALT1
ATP1A2
ITGBL1
HMGB4
KIAA0930
RIPK1
ERV3-1-ZNF117
ERV3-1
TMC1
KRT9
KRT14
GPR158
PTPN1
XCR1
GSN
TBC1D23
ITPK1
UPF1
SFR1
CLDN1
ACOT2
MYPN
PAWR
OGT
SPAST
CYS1
DNAJB1
LGR6
TECR
C22orf15
METTL9
ZNF70
VPREB3
ZSCAN9
AHNAK
CLDN4
RAC3
ALCAM
CEP120
CENPX
LRRC45
SNRPN
SNURF
CRYGB
TRIB2
SHANK2
BUB1B
GJC1
ASXL1
LIMA1
NTSR1
HACD3
PPIH
SLC7A5
PHB2
TMEM139
CASP2
MNT
S100A6
STK24
MAST2
AGPS
IL1R2
GUCA1C
TRIM29
PARD6B
TTC13
SMARCC1
NFAT5
SGMS2
KCNN2
SLC2A8
SPAG9
SCD5
CCDC116
CLOCK
COL21A1
RNF13
PCID2
CUL4A
SLCO1B3-SLCO1B7
TRIP4
PCLAF
CNOT11
TBC1D17
PNKP
AKT1S1
NFIB
FAM3C
ZNF268
HMGCS1
GAST
PLSCR2
SMIM3
RBMX
COX8C
ANO1
MYOF
CAST
DDAH1
BCL11B
ARID1A
STRN3
AP4S1
MLPH
EMSY
SLC25A36
HEXB
KIAA0319
SDR39U1
RAB40B
MEIOB
WBP1L
PPP1R9B
TASP1
CBX1
HLTF
MAP3K9
RBM47
TRAPPC6B
PNN
HERC5
NGDN
KRT16
FETUB
DACT3
SPAG4
RFX1
VPS50
HEPACAM2
GDNF
DDR1
DSP
LEMD2
PACSIN2
BIN2
PPP1R12B
RGS2
SLC45A4
YPEL5
CCR4
PF4V1
CXCL6
SLC25A25
HNRNPL
NAIF1
CRYGD
XAB2
STXBP2
PCP2
ACVR1B
CRYGC
LOC388282
FOXP1
CELSR3
SLC26A9
CLEC9A
PLXNB2
TGM4
MFSD2B
CACHD1
CCDC130
TMEM88B
PGM2L1
ANKRD65
CCT7
MPP3
CD300LG
MFN2
EPB41L1
CRISPLD1
CCDC80
HEXIM1
COPS7A
VRK2
SPINDOC
FAM193B
GDF5
CEP250
INPP4B
KCNJ15
CCDC174
HOMER2
CALCOCO1
PRRG4
PZP
R3HDML
RARB
DHX8
ANXA3
BTG1
SPATA12
HEBP2
UXS1
ZNF250
ARHGAP36
AP1B1
CYP19A1
PPP1R42
ST3GAL5
SRGAP2C
FAM72B
BFSP1
SH3GL3
MEF2C
AGPAT3
PIM1
SDHD
SLC7A11
UHRF1
PCBP2
TAF1L
MRPL1
SMAD3
LMNA
KIF11
METRN
ANTKMT
FBXL16
ETFRF1
CFAP94
SRRD
HPS4
ARFGAP3
DNMBP
SHC1
FLAD1
CKS1B
ZCCHC14
MTA3
KCTD4
FBXO32
ATAD3A
DHCR24
MRPL16
ATP2B4
KCNG3
KRTAP17-1
KRTAP16-1
RNF216
GJB1
PRTFDC1
HNRNPC
RDX
TRAM1
CD55
RGS22
GSDMC
TESK2
MMACHC
CCDC163
ZFC3H1
THAP2
HIP1
OARD1
NFYA
AOPEP
DOCK5
UFSP1
ACHE
PSORS1C2
MATR3
MEF2A
TAGAP
CSTF1
AURKA
ZBTB33
CDSN
DUSP1
ING4
APOLD1
ANKUB1
FER
NOTCH2NLC
EXOC6B
GTF2H1
HPS5
GZMH
NSA2
GFM2
APC2
FNIP2
RPS15
SERINC5
PRR15
SRP14
HOXA9
HOXA10
HOXA7
SRPRA
GALK2
ANXA11
CEP85
COPS2
RPS6KA1
NUDT13
SH3BGRL3
CCDC68
SERPINB1
LY6L
NOX5
ESRP1