ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2731713 | Lung cancer cell line
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◣ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

HBB
HBD
CLU
MAMDC2
HBQ1
HBM
HBA2
HBA1
MGP
DCN
SNORC
RPLP2
PNPLA2
PIDD1
C16orf46
RPS6
COMP
PTPRN2
TMEM106C
RPS11
SLBP
MTRNR2L1
TPT1
LUM
RPS19
CD79A
RPL32
PROK1
DUX4
RAPGEF4
RPL11
RPL27
IFI35
GAPDH
GOLGA3
CNOT6
ZNF34
ZNF517
RPL8
TRIM16L
FOXO3B
MIB1
CLDN3
PRRG3
TTYH2
RPL38
RPL13A
RPL36
RPS27A
CLHC1
OPTC
S100A6
S100A5
MCC
RPL19
CACNB1
RPS23
ATP6AP1L
FGFBP2
RPL30
UBA52
FMOD
RPL37A
KRBA2
RPL26
RPS15A
S100A8
RPL13
RPS8
VPS52
RPS18
B3GALT4
RPS12
WDR38
RPL35
ARPC5L
GTF3C5
AGBL2
NDUFA4L2
SHMT2
RPLP1
RPS14
ZWILCH
SNAPC5
RPL4
RNF24
TRAPPC4
RPS25
DEFA1B
DEFA1
ATG5
TAX1BP1
ZNF692
RPS16
PCNP
FTL
TMEM238
RPL28
TMEM190
S100A4
S100A3
RPL27A
EEF1A1
S100A9
PGLYRP4
PIK3CB
SERPINA1
RPL35A
IQCG
LMLN
RPL10
DNASE1L1
MBNL3
CORO2B
COL2A1
VIM
FN1
RPL37
CARD6
VWA1
ATAD3C
HLA-B
SCRG1
GPX3
SLC22A16
BTBD1
RPL34
RPS3
MIF
DEFA3
NOVA1
RNF225
RPS5
SLC5A1
RPS20
RPL10A
RPL5
TIMP1
BMPR1B
SERF2
SERINC4
HYPK
SUPT5H
LOC102724770
DGCR6
PEMT
RBFOX2
POLD2
AEBP1
S100A16
SPHK2
RPL18
FAM83E
S100A14
S100A13
S100A1
MEIS2
SCGN
ZNF302
CHTOP
SURF2
SURF1
RPL7A
MED22
RPS4X
CHAD
RPS24
ZNHIT2
FAU
TM7SF2
TAPT1
RACK1
RPLP0
GCN1
POLR3A
PRELP
CDH23
MT1X
RPL6
SPACA4
ZC3H10
RPL41
RPL3
SPATA33
RPL12
LRSAM1
PPP1R12B
TMSB4Y
CPLANE2
BEST1
FTH1
CYTL1
HAPLN3
B2M
TSPAN9
RPL14
HLA-A
STAT6
ACTB
RPL29
RPS21
RNF169
GRAMD2A
ECRG4
TPM3
NAPRT
MROH6
DLX4
PSMC2
DNAJC2
MT2A
RPL31
DVL3
C12orf73
CST3
TMSB4X
TLCD1
RPL23A
RAB34
PROCA1
GSTP1
NEK8
SERPINA3
MFGE8
RPSA
DPH3P1
TMSB10
NPIPB5
NPIPB3
NPIPB4
ALDH3B2
FRG2
IFITM1
IFITM3
TOMM7
RPS3A
RPL23
RPS10-NUDT3
RPS10
TMPRSS11A
HLA-C
TOR1A
USP20
C9orf78
BEST4
MTRNR2L2
MSH3
DHFR
C17orf98
PPP1R27
MCRIP1
EEF2
DAPK3
RPS7
OOEP
OAZ1
FXYD2
RDH5
CD63
BLOC1S1
CCN2
MAMDC4
EDF1
PPIB
SNX22
TSSC4
SOD3
ALDOA
PPP4C
RAB4B
MIA
RPL39
ISLR
CILP
EEF1G
RPL7
RDH10
CAPS
PFDN5
MYG1
APC2
RPS15
ELL
NDUFB10
RPL3L
TBL3
RPS2
RNF151
FBXO44
FBXO2
APOC1
TPI1
SPSB2
APOE
NNMT
LDHC
SLPI
NRARP
MTF2
SMARCA2
REST
CDX2
SOX2
FAM227A
CBY1
NES
TMPRSS11E
NAV2
NR5A2
SACS
DPPA5
SMAD7
PLAGL1
SOX21
TERF1
SOX6
PIPOX
CADPS
ARHGEF38
FRG2C
METTL11B
DNMBP
MTRNR2L8
ZNF483
LFNG
ANKRD1
GAST
LRRC10B
NDUFB5
MRPL47
MUC4
MUC1
ID3
HMGB1
ZSCAN2
CACHD1
DUSP6
AGO1
RPGRIP1
ATP1A4
ZBTB8OS
RBBP4
URM1
NRG1
SPRED2
NTRK2
TCF7L1
APOBEC3F
PTMA
RMND5B
HDAC9
RIPK1
LRRN1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
COL17A1
VENTX
UTF1
SFRP2
SOCS3
LRRN3
TENT5B
BCOR
SERINC5
FAM222B
TARS1
ZNF608
IFRD1
GIMAP5
FGF1
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
ID1
PHC1
SRRM4
CD82
SSB
ITGB8
PRICKLE1
ANKRD10
LMCD1
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
TDGF1
MTHFD1L
KIF21A
MED25
FUZ
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
LRRC2
SMCO1
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
DNMT3B
GRK6
ZFHX3
SLTM
ETS1
NOTCH1
DMXL1
GSN
KLHL7
FBXW11
ABHD17B
SHISA5
PLPP2
NANOG
TREX1
UGT1A6
TALDO1
TNNI3K
DDX17
ARID2
GLYATL1B
ZNF436
KRT31
SMPD1
RNASET2
LZTS1
SCGB3A2
ETV1
MED12
IL2RG
TRIM2
HOXB1
HESX1
PMEPA1
KDR
CBFA2T2
CELF3
GBX2
RASGRF2
SLC7A5
HSCB
CHEK2
RIIAD1
ZNF775
GLRA1
PPP1R16A
ZNF398
MRPL20
FGFR2
NADK
BCL2L1
FGD3
FGD4
NFE2L3
FOXH1
GAS1
ART1
DDX43
HOPX
PSMD9
HPD
VCAN
ITPRID1
TRAPPC8
ETV4
GOLGA6B
KIF5C
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
TUBB2A
NRCAM
ZNF343
NCDN
KIAA0319L
CYP1A1
PPP1R16B
LDB2
COL23A1
FZR1
GNAI2
GOLGA6A
SCN5A
LEFTY2
PHF5A
ACO2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
LHPP
CER1
GADD45G
USP44
ATP8A2
DAGLB
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
GPRC5B
C1orf127
TRIM24
GSX2
ICMT
HES3
FAM120B
CSAD
CDC14B
LCA5
LIN28B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
KMT2B
FBP1
LIMCH1
IL34
PBX2
GPSM3
IQCH
AAGAB
SYBU
DDX46
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
APBA2
CYTH2
PUF60
MKRN1
ZBTB40
CYP2S1
GCNT2
TMEM63A
ESRP1
MCCC1
PHLPP2
PSMG3
FOXP1
SOX5
TMCC1
ATF4
PER2
FBXL19
LINGO1
FRAT2
RIF1
SLA2
CDC42EP3
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
MRS2
BFSP1
STN1
NFE2L1
SGMS2
SAMD5
AMN1
SIPA1L2
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
ZEB2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
FZD2
CRH
HGS
ARL16
MIEF1
WDR55
DND1
RASA1
ECE1
ZFC3H1
THAP2
MDN1
NLRP12
SNAPC3
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
RFX4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
DDR1
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
VOPP1
CAPRIN1
TNRC18
LOC100129484
MAD2L2
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
CD24
ALDH1A2
EBF2
DGLUCY
DUSP29
BEND3
DPH6
UQCRHL
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
EAPP
MORF4L2
PIN4
CA6
KNDC1
C1orf100
TCF7L2
FAM180A
AASS
CPA2
HMOX1
BICD1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
ONECUT2
KCNN2
SCARB1
WEE1
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
KIAA0895
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LRRTM4
LIN28A
ARIH1
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
TTYH1
CARHSP1
NEBL
SRCIN1
FGF12
TIMP4
CNN3
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FEZF2
FOXD1
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
OLFML3
PARP16
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
SLC36A2
PGPEP1
RTN4
KLF5
ATXN3
GCSAM
PHRF1
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
ZNF781
IFT80
DDX3X
KIF6
TBC1D16
ZNF304
CHN2
BOD1L1
PSME3IP1
DENR
CUEDC1
PCNX2
DST
TMEM167B
RGS3
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
IL17RD
SENP2
CRYAA
CRYAA2
UBQLN4
LAMTOR2
TPST2
USP7
SLC46A1
PAK1
ABO
ANKRD6
KLHL6
RASAL2
NDST1
PYCR2
SYN3
WDR49
LRIG1
PRRC2B
KLHL3
UGT1A7
SEPTIN9
PGK1
DSP
SPIN1
SLC20A2
CACNA2D1
AHCYL2
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
TNC
SMN2
SMN1
SINHCAF
DOK7
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
ADAR
MAST1
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
CCDC200
ANKRD35
CAPN3
STRA6
PITPNM2
OAZ2
CITED2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
KCNMB4
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
LEMD2
FYN
FOXI3
TMEM47
NEUROG1
EPHB3
DACT1
NDUFV1
NUAK2
ZNF536
MUC3A
RTBDN
PACSIN2
PDIA4
NEDD9
ROR1
NUAK1
C1QTNF7
PHC2
HES1
APELA
FAM24B
ZNF296
GEMIN7
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
NECTIN1
MYCL
ARID3B
SIX2
FZD5
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ADGRL2
ZNF195
REV3L
ESR2
TAF13
CFLAR
TMUB2
URGCP
FUS
TIAM1
INSM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
PDE1B
AUH
SOAT1
UBAP2
FAM98A
BTBD10