ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10407085 | KYSE-70
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◣ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NDUFB5
MRPL47
SMCO1
DNMBP
PHF5A
ACO2
PPT1
FAM227A
CBY1
SOX21
NRARP
HMGB1
PXMP4
MED25
FUZ
ITGB8
SSUH2
MATR3
CYP1A1
ZSCAN2
GRK6
MAST4
FLG
CCT2
MCCC1
DHCR24
SLC25A36
DDX17
UGT1A6
COA6
MTF2
EPHX1
PYCR2
RFLNA
TXNRD3
DLGAP1
NOTCH1
C3orf20
LMCD1
SPRY4
COL17A1
PTMA
RNF183
NTF3
CNN3
OR13C5
OR13C2
SIX2
CDC42EP3
ZNF148
PADI2
FBXL19
CDC25B
SPEF1
CENPB
NDUFS5
PDIA4
LYPLAL1
CYTH2
GSTO2
ZNF80
TYMSOS
TYMS
PARP16
TMEM88B
ANKRD65
MSMP
SLC16A13
SLC16A11
SOX2
STK31
EXOC6
PSPH
CCT6A
PIK3R3
LFNG
SINHCAF
DKK3
PIN4
ADH7
FOXO6
ABCC1
PGAP4
ABLIM1
OR10V1
SAXO1
ISL2
RRAGA
HGS
ARL16
ECT2
TESK2
MMACHC
CCDC163
UFD1
CDC45
ENKUR
GOLGB1
TMUB2
PTPRB
VWA5B2
MTUS1
ARID2
ZNF775
HMOX1
ALDH3A1
KLHL24
PER2
MFN1
KRT86
IQCH
AAGAB
NEBL
ZDHHC3
EXOSC7
MUC1
PIK3CA
KRT16
TDGF1
LRRC2
RPGRIP1
POMGNT1
VWCE
SLC2A8
NR1I3
PPP1R15A
SMCP
PLEKHA4
ARIH1
MMP10
PIF1
ZNF608
ZFC3H1
THAP2
KIF6
ANKRD10
H3C15
H3C14
ZBTB6
H4C15
H4C14
RC3H2
EFHC1
KNTC1
METTL9
ZNF77
CUEDC1
ST6GAL1
SH3GL3
CORO1C
IFRD1
TLX3
RRBP1
SNAPC3
KCNJ15
ANKHD1-EIF4EBP3
ANKHD1
ALPK2
VASH2
ESRRG
WBP11
C12orf60
RABGAP1
F11R
PKM
CSK
CNKSR3
ZNF304
TGIF1
KIRREL3
PIK3C2A
TOMM40
EML2
SPAG4
ZNF436
YLPM1
NDRG4
KMT2B
RARB
PIPOX
ABL2
PPME1
C2CD3
PALMD
GSC2
HSPH1
NKIRAS1
PLA2G6
NR1D2
PHYHIP
POLR3D
SLC25A25
MRFAP1L1
BLOC1S4
IL22RA1
BCL2L11
DLG1
SERINC5
CDR2L
NRCAM
SRSF7
OGA
DACT2
SDHD
FAM220A
LTF
PSMB7
CDKAL1
RNF20
NAA10
ARHGAP4
ABO
PWWP2A
ADPGK
COMT
G3BP1
CPT1A
BCL2L1
LMNA
TMEM17
SLC9A8
MANBAL
SLC34A1
PFN3
GADD45A
PRR15
ETFB
VMO1
PSMB6
GLTPD2
UPK3B
MYOF
SENP2
SLC26A9
SFPQ
H2AZ2
ACSL6
ELOVL5
CCL26
CDRT15
IFT27
RASAL2
DPP3
DDX5
CHST7
POLG2
KIF5C
ZCCHC12
ANXA11
CELSR3
CALCRL
ABCC5
TUBB
MDC1
OAZ2
MCM7
AP4M1
BCL2L13
OGT
RSF1
AAMDC
ZNF273
AKR1C2
FAM131A
PSME3IP1
RSPRY1
TAX1BP3
EMC6
LRRFIP2
SLC25A11
RNF167
PFN1
GP1BA
PRDX1
FER
CEP63
ANAPC13
STK32C
LRRC27
ABCG1
YES1
TBC1D23
WDR74
STX5
MEIS3
PAX6
ZDHHC5
KRT6A
HACL1
BTD
EXOSC2
CHD6
LAMTOR1
ANAPC15
LYRM1
DCUN1D3
OSCP1
GET3
PCYOX1
TIA1
KMT5A
ANKRD1
ENPP3
ZNF680
TSSK1B
WDFY2
SHF
MSANTD4
RAPGEF5
CLUAP1
C16orf90
ATP2C1
PLA1A
HDAC9
CSRNP2
ERGIC2
TXNRD1
TOMM40L
APOA2
LGALS8
KCTD4
LIMK2
NDST1
LPIN1
NINJ2
ASMTL
RTN4
KLHL6
SHC3
CDK12
ERV3-1-ZNF117
ERV3-1
MED1
SPAAR
HRCT1
ZSCAN9
PLA2G4B
JMJD7-PLA2G4B
JMJD7
NME7
BLZF1
ANKRD35
RNF31
PSME2
EMC9
PSME1
AGPAT3
PCNP
ST6GALNAC2
LIMCH1
EP300
GDF5
CEP250
UNK
H3-3B
PIMREG
AIPL1
GAL3ST4
STAG3
GPC2
TBC1D31
ONECUT3
CAPNS2
BBS7
SPRING1
RNFT2
TNRC18
LOC100129484
SLC33A1
OARD1
NFYA
CALR3
C19orf44
SAXO2
EFL1
RAB30
FXR1
SNCA
GTSE1
CAPRIN1
SH3BP4
TCF4
PTCD2
MRPS27
TPM1
PEDS1-UBE2V1
PEDS1
TMTC3
CEP290
TRIM2
UBQLN4
LAMTOR2
EMSY
WASF1
CDC40
NARF
CYBC1
RBMX
NONO
HTATIP2
HES5
PANK4
DENND4A
UQCRHL
ZNF627
NOL3
PSG1
NDUFB4
TRADD
HSF4
FBXL8
B3GNT9
DST
EIF3L
ANKRD54
CGB5
CGB2
CGB1
TUT1
MTA2
ETV5
CEP70
SPOCK2
SIN3A
LEMD2
FAM102A
SENP8
MYO9A
MICAL2
DHRS12
ZFX
ARHGAP27
TES
MIDEAS
SCD5
PRXL2A
DNAJC21
BRIX1
SLC35E2A
NUP160
MRPS18B
ATAT1
PBLD
HNRNPH3
UMAD1
AMELX
ITGB5
C1QTNF7
UAP1L1
SAPCD2
TBC1D17
PNKP
AKT1S1
ZCCHC8
APC2
RPS15
HEBP2
VPS8
NRG1
EPHB3
COPS7A
RETNLB
AHSG
DMWD
COL9A2
SPHK2
RPL18
FAM83E
NAIF1
OLFML1
AP1B1
NFX1
IER5L
TIAL1
NFIB
DHX8
FAM166A
TUBB4B
STPG3
CRYGB
FGD6
VEZT
TSNAXIP1
RANBP10
ACAP2
GOLGA6A
MEX3D
IGBP1
METTL7A
AP5S1
FGD3
TRMT2A
RANBP1
UNKL
SMARCC1
PSAP
NTRK3
KDM2A
CCAR1
ABR
OSBPL11
CHM
WBP1L
NWD1
NT5E
FAM160A1
FGFR2
DPYSL5
RMDN2
RPS6KB2
PTPRCAP
REEP6
PCSK4
ESRRA
CATSPERZ
CDK5RAP2
TTF1
CFAP77
TMEM205
CCDC159
RAB3D
MORF4L1
MUS81
CFL1
MAP3K7
ARHGAP19
MIDN
ATP5F1D
GJC1
TMEM221
TYW1
SBDS
ETV6
SCNN1A
LTBR
PRR16
SDE2
EMP1
BAZ2A
ATP5F1B
CLIP4
SPAST
KBTBD2
PFKM
TIGD6
HMGXB3
RFWD3
DUSP6
DDR1
GNA12
EIF1AX
ANO6
MTHFD1
CCDC88A
RAG2
IFTAP
PSMD3
FZD2
HEXIM2
VIT
SUFU
ACTR1A
ADAMTS10
NCOA4
TSEN2
PSPN
ALKBH7
ADAM23
PLA2G2F
ZBTB45
TRIM28
PELATON
SDF2L1
CCDC116
RIMKLB
TTC39B
SLX4IP
MKKS
TAGAP
UBE2N
CRMP1
ITGB1
TINAGL1
MAP3K5
EIF2B5
CCL28
LAYN
RSPH14
RAB36
PIGX
CEP19
TOP1
CBLC
CDC37L1
STN1
ERVH48-1
DNM2
NTMT1
C9orf50
PCBP2
SRBD1
AKR1A1
SH3GL1
CHAF1A
HNRNPUL1
GPR137
RAB11B
MYCL
LRRC8A
KYAT1
TCIM
RABL3
GTF2E1
TSPAN13
ADRM1
NEFH
NFE2L2
PKP2
CEP41
PTPN3
RAB5C
TNFAIP2
CHST12
UBL7
PPP6R1
RELA
NT5DC4
PLEKHG1
TSKS
AP2A1
RAB11FIP1
ITPK1
ACBD7
TIAF1
SWI5
GOLGA2
KRTAP3-2
WDR36
KRTAP3-1
CHSY1
OSER1
OSBPL1A
SDCCAG8
CEP170
KIF2C
C1QTNF5
TFB1M
CXCL5
RNF26
ACP7
M6PR
KLRG1
NACA2
RABGAP1L
RPL17-C18orf32
RPL17
C18orf32
YBX1
ERG
UBR2
PLCH1
SYNE2
SOX8
LMF1
VIPAS39
AHSA1
NAA80
IFRD2
HYAL3
ZNF609
SLC38A5
FTSJ1
ATG9A
ANKZF1
EIF3D
DGLUCY
IREB2
UQCRQ
GDF9
LEAP2
PPP1R12B
UBE2T
MAMSTR
KALRN
KRT5
EGR3
TUBB1
POLR3E
ME2
OTUD3
AAR2
KLK12
CTSZ
KLK11
KLK10
GOLGA6B
RAP1A
SLC7A11
SLC2A4
UNC93B1
ALDH3B1
PLA2G1B
SLC25A28
CSNK2A1
PLXDC2
ENDOG
ZNF92
SHBG
FXR2
TPM4
PALLD
KDM4A
LRRC72
PTPRH
MKRN1
DDX3X
ZNF195
SRP14
OIT3
TUBA1C
MAGT1
COX7B
C15orf40
TLE3
VGF
HIP1R
AP3M2
PRRG4
RANBP3L
KRT31
G3BP2
OXNAD1
DPH3
ACTL6A
ACVR1B
ZNF791
ZNF490
FOXN2
TNFSF13
SENP3
FOXP1
DUSP1
OLFML2A
NR6A1
TTF2
AP2M1
GCK
PRRC2B
CD2BP2
HNRNPC
LRRC23
ENO2
ZNF720
PCID2
CUL4A
TMEM44
EAPP
KMT5C
DIMT1
IPO11
XRCC5
TCERG1
MAP2K7
ZMPSTE24
TMCO2
PICK1
CELA2B
TMCC1
CTTNBP2NL
RAPGEF1
PELI1
POLR2M
ERCC1
RAB5B
PMEL
CDK2
CEP120
NUDCD2
HMMR
FZR1
POLDIP3
SVIL
MSL1
XXYLT1
EXPH5
TMEM52
CALML6
CDC42SE2
ZNF624
COX8A
CTH
CDK16
NEMP1
GPR158
TBC1D2
PQBP1
TIMM17B
HSD17B12
LCN12
FBXW5
C8G
COBLL1
TMC1
HECTD4
MYH11
DYNLT3
BORCS6
FEM1A
ZNF84
NDE1
MARF1
GSTM5
TRIP10
GPR108
TMCC2
RNF115
POLR3C
PPP4R1
ONECUT2
NASP
DNMT1
KRT9
KRT14
SELENOF
HS2ST1
ZNF24
PCYT1A
SYVN1
ETV1
DACT3
TCP11L1
CHST6
ZNF8
GINS1
ABHD12
NFATC3
ERRFI1
LRP8
UTP6
MFAP5
CCDC146
DIABLO
MCTS1
FAM3C
TRIOBP
ZNF513
SCAF1
RRAS
KLHL5
BUB1B
IP6K2
MEOX1
PLA2G3
MOV10L1
CEP97
CES1
ZNF428
SRRM5
KIAA0895L
EXOC3L1
E2F4
HSPA13
PHACTR2
DYRK1B
KCNAB2
KLF1
GCDH
DNASE2
NFIA
MORC3
EDN1
DOK3
DDX41
TRIM29
SOX6
RBM22
DYNLL1
C11orf58
RNF225
ZNF584
NACC2
MAP3K2
TMEM63C
MICALL1
CNPY2
ZDHHC12
AKAP14
KIFBP
SLC20A2
CCAR2
C8orf58
SYNGR4
ITGB4
S100A6
LDHA
OTUD5
DBNL
SMPD3
DNAJC18
TMC5
CCDC171
RNF217
TRAPPC9
PPP1R37
NRROS
TCOF1
TNK2
MRPS30
SSR3
FANCC
U2SURP
MYMK
MAP2K2
SLC4A2
H3C6
H2BC8
H2AC8
MAD2L1BP
GTPBP2
CDK5
ASIC3
TCF3
CD109
DNAJB5
UROD
HECTD3
SLC3A2
AHNAK
TM4SF1
WDR33
CEP20
EVI5
SLC25A45
FRMD8
TSPAN31
CDK4
AGAP2
PSKH1
NRN1L
TMEM107
SCOC
MTA3
KCNG3
PPM1B
SORT1
ZNF48
SIRT4
TBC1D10B
MYLPF
POU2F1
TPGS1
DIXDC1
TMEM138
CYB561A3
USP13
EOLA2
HSFX4
EMP3
INTS9
HMBOX1
ARF4
RAC3
DAAM1
TMEM33
RBMXL1
KYAT3
CENPX
LRRC45
STARD7
ADH5
CLDN22
CLDN24
CLDN8
NCBP2AS2
NCBP2
CTPS2
STAT2
APOF
BAIAP3
TSR3
GNPTG
TAF12
TAB2
MRPL34
DDA1
ABHD8
PRR14
FBRS
ZNF286A
NBL1
PARS2
SLC7A5
MPDU1
LOC100996842
SOX15
RPL15
HMGN4
METTL27
SYP
PRICKLE3