ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6101129 | hESC H9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◣ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SMARCA2
DPPA5
GDF11
ZNF483
RIPK1
TMPRSS11E
SOX6
ZNF343
TRIP4
PCLAF
ID1
ATF4
MIEF1
SGK1
REST
LRRC10B
TNS3
SPIC
RIF1
MED12
IL2RG
UGT1A6
UGT1A7
TERF1
ZBTB8OS
RBBP4
PIM2
ARHGEF38
JPT1
PDSS2
CLPB
OBI1
ZYG11A
NRG1
ESR2
FBXW11
FAM222B
WDR55
DND1
NCDN
KIAA0319L
CMIP
MTF2
CD99L2
CELF4
FAM200B
KLF5
UBAP2
MKRN1
SLC37A4
SOAT1
TARS1
SLC35A5
ATG3
SMPD1
RNASET2
SYBU
CMTM4
ZSWIM3
ACOT8
MSL2
ITGB3
NADK
CYP4A22
PUF60
NRBP2
CCR8
RMND5B
TNFSF8
ZBTB18
SPTLC2
MFSD4B
KDR
TIAM2
MRPL20
TCP1
MRPL18
PNLDC1
TUBB4A
NRROS
ATXN3
RPS24
NDUFV1
BIN2
DDX43
EIF1B
MYSM1
SLA2
CFLAR
PRICKLE1
PPEF2
ZNF34
ZNF517
RPL8
SLC23A2
PROM1
BTG2
SAMHD1
APOBEC3F
VENTX
UTF1
CCDC9
MSTO1
ANKRD1
AIRE
SSU72
TACSTD2
CCN3
EVA1B
AGO1
TRIM2
ETS1
FLVCR1
SPATA45
PYGB
SMAD7
SLC25A29
BICD1
DMXL1
VSIG10
STAG2
NES
TMPO
TALDO1
C10orf95
MFSD13A
TBCD
FN3K
KLHL3
PSMG3
MAGEA10-MAGEA5
MAGEA10
OAT
SLC16A10
LDB2
ABCC10
DUSP12
PCLO
PAX6
IER5L
SMC6
GEN1
C5orf60
RPS28
NDUFA7
CD320
OR4X1
KIF21A
CCDC130
NBPF12
MFHAS1
APELA
TEKT3
WDHD1
SOCS4
MUC4
MBOAT2
CPA2
LARP1B
PRPF39
PALM2AKAP2
ABL2
HSCB
CHEK2
ZNF696
LDAH
SCHIP1
CNR2
PRDM14
MT1E
SHC1
FLAD1
CKS1B
ZDHHC9
MBNL2
ZFP3
NDUFAB1
NANOGNB
CLEC4C
SALL4
C7orf50
ST3GAL6
GSN
MRS2
IRAK1BP1
APOBEC3G
PRODH
LOC102724788
SNAPC3
ABO
SIN3A
HOMEZ
PPP1R3E
ZNF398
SCGB1D1
SEPHS2
SPTY2D1
MTHFD1L
GLDC
DDX46
PARN
BFAR
HOXD11
HOXD13
HOXD12
CRYGB
ANAPC4
ATG9B
ABCB8
SRSF12
YIPF4
NLRC4
GLYATL1B
RBM8A
CARS1
ATAD3B
SNX19
CREB3L1
NSUN4
RASGRF2
FGD4
UNC13B
LRRTM4
PARP1
GOLGA7B
HAUS5
SNRPN
NLRP7
NBPF15
PMEPA1
FLVCR2
BDH1
SOX5
ENSA
ZNF552
PTAR1
DOCK1
DDX39A
PKN1
TDGF1
LRRC2
UPP1
NCBP3
PDCL
RMND1
ARMT1
NVL
MRPL22
GEMIN5
A2ML1
BLOC1S2
MCHR1
GABRQ
GARS1
ZMAT3
MOG
RPUSD3
PATE3
SLC2A11
CD9
ZNF318
FAN1
TFAP2C
SOX21
PTPRN
TULP2
NUCB1
TESK2
MMACHC
CCDC163
LRPAP1
PDCD7
CCDC169-SOHLH2
CCDC169
PRKAA1
FAM20A
PLEKHB2
TMC5
GRAMD1C
REEP6
PCSK4
SHCBP1L
ZFP64
TRAPPC8
TENT5B
RCN1
ZP2
LARP1
NBPF20
TRPV3
FRAT2
SFRP2
DEFB132
SGPP2
RASA1
ZCCHC4
MPZ
SDHC
ZNF875
GINS3
CSAD
ZNF740
METTL2B
ARRDC2
GNAI2
KRBA2
PTBP2
SH2D4B
TET3
AGL
GTDC1
FAM227A
CBY1
TMEM70
LY96
SLC35F6
CGN
CEBPZ
DERA
CACNA2D1
OR6C3
PRAMEF17
MAMDC2
SEPTIN5
ARHGAP19
SNTG1
TMEM229B
KDM2B
RNASE10
GAST
SSB
BCOR
KRT82
PSORS1C2
ATG5
PHC1
ITGB5
ID3
CCDC57
RASSF8
WDR33
HLA-F
COL17A1
ZNF469
ZNF729
SLCO4C1
PEX12
AP2B1
MORC1
PMS2
AIMP2
SLC66A2
HSBP1L1
SLC25A16
LHFPL5
CLPS
PRRC2B
FAM219A
DNAI1
ZNF532
TPCN2
GALNT8
TTC13
NCBP2AS2
NCBP2
DTD1
CNGA1
NIPAL1
PTPN12
C10orf99
SOX2
INTS9
HMBOX1
ASH2L
S100A2
DENR
KIFBP
ZNF100
IFRD1
SYN3
ZNF460
RNF135
CATIP
HARBI1
ATG13
ZNF565
MLN
HUS1
MGLL
HOXB1
ZSCAN10
PITPNM2
CNOT11
PRPS1
SESTD1
BRDT
PIGZ
IGF2BP2
WDR25
WARS1
ZNF335
PEAK1
HMG20A
MORF4L2
TTLL1
FCHO1
RPP14
HTD2
RBM22
NPSR1
FUBP1
DNAJB4
RAB42
SLC7A7
MRPL52
RTP3
UAP1L1
SAPCD2
OR2H2
ANGEL1
LRRC74A
MRGPRX3
NTAQ1
MBD4
IFT122
CTHRC1
PGAM1
C9orf85
ABHD17B
BASP1
LRFN5
TRIM5
TRIM22
KLRB1
CHRM2
TAF13
OR1E3
VANGL2
C1R
PIN4
DLX6
NFKB2
AASS
SLC35G4
ABCA13
FAM107A
LIPK
DNTT
HSF2
TRIML2
HCAR3
HCAR2
SNX4
FBXO40
MVB12A
BST2
TSACC
CCT3
PAAF1
MROH7
SLC6A8
PNCK
FUS
PLS3
FOXP1
ZC3HAV1
CEP44
AKAP7
GJA10
DYNLL2
C19orf25
NPAS1
SLTM
DCAF4L1
SLC30A9
ZNF649
TP53
WRAP53
LRTM2
FZD8
PINK1
APOC1
CCDC85A
IQCF2
IL34
ZNF75D
ETDC
GNPTAB
REM1
DEFB124
AKAP12
EXT1
ZNF106
SNAP23
NEPRO
TBL1XR1
IL1A
UTS2R
ALDH1A2
VIT
ZNF385B
SOX4
TXNDC15
BARD1
F7
IGFL4
MYRFL
CBX1
TBC1D22A
GALNT18
DUX4
AKIRIN2
GRAP2
PIAS4
RAB15
FNTB
DUSP29
STMN2
YAF2
ZNF90
SEC23B
RNF212B
OR6S1
LIMCH1
FIGLA
FGFR3
LRRN3
SRRM4
NECTIN4
MUC21
TULP4
CADPS
GIMAP5
SALL3
LEFTY2
ADAR
NR5A2
SEMA6D
S100A16
ORAI1
ST18
TOMM40
SCUBE2
RPGRIP1
RFC4
ATMIN
GCNT2
GUCA1A
THOC2
ZCCHC3
C20orf96
MS4A12
RNF19B
LIMS1
SLC25A12
NCKAP1L
FOXP4
ZNF43
ELP6
PRDX3
SULT1B1
SPDYE13
PHETA2
NAGA
CYP4A11
CLDN9
CLDN6
KRT8
CCDC149
DVL2
ACADVL
SFTPB
CCDC91
TMEM239
SKA3
MRPL57
RAB3GAP1
FASTKD1
PPIG
SLC3A2
FAM98A
MARS2
URM1
RIMKLB
VCX3A
DISP3
FGF4
B4GALNT2
INO80D
ACADS
NOTCH1
PRORP
PPP2R3C
CRH
DNMBP
GJA1
F11
BUB1
GCNT1
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
PLTP
IHH
OR6A2
SMAGP
SPRY2
DDX23
COL26A1
GLIPR2
PPP1R2
FXYD7
TBC1D1
RBP3
LRRC47
AMBRA1
KHDC1L
SPATA22
CEP85L
ASPA
HOPX
PLSCR4
VTA1
NMBR
F2RL1
SHISA5
TREX1
FANCA
SMIM31
FEZ2
L1TD1
SUMO3
SLC35G5
ZMAT2
SPATA13
PLAAT4
PNMA1
OR6J1
OR6C70
DAGLB
EOMES
ADA2
AHCYL2
SRP14
CTSC
ZNF562
CELF3
RIIAD1
BOD1L1
IGFBP1
SLC2A14
CXADR
RPL24
CYP1A1
MACROH2A1
ATG10
PCYOX1
SET
TUBB2A
CREBZF
MAML3
STX18
CHMP7
PRAMEF33
PGM2
LCA5
LBP
PLLP
PRKAR1A
LINGO1
DSP
FXN
RMDN2
ZNF675
CRACDL
GAD2
SPATA4
GP5
SMYD3
GCSAM
BRWD3
MYO5C
ULK4
GDF3
CCAR2
C8orf58
ZNF781
CCL24
PPP1R3B
HILPDA
OR5AR1
TRIM24
MAP3K19
HDAC9
FOXN3
ZC3H12B
CDYL
RTN4
SLC17A5
CLPP
CHI3L2
PI16
OR8S1
GOLGA6D
FAM83F
ZNF608
FAM193B
AK4
SLC38A9
IGFALS
KCNF1
FOXJ2
AHCY
BCKDK
PHF11
DUSP6
RWDD2B
CCDC60
GML
ACOT6
MT2A
MT3
APOBEC3D
APOBEC3C
CLDN4
METTL27
ZNF665
SDCBP
CAPN3
TBC1D14
SLC35E4
NAA50
ATP6V1A
FZD5
HS3ST2
TRIM56
CCDC200
DEFB107B
DEFB107A
RPTOR
SNX3
HLA-DRB5
FAM174B
CAAP1
FAM169A
GATA6
CRLF2
ZNF281
NAA30
NCOA7
ZNF486
NEB
PSRC1
ITPRIPL2
REEP1
ZNF28
ZC3H11A
ZBED6
INSM1
ATP6V0A1
CRELD1
UGP2
KIF16B
ESCO1
STMN1
SPIN1
CLEC2L
CSPP1
PRR15
ARID3B
ZMIZ2
OPN5
ZNF680
SLFN12
CCNT1
TEX49
IGSF23
SPAG5
ARHGAP42
RUBCN
IFT80
CTNNA3
EMC8
COX4I1
LRRC19
DLL3
METTL2A
KCTD7
AIP
MARCHF8
PHKB
ITFG1
MED15
EHD4
GEMIN6
OR5M8
P2RY12
HLA-A
ACYP2
PSME4
MPI
INO80C
LPCAT4
LYPD6B
TACC2
HNRNPA3
ALPL
AMOTL2
MAPRE3
GALK2
DEFB108B
STRA6
ITPKB
PRKAG2
CCL2
ACBD7
HOXB2
PRDX4
PEX5
ADCY6
SYT2
PTH1R
ETV4
MX2
OMP
XBP1
CACHD1
ZER1
TBC1D13
MIF
BEND3
MPP2
C22orf39
ATP9B
TSPAN13
HLA-DRB1
OR13A1
DPPA2
PGBD2
OPA3
OR8J3
OLFML2A
NR6A1
RPS7
MED13
SNURF
RANGAP1
RPL11
ZC3H7B
USP1
ZNF138
LDLRAD1
ZSCAN2
HYAL1
MESP2
FCGBP
GBX2
NFE2L3
NMUR1
ADCK1
ZNF600
FAM227B
CR1L
DUSP8
DTWD1
DPH6
SPATA6
GNAL
CHMP1B
TMEM202
NLRP12
TSKS
AP2A1
ATF7IP
FGFR2
SUCLA2
TRIM13
SERPINB6
TMEM150C
SRPK2
EPC1
TTC5
ZNF664-RFLNA
ZNF664
CCDC92
OR8B3
ETV1
GMCL2
CEP41
ATP6V1G1
HYOU1
VPS11
PRR13
SSH1
FXYD6-FXYD2
FXYD6
DUSP16
SLC35G3
CAPN2
ARL13A
GAS1
MAD2L2
DRAXIN
FERMT1
C5orf34
FZR1
RPS6KA2
HES2
RPGRIP1L
FTO
ESPN
KNG1
METTL16
TRIM60
SELENOV
PTPN2
DDX3X
PXDC1
TMEM170A
ZNF534
ST6GALNAC1
SCAPER
ATP6AP2
RNF225
ZNF584
EMSY
FOXI3
TRAF3
PNKD
ZNF624
COLEC11
XRCC6
DESI1
KANSL1L
TMEM247
AUH
CLEC9A
GAS6
SARDH
KMT5C
COX6B2
RPS3
TYSND1
VN1R4
SEC22B
CERCAM
MRFAP1L1
BLOC1S4
SRCIN1
LGR6
GSAP
GPR1
TFAP4
MOB2
FBP1
KLF7
COX8C
UNC79
BTBD7
GTF2A1L
ZNF432
SHPK
CTNS
CA13
TGIF2-RAB5IF
TGIF2
SAV1
AASDH
ZNF140
MTRNR2L1
C2
FOXE1
ORC2
OR8K5
ZNF18
IFNE
PPP2R5A
CKAP5
POLD1
ZFP42
EFNB2
PRTG
EPB41L1
SUCO
NANOG
ADAMTS16
RAPGEF1
SARS1
SGMS2
UQCRHL
PHB2
CASP8
SYTL4
CDX2
NACAD
THEM4
ZNF566
SPDYE7P
POM121