ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX130061 | BJ
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◣ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

KIF5C
MTRNR2L2
MSH3
DHFR
RGPD1
RGPD2
EEF1A1
MTRNR2L8
EMILIN2
ART1
MTRNR2L10
MTRNR2L1
MTRNR2L9
SEC63
VCPKMT
TESK2
MRM3
GLOD4
CD22
SOX21
DUX4
SLC22A14
MTRNR2L6
RNF125
TMEM87A
GANC
HPCAL1
PCGF3
EPB41L2
IQSEC3
ARHGAP8
SYNJ2BP-COX16
SYNJ2BP
OR6B3
MAMDC2
RASSF8
MGAT4A
TMEM128
C1orf185
HK1
SPON2
SNED1
GID4
ATPAF2
CEP164
BACE1
DEFB107B
DEFB107A
DEFB106B
DEFB106A
DEFB105B
DEFB105A
PTGER3
FOXP1
FIGNL1
CYP2U1
PCDH9
DDAH1
AURKAIP1
ZSWIM2
NCOA3
KCNIP1
OR10A6
FAM114A1
TERB2
DIPK1A
SHOX
KCNK1
ZNF397
TMEM242
ZAP70
OR4D1
PLEKHG7
MCF2L2
GTPBP8
LAYN
USP30
EPS8L3
PI4K2A
NBEAL1
FAM89A
ACSF2
RPL6
PTPN11
EXOC6
ERGIC2
MYLK
MUC5AC
CNGA1
NUTM2D
DRD1
AUTS2
RAB6A
FOS
NRCAM
TTBK2
FLRT2
FNDC3B
IQCH
AAGAB
OR7A17
NBPF1
FRMD5
WNT2B
ESM1
SLC16A7
GALNT5
OTUD7B
PTPN1
SIRT3
PSMD13
OSBPL9
PRDM10
CSPP1
OR2A4
CTAGE9
SH3BGRL2
KRT25
ESR1
TMEM42
TGM4
FIBIN
LOC102724770
DGCR6
CEP20
PRKACB
UNC5B
KIAA1586
SACS
TLR4
EXOSC8
ALG5
NETO2
PHOX2B
THAP1
ZSCAN30
DACT3
PTPRS
HLTF
LRRC70
RNF113B
CEP57L1
CAAP1
ADCY10
RTP3
NFAT5
LTF
MOK
KDM3A
GRIP1
SIK3
PPP1R1C
FAM222B
PCDHGA1
PCDHGA3
RBM34
PCDHGA2
FAM120B
MRPS35
ATP6V0E1
MAPK10
CERS6
DEFB132
SLC8A1
A4GNT
SSH2
LRRC37A
PPP2R5A
PF4V1
CXCL6
PDK4
ATP8A2
RAB23
PAICS
KDM4D
CWC15
SMC1B
RIBC2
SPATA13
MYO7A
ASXL2
TGM5
C9orf152
FRMD3
TMEM263
HMGB1
USPL1
ANKRD36B
FAM13A
ABCB1
NUTM2E
USP32
ALDH3A2
RAB3IP
MYC
MRGPRE
RXFP1
SAP18
ANKRD53
SPTLC2
DHCR24
AIG1
SEMG2
CDC42EP3
EIF2S1
ATP6V1D
ZNF80
HIGD1A
CCDC171
OR13C5
OR13C2
CHPF2
ABCF2
SPIDR
SPP2
DPH6
ZNF318
AMACR
GRHL1
EFR3A
SPRTN
EXOC8
PPIE
MCTP2
ABLIM1
UBR2
SLC2A12
NUP153
SLX4IP
MKKS
PFKP
TMEM59
NOP58
PDE6D
COPS7B
NDUFA12
SIGLEC15
SALL1
PITPNM2
DPP3
CLTA
TMEM196
EFCAB1
URGCP
KRTAP2-1
KRTAP1-1
KRTAP1-3
LSG1
FAM43A
ZNF615
UBE2D4
TMEM171
KIF4B
TAF4B
LAMB1
PERP
CMTM6
RHOB
GMPR
TRPC4
PRDM7
RASAL2
DIABLO
NREP
GSTM5
STEAP1B
CHAMP1
PHF7
BAP1
SLC9B2
RFPL4B
CR1
SRP14
YWHAZ
MRPL35
IMMT
KIF13B
NPM3
FGF8
WDR75
HSCB
CHEK2
RAB15
FNTB
BAAT
C2
USP35
KCTD21
KLKB1
NFATC3
C12orf56
EHMT2
CEACAM1
NFATC1
TIMM9
KIAA0586
DLL1
RAPGEF4
SETMAR
OR8B4
SORBS2
CDKAL1
H4C12
H4C11
PTPN18
NPFFR1
P4HTM
LRRN3
ARHGAP22
MAST2
RNASE4
ANG
SPATA6
ALKBH5
VPS35L
BZW2
ANKMY2
SLAIN1
MS4A2
CCDC28A
LSM5
AVL9
GTF2H2C_2
RCN2
GTF2H2
AGR2
SCAF4
RBFOX2
PTPRB
APAF1
IKBIP
SENP7
LATS1
NCR3LG1
VNN2
TSPAN13
IL17A
PPM1H
SF1
EIF2B3
RAD51AP2
RIMKLB
DTX4
ZNF562
HCRTR2
TMEM65
MIPOL1
TXNL1
PLAGL1
SH3GL3
TLCD1
PRDM2
KDM4A
SRPRB
DGKB
TNFRSF19
NEK8
DNAJB2
CIBAR1
GOLGA6L7
NIPA1
LMAN2
STPG2
FAM71E1
EMC10
NXT2
ZNF385B
MRGPRX3
CEP85
CEP78
UBE2D3
USB1
POPDC3
ZNF319
MYOT
ZNF565
DKK3
LPP
EPC1
RGL1
SLC10A1
NUDCD2
HMMR
HNRNPM
TAOK2
STEAP1
TMEM219
ARPC5
ROBO4
NLRP1
ABCA10
GOLGA6D
RERE
CAV1
SMARCE1
EPB41L5
GRB10
OR6Y1
KRT222
BCL11A
RALBP1
RABGAP1L
PATE1
MRPL33
PRCP
DDIAS
PROC
CDC42SE2
AKT2
EVC2
EVC
OR4F5
ARL5A
EXOC5
AP5M1
ALOX5AP
NAP1L1
OPRK1
PURA
NRBP1
FGF5
KRTCAP3
TCF4
CMAS
MED9
MICB
KRTAP2-4
KRTAP2-3
SCN11A
KRTAP2-2
SUCLG2
ZNF337
ZNF74
HDHD2
PDIA3
LIG4
ABHD13
SLC6A9
SRSF1
TPD52
THAP12
GVQW3
RHOBTB1
DPY19L2
DEFB134
SERINC5
ANXA3
SELENOI
ADGRF3
ZNF214
NLRP14
BORCS7
TET2
IFNA2
FBXL4
DNER
AS3MT
TBL1XR1
WLS
MNAT1
CDH2
GTF2H2C
SIX4
RAB21
SYT2
IL17RD
ABL2
S100A16
ZFYVE1
PRPF39
CYB5R2
S100A14
FBXO11
AHCYL1
STAM2
NEUROG2
NARS1
KANSL1
OTOF
OPALIN
PRIM2
OTUD1
CALU
B3GALNT1
PHGR1
SHISA9
OR6C2
CCDC9B
NRG1
ATXN3
C1GALT1
ARHGAP32
FAM228B
SF3B6
PPP1R12A
EID1
ARID1A
SLC25A17
USP34
LEPROTL1
CSAD
JMJD1C
SEC22B
DLC1
RRAS2
L2HGDH
DMAC2L
REEP3
TAAR2
DNAH12
CHGB
TYW1B
GPBP1
HGD
ZNF570
ZNF569
ARSJ
WASHC2C
PSMC6
RASGRP3
IGFL1
COL28A1
SOD2
WTAP
SLMAP
MTMR6
MYCBP
GJA9
FST
MMP16
FGD3
CCDC146
METTL3
WDR26
SMURF2
AGAP5
SESTD1
TAX1BP1
GOLGA6L10
RPS6KC1
LRRC36
VPS26B
NCAPD3
OGN
NCOA6
PDIA5
PLK4
GPR107
FNBP1
SEPTIN2
HDLBP
CMTM2
CMTM1
ANKRD10
BTBD10
SMIM14
RNASE9
PRKAA1
RNF217
RXRG
DMAP1
PSD3
TRIM9
TMEM252
SCG2
TARS1
SYN3
ELOVL5
SEC62
CCP110
SCO1
ADPRM
NME6
DDX52
ANXA2
HELB
MARCHF8
CLN6
USP50
ANTXR2
BTN3A2
CCSER2
MPHOSPH8
PPWD1
CENPK
HMCES
C18orf63
SOX2
LYPD6B
TSC22D1
UBE2K
PRR23D2
PRR23D1
POU6F1
WNK1
TEX36
DYNC2LI1
C3orf56
ZBTB2
PDE4B
PPP1R12B
FRAS1
MAP3K7CL
NCKAP1
ERBIN
SOX6
TUBB
MDC1
PADI2
TRIT1
IGDCC3
TMEM98
C11orf58
SP9
IGSF11
LRRFIP2
ARID1B
SEC22C
CNOT9
SKA2
PRR11
AOPEP
CMYA5
KRTAP10-7
NKTR
COPS4
FAM53B
COBLL1
URI1
FBXL20
ZNF746
BHLHA15
TEX55
KRTAP10-8
COL6A3
MSMP
UTP23
CALCRL
LDHA
CLEC12B
MND1
NEK5
CPM
LDHC
FBXL14
IL21
LOC389831
GXYLT1
NAAA
PHF3
TRAK1
MYRFL
CYCS
HACE1
RBM15B
MANF
SLC19A2
RIMS2
MTNR1B
NAV3
F13B
ERCC3
CALD1
ARHGAP24
PPP1R8
BAZ2B
YWHAE
LHX9
GOLGA6L3
CC2D2B
ODAPH
RAP1A
FRMD4A
SYT16
ZNF138
ZNF277
DOCK4
PJA2
PRRC2C
SPECC1
MPZL1
CPEB2
PRRC1
CCNC
ZNF852
SYNGAP1
SESN1
GOPC
DNAJC10
USP10
PSG11
MRPS9
G3BP1
NLRP10
ATOX1
SLC15A5
PMPCB
UBE2D1
ANKRD13D
DHX33
RFTN2
LRRC58
ALDH1L1
C10orf120
ENOX1
WASHC3
GORAB
ANKRD17
PIK3R1
POGK
L3MBTL1
SMLR1
NTRK2
MPZ
RNF20
MAML2
CNOT6
KIF15
KIAA1143
ENTPD7
NPY1R
GLRX2
RBM7
C11orf71
MSMO1
CDC73
TINF2
ZNF280D
GMPR2
NPY5R
GREB1L
STARD6
C18orf54
CROT
NEDD8-MDP1
NEDD8
NPC1L1
EFCAB3
HDAC9
STK31
TBC1D23
LYPLAL1
UACA
C2CD5
TCF12
PARP2
ZNF365
UFM1
TMED5
CCDC18
ATP13A3
XRN1
THBD
TAS2R14
SYBU
FOCAD
CORO2B
CDH11
TNIK
ANKS1B
TSEN15
TRIM23
TRAPPC13
SHLD3
ATG4C
GABRB1
SLC5A7
OR4F6
SPATC1L
AGPAT3
ANK3
PCDHGC5
FABP6
IGF1
STAU1
CADM2
DDX27
CCL28
CIZ1
FBXO25
SFXN2
ARL3
ZDHHC19
FAM50B
SPA17
SIAE
UBAP1L
SCAI
YY1AP1
DAP3
SLC43A3
TP53TG5
TTL
OR2K2
DDX46
CYTH1
ADAMTSL1
CREBL2
NHEJ1
FAM122A
SCG3
RREB1
PPM1D
COG6
RSAD1
SERPINA4
PSG6
ANKRD62
ECT2
KLF5
ZNF624
CNTLN
PRNP
CXXC1
IAPP
RETREG1
CDYL
FAR2
NEK3
SLC7A11
MEF2A
NSUN6
ARL5B
HNRNPR
RNF152
EPHB6
POC1B-GALNT4
EHBP1
HIF1A
FRG1
THYN1
ACAD8
VPS13D
RPN1
C16orf95
TNNI3K
KIAA0895
PHC2
DLX5
KBTBD6
CALHM4
MORF4L1
ATP6V0D2
KCTD1
G2E3
PTPRO
ANKRD50
SSX2IP
SLC10A7
ANLN
TRAPPC3L
SLC38A4
PIGL
NCOR1
FGF20
OR7D4
CLEC14A
AGAP4
SLC20A2
FMNL2
ENPP3
MERTK
CLOCK
CLASP2
MAGEF1
MED23
FBXW7
SNX9
NTN4
TCTE3
ERMARD
DGKH
LAMTOR5
COA3
CNTD1
SMIM19
ALPK1
PDE4D
ZNF189
MRPL50
CAPNS2
TEX46
KDM1A
SLC17A5
MIB1
SPAST
SEM1
YES1
PLA1A
ACIN1
C14orf119
STIM1
BUB3
DYNC1H1
LOC100287896
LIPT2
TMEM117
DYRK1A
DBT
STAT4
TMCC1
TIAM2
KRT86
ITM2B
FJX1
TSTD2
NCBP1
COL4A2
COL4A1
PIAS1
MFF
CD58
ELF1
PCSK5
ITGAV
NPM1
CCDC34
EHHADH
EIF5
FBXL17
SRP72
CHST9
PSG2
ADGRL2
MMS19
FAM20B
DDHD1
KATNBL1
GIMAP7
TTC9C
HNRNPUL2
ZNFX1
TFEC
CLSPN
BSPRY
RPP21
FABP9
TPBG
GLYATL2
EBLN2
BHMT
AUNIP
NACAD
SMCHD1
SRPK2
CDC6
TPD52L1
TTC7A
MCFD2
GTF2H5
TFAM
ARPC1A
NIPAL2
IGF1R
SDC2
TRA2A
SNUPN
C18orf12
SIPA1L2
GPATCH8
TMTC3
CEP290
IGFBP3
SKAP2
LRP1B
POLE4
GOLGA1
RAPGEF6
SLFN11
TAS2R39
ARL6IP1
TRPM6
TXLNB
REG4
GET1-SH3BGR
GET1
PARP16
ZNF304
SMN2
SMN1
ABCC2
CTSC
PHTF2
MSMB
UQCRH
LRRC41
SCGB1C1
ODF3
SSC5D
TMEM60
SREK1IP1
CWC27
GGA2
MAP10
ARMC5
TMTC2
ESPNL
ACER3
VPS33A
MCOLN2