ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5286341 | hESC WIBR2
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◣ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

SLA2
SMARCA2
ZNF483
APOBEC3F
TMPRSS11E
NRARP
SHC1
FLAD1
CKS1B
MED12
IL2RG
WDR55
DND1
SALL4
DPPA5
REST
VCAN
VENTX
UTF1
GDF11
NRG1
PSORS1C2
MAMDC2
MFSD4B
TENM4
NDUFA4L2
FAM222B
MAP2K3
ZSWIM3
ACOT8
TERF1
SGK1
PHC1
ZBTB8OS
RBBP4
DUX4
TMC5
MUC4
ESR2
RHOB
SOX6
ASIP
TCEAL3
ALDH1A2
RIPK1
RNASE6
EDDM3B
TRIP4
PCLAF
TDGF1
LRRC2
RCN1
PIM2
FRG2C
KLHL3
FOXP4
MORF4L2
TARS1
SAMHD1
EOMES
SOX2
LRRC10B
MRPL20
NR5A2
MTHFD1L
FAM227B
ISOC2
KHDRBS1
SYBU
BCOR
CDX2
SPIC
ZNF608
PEAK1
HMG20A
TRPC4AP
WFDC8
HPCAL1
SERINC5
ARHGEF38
C9orf85
ABHD17B
DDX46
TENT5B
CAAP1
SHCBP1L
CADPS
ZYG11A
BRWD3
OR6A2
LRRC36
ID3
GAD2
SNRPN
NAA50
ATP6V1A
DAGLB
MACROH2A1
GIMAP5
TRMT10C
DDX43
PSMD9
HPD
WDR25
WARS1
ARSL
TMPO
TCF7L1
FEZF2
SLTM
MTRNR2L1
UTS2
LOC102724770
DGCR6
SACS
ZNF780A
PRICKLE1
SLC35A5
ATG3
KIF11
HESX1
LARP1B
RPS24
IL34
FZR1
GLYATL1B
BEND3
ANAPC4
FAM227A
CBY1
PRMT2
FGF1
RNASET2
HOXB1
ENSA
POU5F1
DSP
HNRNPA3
SSB
LEFTY2
GSX2
KIF15
KIAA1143
NANOG
CELF4
NPSR1
KIF21A
OPALIN
FZD8
PITPNM2
GATA3
FRG2
TPCN2
RMND5B
SMPD1
DUSP6
ECE1
CNGA1
NIPAL1
FAM200B
KDR
ANXA2
SFRP2
COL17A1
TRAPPC8
ITGB3
DACT1
HELLS
CLCN4
CRYGB
ACOXL
ZNF398
CAPN3
PRSS48
ETS1
ZNF781
ZMAT2
MKRN1
LDB2
TMEM63A
LEFTY1
APOBEC3D
APOBEC3C
GABRQ
TSKS
AP2A1
BUB1
RASGRF2
ART1
SASH1
DUSP29
GSN
ZFYVE1
APOBEC3G
LIPK
IL13RA1
KIF5C
PRDM14
NTRK2
GATA6
ZSCAN2
SPRED2
HSCB
CHEK2
ANKRD1
SEMA6D
CPA2
KCNMB4
SLC2A14
NRROS
NMNAT2
SCGB3A2
TRIML2
ALDH2
MFHAS1
RAB40AL
FGD3
MBNL2
SGPP2
ITGB5
BCAT1
GAS1
BTG2
ZNF343
SLC35F6
BDH1
MAGEA10-MAGEA5
MAGEA10
MBOAT2
PIPOX
HOPX
PAK1
GCSAM
ATF4
RNF220
MIEF1
FUS
CDX4
DCAF4L1
SLC30A9
CSDE1
FAM174B
OLFML2A
NR6A1
UGT1A6
UGT1A7
IFRD1
UHRF1BP1L
PRPF39
OR5AR1
LRRTM4
NACAD
PYGB
CAPZA2
PHETA2
NAGA
TNS3
SHOX
LHX2
NBDY
SMC6
GEN1
SLC38A9
SLC34A1
PFN3
NDUFV1
SLC66A2
HSBP1L1
GLRA1
ARHGAP42
PLPP3
MTRNR2L8
ATP8A2
SMAGP
TBC1D22A
PUF60
NRBP2
RASA1
CRH
TUBB
MDC1
CYP2S1
ABO
C10orf95
MFSD13A
PROM1
PLSCR4
STOM
LRRN3
MYSM1
ZNF532
FOXI3
TET3
SCHIP1
CTNNA1
LRRTM2
NCOA5
SMAD7
GLDC
GCNT2
B4GALNT2
SGMS2
SLC7A5
OCM
DOCK1
TFAP4
EFNB2
OR2G2
SNURF
H3C15
H3C14
GTF2I
H2AC19
H2AC18
PCDHGB2
PCDHGA4
PCDHGB3
PCDHGA5
PDK1
PEA15
HCN1
RPGRIP1
RPRD1A
MTF2
CD9
SYT2
CRLF2
ZNF600
CACHD1
FLVCR1
SPATA45
ZDHHC14
MOB1A
MAP4K4
LHFPL5
CLPS
SRSF12
UBAP2
RPL21
EXT1
CFLAR
MSTO1
RNF17
ZNF674
GOLGA6D
CD99L2
SLC23A2
OSBPL2
CSGALNACT1
RPS3
FXN
LYPD6B
BRINP2
ASTN1
YIPF4
NLRC4
TRIM24
BICRA
LRRC70
SRRM4
CCDC169-SOHLH2
CCDC169
DNMT3B
GALNT8
C5orf60
SLC1A3
PSME3IP1
RSPRY1
ITPKB
TCEAL5
MTMR2
DNMBP
MDN1
FAM107A
ADAMTS16
CHGB
CSAD
ZNF740
SPATA13
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PPEF2
LRFN5
TRIT1
OLAH
SOCS3
NFE2L1
CCDC200
PRPS1
ARRDC2
PQBP1
TIMM17B
MED4
CT45A3
PLXDC2
ZBTB40
MVB12A
BST2
ANKRD40
LUC7L3
PTAR1
COL6A2
RBM22
HAUS6
KDM5B
ICMT
HES3
DNTT
BOD1L1
PLAAT4
TJAP1
DDX39A
PKN1
FAM136A
UBXN10
PLA2G2C
DNAJB2
GRIP1
NFE2L3
OR5K3
GPR21
LRRN1
SOX4
IFNE
KIFBP
OR7D2
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
PMEPA1
PIFO
SYN3
HHIP
SRPK2
STMN2
NES
SOX21
GOLGA6C
PER2
SIN3A
GCNT1
TMUB2
DIDO1
GID8
NDUFAB1
TMEM132B
CYP4A22
ZNF486
FGF4
MCHR1
TNIP1
LANCL3
MX2
PDCD7
ATXN7L3
BDH2
FOXP1
SYTL3
DYNLT1
SRD5A3
HDAC9
NBPF12
MICA
SOCS5
PTBP2
PCBP1
YAF2
SPATA2
RPP14
HTD2
TMEM70
LY96
PLAGL1
RBP3
PTMA
DMXL1
FZD2
UGP2
UQCRHL
CHFR
CCDC130
CMIP
GJA10
FZD10
FXYD6-FXYD2
FXYD6
SLC25A29
PLTP
RAD54L2
PGM2
LIMS4
LIMS3
NDUFAF3
IMPDH2
DALRD3
RIF1
SORBS2
AHCYL2
AMER2
GOLGA6B
CER1
AIRE
AKAP1
NAV2
MPZ
SDHC
FRMD7
EID3
OBI1
FGD4
JPT1
PDCL
UNC13B
WDHD1
SOCS4
ZNF565
CD200
SPRY2
TMEM68
TGS1
PPP3CC
LIMCH1
TCHP
PDE1B
CNBP
ARID2
LZTS1
SNX19
ZNF875
AJAP1
PTPN12
GUCA1A
NCBP3
PNMA1
GNA13
HOXB2
OR6Y1
PRKG1
TGIF2-RAB5IF
TGIF2
ERVH48-1
BLOC1S2
PSMB2
PARN
BFAR
TNFAIP6
AASS
NEBL
GPR85
GUCY2C
HUS1
NDUFB5
MRPL47
VCPKMT
C9orf135
GOLGA6A
PPAT
GXYLT1
BCL2L1
NKIRAS2
DNAJC7
MAP3K7
FBXW11
KLF5
GAST
AGO1
URM1
NDUFS5
AK4
TMEM167B
MAST1
CCDC9
NEUROG1
RTBDN
URGCP
URGCP-MRPS24
KNTC1
SLC2A11
PPP1R15A
IFIT3
SEC14L5
PLEKHG5
PRKAA1
GOLGA7B
HK2
CTTN
TJP3
PIP5K1C
TFCP2L1
OR2A4
CTAGE9
SALL3
RPUSD3
FIGLA
SMCO1
ZNF649
FOXD3
NAB1
PALM2AKAP2
KCNA4
ZP2
NSUN4
RNF135
ZNF770
ARL15
SCAF4
COX20
RXFP3
TPD52L3
BICD1
WDFY1
DENR
PTCH1
ZNF717
FOXB1
UPP1
EIF4G3
DNAJC25-GNG10
DNAJC25
GBX2
TUBB2A
GABRB3
TRIB2
PHAX
ALDH7A1
SAV1
CRYBB1
CDC42EP4
NATD1
LAPTM4B
RHBDD2
ZMIZ2
GABRR2
ZDHHC9
THOC2
SPATA4
RPS10-NUDT3
RPS10
ZKSCAN1
CANT1
TRIM14
TCL1B
PFKP
CD22
TNFRSF1A
RRNAD1
ISG20L2
DMAC1
DHDDS
ST18
APELA
FAM98A
SRP14
OR5H1
OR5H14
G6PC2
ZC3HAV1
ITPRID1
CCN3
RTP4
E2F7
STAG2
SPIRE1
SMCO2
CA5B
FAM120B
DLL1
PEX12
AP2B1
ARSG
SLC16A6
HEY2
SULT1B1
ADAR
ST3GAL6
NPS
PRRC2B
FAM168A
CTSF
ANKRD6
RESF1
C8orf76
ZFX
HMGB1
LMCD1
FBP1
EBF2
ASXL3
SFRP1
PTPRN
SLC25A16
CNR2
VSIG10
MT1X
C16orf78
MT1H
MT1G
GINS3
RAB4B
MIA
PHF8
OPA3
PRR14L
DEPDC5
HARBI1
ATG13
ABCF3
GML
IRF6
RNF138
AP2M1
FDFT1
DIP2C-AS1
PLXDC1
KNDC1
NBPF20
SDCBP
LPCAT4
NCBP2AS2
NCBP2
ZC3H12B
CLEC9A
CDK17
KRT34
ZNF75D
ETDC
KLRB1
ACSS3
OSBPL8
IL1RAPL2
RAPGEF1
MSL2
NARS1
ZBED1
DHRSX
ADO
SERPINB5
P2RY12
IQSEC3
XPNPEP1
CLDN9
CLDN6
SAMD5
TNRC18
LOC100129484
ADA2
AKIRIN2
PXDC1
RAB30
IL1A
BUB1B
RNASE10
C19orf25
PRDX3
SH2D4B
CCM2
SPTBN1
PMS2
AIMP2
STS
EGFL6
MAP1LC3B2
H2BC21
H2AC21
H2AC20
LRIG2
BOLA1
PRUNE2
GALNT11
CR1L
ECHDC1
UQCRH
LRRC41
TMCC3
MRS2
SLC20A2
TBCD
FN3K
RPS6KA2
SPEN
ZRSR2
PRCP
DDIAS
ZNF341
ID1
HCLS1
ATXN3
RAB15
FNTB
TBCA
SELENOT
TACSTD2
CDH4
IHH
GPR1
KLHL12
PPP1R16B
EXOSC9
NCOA7
TYSND1
NUP107
RPH3A
TALDO1
FGFR2
NLRP12
ONECUT2
PRODH
LOC102724788
DACT3
TKT
ZIC2
TCP11L1
SLCO4C1
RBPMS2
PIGZ
SLC38A3
SCGB1C1
ODF3
MKS1
LPO
TRMU
DNAJC14
ANOS1
RBM3
TTC13
ZFP3
RAB39B
PRORP
PPP2R3C
TRIM64B
ARHGEF10
LCA5
ABL2
LBP
USP32
THEM4
SLC17A5
SULT6B1
CEBPZOS
DUSP12
BIN2
ESCO1
TMEM52B
OLR1
ST8SIA4
FLRT2
DERA
CSRNP3
CEBPZ
RPL24
LRP6
CFHR4
CBFA2T2
PIN4
ADGRL2
MLN
ZNF217
ANKDD1B
BAZ2B
ELP1
ABITRAM
HELB
C1orf127
KMT2B
PARP1
TCP1
MRPL18
WDR36
S100A16
PNLDC1
HAUS5
EPB41L2
GPR150
HOXA1
MPI
H3C13
H2BC18
CRACDL
CASTOR2
PRR13
SLC6A12
RPS6KA5
SAMD4B
HOXA2
CEP192
ZNF805
AURKC
ITPRIP
FAM153B
TNRC6A
TRIM71
ANGEL1
LRRC74A
CALHM4
MRPL22
GEMIN5
NUCKS1
MAP3K1
MS4A12
HILPDA
CSF2RB
NRG2
POGZ
SOX5
PRKAG2
EPM2A
MAGEA11
H3C8
H2BC10
H4C8
CSNK1G3
SAMD13
ATG10
DDX3X
MTUS1
PCLO
ZBTB18
FAM20A
IGSF1
REM1
DEFB124
PDCD2
ARHGEF12
KANSL1L
OR8S1
CDC14B
GXYLT2
FAM180A
ZSCAN10
ZNF34
ZNF517
RPL8
REEP6
PCSK4
AKAP7
ADRM1
CARS1
VANGL1
RNF19B
PRR7
SLC35E4
C7orf50
NUP205
CATIP
ISL1
CDR2L
CDK2AP1
PRDX1
MSL1
ZNF878
RIPOR2
TMX4
MALSU1
PISD
UBR3
METTL5
SCGB1C2
PPP2R2A
PIGBOS1
PIGB
UPK1A
KCNIP4
SLC9A4
MKLN1
CMTM4
TAS2R46
OLFML3
ZNF100
KCNA3
METTL11B
TOX3
MANSC1
BORCS5
MTHFD2
HECW2
MOG
STMN1
FOXJ2
IQCH
AAGAB
ARAP3
ZIC4
MARCKS
KRT8
UAP1L1
SAPCD2
GALNT18
ZIC1
WDR44
C10orf99