ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX330107 | ReN-VM
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◣ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PMF1-BGLAP
PMF1
COL23A1
MAMDC2
AFAP1
NGB
PTPRN2
CYP4F11
SCML1
ACSL3
RGS19
OPRL1
LKAAEAR1
FRG2
FAH
MTF2
EPN1
LOC102724770
DGCR6
SNX16
ATXN2L
SACS
ART1
FAM240C
BTNL9
H3Y2
SERPINA5
TMEM216
FRG2C
SKIDA1
LOC105370980
OSBPL2
SLC6A5
IGFBP3
MUC3A
OR2T1
FLT4
C1orf198
PBX2
GPSM3
MAGEF1
TTYH1
ZFHX4
GADD45G
AZU1
PRTN3
UCKL1
CAMTA1
LFNG
MUC1
MSI1
HMGB1
LRP2
RTF1
ERLIN2
TMEM200B
ENPP3
PPP1R15B
NRARP
MMP8
SPIN1
ZNF229
CRYAA2
CRYAA
HDAC9
MID1
STK32C
LRRC27
APBB2
ONECUT2
CUEDC1
CAPRIN1
CSRNP2
GTPBP6
CSRNP1
LZTS1
C1orf216
ARID2
BZW2
ANKMY2
PDE4B
CSPG5
FABP7
SMPDL3A
CORO2B
KCNJ10
ITPK1
HES5
PANK4
PLEKHB1
LGR6
SLC6A9
IQSEC3
ZNF778
SLC22A31
TMEM167B
TAF13
NES
FEZF2
RPEL1
GPIHBP1
HNRNPDL
ENOPH1
KLF7
HMGN1
CCNG2
KRTAP4-12
KRTAP4-11
SOX21
FAM120B
DLL1
CITED2
ACSL6
CLASRP
TMEM242
DUX4
ARIH1
KDELR1
GRIN2D
LOC100996750
KRTAP4-7
ADAMTS9
RB1
RGR
LRIT1
RPS21
PHAX
ALDH7A1
OAZ2
ACSL1
KRTAP9-7
KRTAP9-6
SLC7A5
FAM181A
DRD4
BMF
ZNF775
BICD1
RTN4
TSPAN13
CDH11
OR10R2
OR10K1
EAPP
MEX3D
E2F1
SLC28A1
KRTAP4-4
KRTAP4-3
ZNF285
CDC34
RUBCNL
SMIM38
DPY19L1
DNMBP
DDX17
IQCH
AAGAB
ITPRIP
LRTM1
HBP1
FGFRL1
MTDH
TECRL
APP
IFIT1B
SNCAIP
ARHGAP11A-SCG5
ARHGAP11A
OR2A7
CTAGE8
CTAGE4
OR8U8
OR8U1
LPP
POU3F2
PCBP4
BCL9L
ABHD14B
ABHD14A-ACY1
ABHD14A
AGO1
RUNX1T1
GADD45A
NDRG2
USP2
TPPP2
RNASE13
ZNF277
DOCK4
VANGL2
FMNL3
CDK5R1
CNOT3
CRIP2
CRIP1
CTAGE15
SHF
TUBA1C
APC2
NEU4
KRTAP21-2
MRPS18B
ATAT1
ZNF717
PHF24
ADCYAP1R1
SLC15A3
ENO1
POTEH
KRTAP2-1
KRTAP1-1
KRTAP1-3
PYCR2
ARHGEF2
ADRM1
KLHDC8A
EPHX1
SIPA1L1
PTPRK
PNRC2
RHOJ
CDC27
STX6
FOXJ1
ACTR3B
CXXC5
PAQR6
LAMA5
BGLAP
ANKRD6
CDKN1A
NODAL
FRG1
TRIM2
ADAMTS14
KRTAP2-4
KRTAP2-3
LINGO1
GALR1
HIVEP3
KRTAP4-6
KRTAP4-5
COL6A2
MTNR1A
ODF4
CLEC19A
TRIB1
PLXNA2
GP6
FZD9
HES6
ADGRB2
PCDHB5
ZNF358
MCOLN1
POR
TEAD2
DKKL1
WNT1
RAB6B
RALGDS
TRIM8
UNC5A
KRTAP2-2
NDUFB5
MRPL47
KDM2A
RGS3
LRIG1
ADNP
NFIB
C16orf46
NCOA4
STAU2
TMPRSS5
FRMD5
KIF21A
MARCKS
HIP1
PTMA
LRRN1
MED25
FUZ
NUAK2
TP53INP1
LOC389831
UBTD2
KLF12
KCNQ3
PIPOX
WDR74
STX5
ESRRA
CATSPERZ
ZSWIM4
GABRR2
MYMX
SLC29A1
ATN1
ANKRD18B
PER2
DDR1
CRB2
NUDT19
KRTAP4-9
KRTAP4-8
TNRC18
LOC100129484
RIPOR3
OTUD3
RAP2B
TRAF3IP2
C1orf127
ICMT
HES3
FAM222A
PTGS1
TMEM88B
ANKRD65
TMEM114
VWA1
INMT
OTOP1
SFXN5
OSGIN1
FAM227A
CBY1
ITGB8
LMCD1
ZFHX3
FGFR2
VOPP1
EIF4A2
PREP
CP
CCDC88A
TTYH2
CDK5RAP2
RPL38
PALMD
LMO3
EHF
FAM89A
SLC38A3
NREP
PHYHIPL
NPDC1
ENTPD2
VPS4A
GAL3ST4
STAG3
GPC2
UNCX
AMMECR1L
USH1C
OTOG
TRMT2A
RANBP1
TRAPPC3
MAP7D1
CCDC200
ZBTB25
ZBTB1
OR2A4
CTAGE9
TAS2R41
DIP2C
TMEM132A
TMEM128
CNDP2
GFAP
PAX6
HPCAL1
IL2RB
C1QTNF6
CCSER1
PIGQ
NHLRC4
E2F6
C16orf96
PLCG1
GOLGA6L2
CD24
SDK1
PCDHB6
FGD3
CDC14B
MTRNR2L2
MSH3
DHFR
LIMCH1
SNAPC3
TCF7L2
PHRF1
UGT1A7
HSPH1
TRDMT1
KANK1
CRYBA1
DDX5
POU2F1
ZFP36
PLEKHG2
CYB5A
POLG2
SRSF6
CLEC18B
DOK5
MAP2K4
GAR1
C21orf91
UGT1A9
RRH
RNF44
CDHR2
PFKFB3
ZMIZ1
GPAT4
TMCC2
MLPH
SSTR1
PLK3
CYB561D1
TCTEX1D4
BTBD19
ATXN7L2
POU3F3
GPR37L1
CTDP1
MIDN
ATP5F1D
PLCB4
CLEC18A
SLC43A2
PTTG1IP
DYRK1B
FRAT1
UQCRC1
CNN3
ZNF763
SPATA3
CTAGE6
SLC3A2
AGRN
IRAG1
PLXNB1
TJAP1
TP53
CDK2AP1
OR4F17
MEGF9
DNAH1
TEPP
CNGB1
SLC19A3
IGSF9B
OR56A1
SOX6
GSN
SRSF7
EFNB2
CHD6
ZNF195
AHNAK
CEMIP2
ABAT
LTBP1
NHLH1
CXXC4
CREBZF
ZBTB7C
SOX8
LMF1
UBE2E3
PMPCB
ARL4C
BSX
KRTAP9-9
ARNT2
KRTAP9-3
PCDHA6
PCDHA5
KRTAP9-8
BCL2L10
GHRH
CNTFR
SPAAR
HRCT1
SHTN1
CASTOR2
TP53AIP1
RASSF4
NELFCD
WBP2
UNC13D
NIN
ACSS1
MAN2B2
POLR3E
TIMM22
FAM102A
SLIT1
ZSCAN2
VSTM2L
KRTAP1-4
KRTAP1-5
MYOG
TEDC1
OR4F4
ELOA2
ZFC3H1
THAP2
FOXD1
ACVR1
PDIA4
TCF4
OSBPL1A
ZSCAN9
POLB
PYDC5
IFI16
RGPD1
PDP1
FSCN1
KAT6A
TNFRSF11B
COLEC10
DERL1
ST7
RBPJ
ADO
C11orf91
ZNF606
IFI27
USP22
TCF7L1
PIMREG
AIPL1
EEF2K
PCDHB12
PCDHB10
PCDHB11
GOLGA6L7
LOC647264
POLDIP3
TRIM47
TUBB
MDC1
ID2
TEX2
OR2T7
PHLPP2
SPATA13
TMEFF1
TMPRSS7
ARF4
SENP8
MYO9A
RSF1
AAMDC
SP8
OTUD7B
PTPRD
NSUN6
ARL5B
LMO4
CXCR4
LMO2
GPC5
SLC16A9
ASB1
PHLDA2
BAGE4
BAGE3
BAGE
SIK3
ZCCHC24
NFE2L1
CARHSP1
COX20
SCD
OR1F1
DST
FILIP1L
THEM4
NLGN1
ZNF250
MAPK10
NR2F1
NR2E1
SYNRG
CCT7
ZNF703
HOXC9
ANP32E
OR52A1
OR52A5
SMARCA2
REST
CDX2
SOX2
TMPRSS11E
NAV2
NR5A2
DPPA5
SMAD7
PLAGL1
TERF1
CADPS
ARHGEF38
METTL11B
MTRNR2L8
ZNF483
ANKRD1
GAST
LRRC10B
MUC4
ID3
CACHD1
DUSP6
RPGRIP1
ATP1A4
ZBTB8OS
RBBP4
URM1
NRG1
SPRED2
NTRK2
APOBEC3F
RMND5B
RIPK1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
COL17A1
VENTX
UTF1
SFRP2
SOCS3
LRRN3
TENT5B
BCOR
SERINC5
FAM222B
MTRNR2L1
TARS1
ZNF608
IFRD1
GIMAP5
FGF1
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
ID1
PHC1
SRRM4
CD82
SSB
PRICKLE1
ANKRD10
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
TDGF1
MTHFD1L
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
LRRC2
SMCO1
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
DNMT3B
GRK6
SLTM
ETS1
NOTCH1
DMXL1
KLHL7
FBXW11
ABHD17B
SHISA5
PLPP2
NANOG
TREX1
UGT1A6
TALDO1
TNNI3K
GLYATL1B
ZNF436
KRT31
SMPD1
RNASET2
SCGB3A2
ETV1
MED12
IL2RG
HOXB1
HESX1
PMEPA1
KDR
CBFA2T2
CELF3
GBX2
RASGRF2
HSCB
CHEK2
RIIAD1
GLRA1
PPP1R16A
ZNF398
MRPL20
NADK
BCL2L1
FGD4
NFE2L3
FOXH1
GAS1
DDX43
HOPX
PSMD9
HPD
VCAN
ITPRID1
TRAPPC8
ETV4
GOLGA6B
KIF5C
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
TUBB2A
NRCAM
ZNF343
NCDN
KIAA0319L
CYP1A1
PPP1R16B
LDB2
FZR1
GNAI2
GOLGA6A
SCN5A
LEFTY2
PHF5A
ACO2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
STON1-GTF2A1L
LHPP
CER1
USP44
ATP8A2
RPS24
DAGLB
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
GPRC5B
TRIM24
GSX2
CSAD
LCA5
LIN28B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
KMT2B
FBP1
IL34
SYBU
DDX46
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
APBA2
CYTH2
PUF60
MKRN1
ZBTB40
CYP2S1
GCNT2
TMEM63A
ESRP1
MCCC1
PSMG3
FOXP1
SOX5
TMCC1
ATF4
FBXL19
FRAT2
RIF1
SLA2
CDC42EP3
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
PRDM14
MRS2
BFSP1
STN1
SGMS2
SAMD5
AMN1
SIPA1L2
TRIP4
PCLAF
FOXB1
GXYLT2
SGPP2
ZEB2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
FZD2
CRH
HGS
ARL16
MIEF1
WDR55
DND1
RASA1
ECE1
MDN1
NLRP12
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
CCT2
H3C15
H3C14
SPRY4
RFX4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
MAD2L2
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
EEF1A1
ALDH1A2
EBF2
DGLUCY
DUSP29
BEND3
DPH6
UQCRHL
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
MORF4L2
PIN4
CA6
KNDC1
C1orf100
FAM180A
AASS
CPA2
HMOX1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
KCNN2
SCARB1
WEE1
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
KIAA0895
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LRRTM4
LIN28A
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
NEBL
SRCIN1