ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10035162 | KYSE-140
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◣ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

ITGB8
KLHL6
ECT2
SMCO1
STK31
LYPD5
MCCC1
CTNNA1
LRRTM2
SOX21
COL4A2-AS2
ANKRD10
TMTC4
KRT31
SOWAHA
SHROOM1
MTF2
SPATA16
ANKRD35
NRCAM
MELTF
ZNF80
COL17A1
CPT1A
LTBP2
PPT1
LSM5
AVL9
NDUFB5
MRPL47
SUN1
HOXA9
HOXA10
HOXA7
MSMP
EAPP
LRRC72
ETV1
SMCO2
PRR15
NT5C3A
NAV2
GRK6
LMO3
HDAC9
TNFAIP2
FARP1
SLC10A1
NEBL
SH3BP4
OR13C5
OR13C2
PACSIN2
CYP2S1
NTN5
YEATS2
TPCN2
TTC39C
RNF183
FCHO1
KLHL24
LMCD1
ANKUB1
THOC3
CYTH2
PYCR2
RPGRIP1
GOT1L1
NAALADL2
IFRD1
HMGB1
KIF6
NPIPA1
PTPN3
CCR4
TNXB
C4B_2
C4B
CHSY1
CDKAL1
LYPLAL1
SSR3
OR7C1
OR7A5
OR7A10
COL4A2
COL4A1
FEZF2
SSUH2
PROSER2
CCDC83
PER2
ACAD9
ALPK2
CDC42EP3
RAB23
CTSV
SEMA4D
LIMK2
FGD3
MED25
FUZ
ZNF436
CCL26
CYP21A2
RAI14
ETV6
SMCP
INHBA
XXYLT1
MANSC1
BORCS5
SERPINA1
ARHGEF7
SDK1
KRTAP3-2
KRTAP3-1
CNP
RNF31
PSME2
EMC9
PSME1
RXFP1
NPIPA8
NPIPA7
RASAL2
OLFML1
HES1
TJAP1
ODC1
ABLIM1
PADI2
LTF
C1GALT1
LNX1
MANBAL
PUS7L
IRAK4
GALNT10
NTF3
VWCE
SEMA3D
SUV39H2
CYB5A
MAD1L1
ZNF609
CELF3
RIIAD1
DGLUCY
FAM3C
MFGE8
PDPN
HGS
ARL16
MUC13
ZNF428
SRRM5
UGT3A2
PXMP4
LFNG
PTPRB
FAM120B
CBX1
FAM220A
DYRK1B
FBL
CNTN1
HAUS6
RAPGEF5
ST6GALNAC2
SIPA1L2
MAP1B
PPP2R3A
ENKUR
ARID2
IFT80
SMC4
TAF1L
TNRC18
LOC100129484
SLC33A1
FAM89A
TRIM2
UACA
PSG1
CLDN10
PRPF4
CDC26
SYNGR2
UFD1
CDC45
ANKRD13D
OPN5
CLEC4F
HSBP1
CYB5R2
MATR3
ZNF57
POLR2M
PHF5A
ACO2
MAST4
PDIA4
TMCC1
APC2
RPS15
INSR
CSAD
ZNF740
NINJ2
PLEKHG1
PHYHD1
KMT2B
FXYD3
MMP20
SLC2A8
NRIP2
KRT86
GUCA1C
MUC1
PRXL2A
SLC20A2
TBC1D23
SLC25A27
CYP39A1
PALM2AKAP2
STMN1
FXR1
ZNF608
MARCKS
NADSYN1
DHCR7
FAM126A
POMT2
GSTZ1
NUAK2
CORO1C
MNAT1
CLRN1
ZNF148
GPRC5A
FGF12
MMP10
FKBP9
ALG8
TOMM40
ACAP2
GCNT2
PKP2
ZFR
ARHGEF5
CLIP1
PTMA
TAGLN2
PCID2
CUL4A
SPRY4
ETV4
IL7R
KRT13
RNF113A
NDUFA1
LGSN
KCTD4
FBXO27
LYRM1
DCUN1D3
LPIN1
RFC4
ECH1
MTHFD1L
ZSCAN2
ZDHHC3
EXOSC7
MEOX1
OGA
MYEOV
ARHGEF35
C3orf20
NME4
DECR2
SAXO1
RRAGA
TBC1D2
USP35
KCTD21
F11R
AHNAK2
SVIL
LECT2
POLDIP3
TMEM139
CASP2
TAB2
ABCC1
TEAD4
CHST6
KIF13A
PALMD
CLDND1
RABGAP1L
FLYWCH1
SLC25A11
RNF167
PFN1
GP1BA
DDX17
TIGD6
HMGXB3
PSMD5
FBXL19
C2orf88
PIF1
CPSF4L
SENP7
INPP5D
RNF152
LIFR
TIAF1
NPIPA3
NPIPA2
WDR36
OGFOD1
NUDT21
CAPNS2
NKD2
DST
ETFRF1
CFAP94
HES7
C1QTNF7
KBTBD6
TCP11L2
CD163
FAM227A
CBY1
PTBP2
RCOR1
NOS3
NOBOX
AGR2
JUP
LOC389831
MIDN
ATP5F1D
DACT2
ARHGAP8
MAP3K5
AGPAT3
UPK3B
MTURN
BTG1
LAMP1
DAGLB
PLEKHA1
TBC1D17
PNKP
AKT1S1
PRR16
CYTH1
CHST12
DYRK4
SLC35D2
RETNLB
GPBP1
FNIP2
CCDC57
MAP3K7
MAP11
LAMTOR4
PRDM14
SYT2
TMEM63C
ABCC10
CDR2L
KIAA0930
LGALS9C
NR1I3
EXOC6
MRPL36
NDUFS6
KBTBD2
SORT1
CALR3
C19orf44
SOCS3
PHACTR2
PAM
TMEM138
CYB561A3
RNF168
SYNE2
MORF4L1
ETHE1
RFLNA
PRORP
PPP2R3C
PLA2G4B
JMJD7-PLA2G4B
JMJD7
CLDN4
NIBAN2
DOCK9
HERC5
ACP7
WASF1
CDC40
SCD5
PLS1
PSPH
CCT6A
ZNF775
CD2BP2
NRARP
GAST
SYNCRIP
TMCC2
KCNJ15
CRYBB1
PTCD2
MRPS27
LVRN
WARS2
KIAA0040
CTSH
CUEDC1
SNRPE
FAM133B
PPP1R3G
TUBA1C
CHI3L2
CLUAP1
C16orf90
CDH13
TCTN2
TAF12
HNRNPA0
CA6
TRIB2
FLG
DLX5
GLI3
OTULIN
PER1
VAMP2
DMRT3
GNL2
ESRP1
PHF24
IQCH
AAGAB
PIK3R3
KRT6A
TMUB2
FAM102A
E2F1
TENM3
HERPUD2
C22orf15
NAAA
ZNF70
VPREB3
NTPCR
PLPP2
CCDC171
STK24
SDCBP2
OAZ2
CP
HAO2
IKZF3
STEAP1B
PLD1
CYP1A1
DDR1
SLC4A7
HSPB3
OIT3
ZNF503
ARHGAP5
NEK6
UNC13B
PSME3IP1
RSPRY1
H2AZ2
PPARG
NOX4
GPNMB
METTL7A
CCL24
YWHAG
WDR54
C2orf81
SIX2
PGRMC2
RPA3
ANKRD1
GET3
DUSP1
C7orf57
SMARCC1
TLN2
ID1
FGF19
MME
OR10S1
ITPRIP
SINHCAF
MEF2C
NOD1
BPHL
SETX
ISLR2
HEBP2
TTC39B
TUBB
MDC1
RIMKLB
PRKACB
DLGAP1
GAL3ST4
STAG3
GPC2
PPME1
C2CD3
COLCA2
NOTCH1
SMAD3
WDFY2
MTUS1
GTF3C3
C2orf66
TRPM7
ANAPC4
NKIRAS1
NR1D2
KRTAP19-3
KRTAP19-2
KRTAP19-1
ARHGDIB
MEIS3
CHMP5
BAG1
SHISA7
SOX2
FMNL3
NDE1
MARF1
ZBTB20
VGF
MT1F
MT1B
PNMA8A
SNAPC3
NWD1
RPL15
PCOLCE
MOSPD3
PLA1A
PLSCR2
DIABLO
NDUFS8
GSN
TSPAN13
CSTA
FOSL2
CEP20
ADAP1
TRMT2A
RANBP1
DKK3
PLEKHG3
SPX
PLD6
MSRA
ONECUT2
FBXO48
APLF
HPS3
XRRA1
SPCS2
RIPK1
KRT8
GOLIM4
ABO
LIMS1
PLA2G6
BAZ2A
ATP5F1B
GJC1
ARNTL
POLB
SHC3
KCNMB2
FOXJ3
GCHFR
C15orf62
HSD3B1
TGFBR2
C10orf67
PPP1R42
ASCL3
GSAP
UNK
H3-3B
SLC16A13
SLC16A11
TLX3
METRN
ANTKMT
FBXL16
DTD2
RAB40B
KCNK10
CYP2B6
DLG1
AK4
GMCL2
KNTC1
CALHM4
DCSTAMP
FAM91A1
PRKCI
FFAR3
GPR42
KDM2A
RFWD3
FREM2
NDST1
HIP1
CTNNAL1
SAXO2
EFL1
PBX2
GPSM3
LGALS8
MTMR1
PTPRS
RINT1
SLC25A25
RNF13
ARHGAP10
FZR1
BTBD10
CEP63
ANAPC13
SPAST
PARP16
SLC25A36
CRISPLD1
GLRX3
FAM241B
CAST
IGFL3
UPF1
PNKD
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SLCO1B3
CSTB
RRP1
NOL3
DIMT1
IPO11
KIAA0895L
EXOC3L1
E2F4
CHD1L
PHKB
ITFG1
EXOSC2
PRKAB2
BTF3
HACD3
ZFHX3
SPHK1
UBR2
LRRFIP2
LOC100505841
AMER3
ZBTB40
EGFR
COPS7A
KRT23
VIT
OR2H2
ERG
ABL2
HSPH1
FRAT1
SLC14A2
ZSWIM4
NFKBIA
ZMYM1
RADIL
HHAT
PLAGL1
ZNF304
NUAK1
CNKSR3
CYB561D1
DDX59
ATXN7L2
CRIP2
CCDC14
KCNJ16
LRCH1
TJP2
NPIPB5
METTL11B
CCDC80
GREB1
ICE1
CADPS
PRDM2
EFCAB12
C1QL3
WEE1
COL21A1
UMAD1
MYMK
KLF5
NUP160
TGFBI
VOPP1
SPPL2B
LSM7
ETF1
ROCK2
IL34
ACVR1
TMEM205
CCDC159
RAB3D
NOL6
EXOC2
FZD1
LAMTOR1
ANAPC15
S1PR3
GSTO1
C9orf47
ATG4C
ZFP92
HBP1
RIOX1
COTL1
CBLC
EDN1
APELA
SMAD5
NEURL1
CXCL13
LRIG1
ZNF77
PPP1R13B
HEXIM2
PAAF1
PTP4A1
GOLGB1
E4F1
TMEM128
FAM155A
C7
SOSTDC1
UPF2
DNASE1L2
GIMAP5
MPP3
CD300LG
GADD45G
STK32C
LRRC27
GDF5
CEP250
TNRC6B
AHSP
CCDC116
TMEM255A
FOXN2
IFIT1
COQ8A
GADD45A
KLHL13
PTER
VIM
BAHCC1
KLHDC8A
CLIP4
FAIM2
KRTAP5-11
TMEM221
NPIPB12
KRTAP5-10
RBFOX2
VPS37B
FRY
ITGB4
GTPBP6
RAB4B
MIA
NEMF
MCM7
AP4M1
NME7
BLZF1
ADH7
SLC39A5
RNF41
NABP2
CAV1
CAVIN1
IL1F10
SEL1L3
IL36RN
TSSK1B
CCDC130
NME1-NME2
NME1
SLC34A1
PFN3
MTHFD1
DHX8
RHOBTB2
CATSPER3
GBP6
SLC22A16
SREK1IP1
CWC27
C12orf43
FBXO17
PAQR8
GPR33
IL22RA1
CDC5L
GUK1
SRP68
ITGB1
MAP3K9
GRAMD1C
DNM1L
COX8C
SMUG1
LRRIQ4
LRRC34
NACA2
ANAPC10
ABCE1
ZNF770
NSUN3
DHFR2
NPIPB8
PIPOX
TES
ITPK1
AKAP9
RNF20
TBX4
VARS2
GTF2H4
CEP120
ATAD3A
ZWINT
RFC5
MEGF8
STARD7
DCUN1D1
GRK5
CSRNP2
ARHGEF19
DNAH5
HLA-E
CNOT11
RAB30
PAN2
IL23A
TNFAIP8
KIF23
CERS3
RARB
ESRRA
CATSPERZ
SH3PXD2A
SEL1L
MYLK
PIN4
NASP
CHMP4B
TEX101
MCM10
NAP1L4
GSTM5
AHR
MIS18BP1
SERPINB13
ANGPT1
EXOC5
AP5M1
MAP3K20
ITGBL1
PIK3R4
EIF3B
LCA5
ERV3-1-ZNF117
ERV3-1
TMEM200B
PACRGL
SLC45A4
KRT19
KRT15
SLC25A47
NPIPA5
ARID5B
TEN1
ACOX1
LRRC25
OR1K1
TCF25
LMNA
EFNB2
CDK12
MED1
PPFIBP2
NPM3
FGF8
DENND1B
CCDC184
BTC
SYBU
EMSY
YLPM1
BZW2
ANKMY2
PIGX
CEP19
DHRS7
GET4
IKBKB
DDX3X
CFAP20
ARSG
SLC16A6
PRTFDC1
TRPV4
FOXK1
CSK
RSF1
AAMDC
KDM4A
DNAH2
NT5E
KIRREL3
CMYA5
BRD4
PSMC3IP
UBA3
ARL6IP5
DUSP6
SFPQ
SFXN1
H3C6
H2BC8
H2AC8
KIF2C
MED9
EMP2
AKNA
NPFFR1
TMEM37
TRIM77
FZD2
RPL27
IFI35
HEXB
ELL
EXOSC5
BCKDHA
DOCK5
TTC6
VWA5B2
FOXA1
GBP5
ISL2
DNAJB1
TECR
SLAIN1
C12orf73
TDG
GDPD5
MRPL21
IGHMBP2
GNA12
HNRNPDL
ENOPH1
CCDC38
AMDHD1
BAZ1B
NPIPB13
FAM222B