ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6852810 | HCC95
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◣ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
ITGB8
LOC102724770
DGCR6
PIGX
CEP19
SMCO1
KRT31
PYCR2
CCDC38
AMDHD1
HES1
MANBAL
COL17A1
PAMR1
CP
MBNL1
NDUFB5
MRPL47
THOC3
BTBD3
SOX2
CAPNS2
LMCD1
CDKAL1
VWCE
SDK1
NAV2
CPSF4L
FJX1
GRK6
OLFML1
RPGRIP1
LYRM1
DCUN1D3
ANKRD10
PCCA
MTF2
RFLNA
ABCC1
F11R
ARSG
SLC16A6
TES
EVA1A
MMP20
GADD45G
LCLAT1
CCZ1
DUX4
TNRC18
LOC100129484
LIMK2
ZNF775
MAP3K7
PTMA
ANKRD1
VIT
CYP24A1
HMGB1
MED25
FUZ
SLC20A2
CYP1A1
ZNF770
PXMP4
ZNF341
SMCP
NWD1
PSPH
CCT6A
KRT16
CDC42EP3
SGPP2
ITGB4
FAM227A
CBY1
SSR3
MANSC1
BORCS5
KMT2B
ANXA11
SYT2
KIF6
LBH
HGS
ARL16
EPB41L1
TAGLN2
TM4SF1
HERPUD2
GOLPH3L
PLPP2
RAG2
IFTAP
ARID2
PPP1R13B
ALPK2
ARID5B
PLA2G4B
JMJD7-PLA2G4B
JMJD7
ZNF503
FXYD3
FGD3
CNP
NFE2L2
TM4SF20
UNC13B
MEOX1
NOTCH1
BCL2L1
SAXO2
EFL1
PLSCR2
UGT1A6
SH3PXD2A
ACVR1
CHST6
ERLIN2
NME1-NME2
NME1
DDX17
CYP2S1
TNXB
C4B_2
C4B
FBXO27
PPP3R1
ETV1
CEP41
DST
TRMT2A
RANBP1
WDFY2
CDR2L
CYP21A2
C1QTNF7
SIPA1L2
PHF5A
ACO2
CEMIP
CTSV
CHSY1
TMEM17
RNF13
JUP
KIF13A
BMP7
CUEDC1
FAM102A
ADH7
GAST
ZNF608
ZBTB34
SCPEP1
ABCC10
SNX31
TJAP1
IGFBP2
FCHO1
LAMP1
ST6GALNAC2
MMP10
PSG1
IQCH
AAGAB
SMAP1
ETV4
ZMYM1
OGN
SMCO2
SERPIND1
NDE1
MARF1
SPDL1
ZSCAN2
NOS3
HOPX
PER2
IKBKB
LCA5
AGPAT3
UBTD2
TMEM132A
TRIM2
IFRD1
PYGB
IFT80
TPM1
CYTH1
SMC4
MNT
NFIB
PLD1
HOMER2
SAR1B
NINJ2
SEM1
ALK
PLEKHG1
NIBAN2
MARCKS
KANK1
CORO1C
KCNN2
KDM5B
AADAC
RNF183
PHACTR2
SDC1
ZNF423
SIX2
ABCC2
PPDPF
TCP11L2
MTMR1
CLDN4
TMEM200B
SPAST
NUP153
KIF14
ID1
EHF
SNRPE
FOXN2
LFNG
SMAD3
SLC2A8
SUN1
FIGNL1
TLK2
CNTN1
IER3IP1
ST6GALNAC1
TUT7
SLC7A5
SLC25A25
NAIF1
CHCHD10
LRP11
HDAC9
EXT1
DDX5
POLG2
RMI1
HNRNPK
SEMA3D
NAA35
LGALS7
ZFAND3
DENND4A
ARNTL
CCT2
POLR2M
MS4A2
SMARCA2
DUSP1
THG1L
LSM11
DHX8
LPP
GALNT11
UACA
DYNC2I1
ESYT2
BST1
NRCAM
SHF
YEATS2
NKIRAS1
NR1D2
CSTA
MTRNR2L8
MCCC1
PTPRB
OGA
POMT2
GSTZ1
STK3
OSR2
KCNJ15
LRRC18
FDXACB1
C11orf1
ALG9
P2RY12
PTCHD4
ADGRL1
CAMKK2
DMRT2
P2RY13
FOXP1
DAGLB
MAST4
RDX
KRT86
TBC1D2
GSTO1
UAP1L1
SAPCD2
CHST12
SLCO1B3
ERG
TTC39C
SLC44A1
MMP13
RABGAP1L
RNF152
IBTK
CYP3A7-CYP3A51P
CYP3A7
BFSP1
TUBA1C
MPP3
CD300LG
TMUB2
MNAT1
CAPRIN1
KLHL6
KRTAP3-2
KRTAP3-1
KRT74
SMARCAD1
RAP1A
NPIPB12
GPR87
UNK
H3-3B
MUS81
CFL1
BAHCC1
OIT3
ZNF436
CBX1
VGF
TRPV4
EXOC6B
GPC1
ZCCHC3
C20orf96
ONECUT2
ACYP2
PSME4
SNCA
SPIN1
RPL27
IFI35
LAPTM4B
KIAA0040
GGH
VDAC2
TP53AIP1
PGAP4
EMP2
WDR74
STX5
MRPS18B
ATAT1
OTOGL
MAMDC2
EIF4A2
UBR2
UNC5A
FGF1
GET3
HMGN1
PEDS1-UBE2V1
PEDS1
C3orf20
SPTSSA
CD44
CEP20
IL1F10
IL36RN
KIF22
ZG16
CCL26
DLGAP1
OR7C1
OR7A5
OR7A10
NELFCD
SYNCRIP
EFNB2
TRMT1
NACC1
OR5K3
SH3BP4
TMX2
MED19
TJP2
NTN5
LRRC72
S100A6
WDR91
FMN1
CLSPN
CTTNBP2NL
FGD6
VEZT
CHD1L
PRKAB2
TACC2
N4BP1
LDLRAD3
CHD6
CCDC57
CDK5R1
OSER1
MSMB
EGFR
KLHL38
CDH13
RAPGEFL1
ZDHHC3
EXOSC7
LAMA1
ETFB
RFWD3
DUSP29
ABLIM1
MAP11
BAG3
LAMTOR4
NACA2
IGF1R
PMEPA1
GDF5
CEP250
HSBP1
SYCP2
FAM217B
KIF21B
WDR49
MSANTD4
LSM5
AVL9
MUC20
SLC9A8
TEX26
CPN1
ECT2
TMEM139
CASP2
PHF20
LCE3B
LCE3A
ZFC3H1
THAP2
KLF5
ACTR2
SLC9A9
ZNF703
CLNS1A
POLB
SLC7A11
UBALD2
PARP8
CES3
ISL2
CTXN3
MERTK
DLX5
CDIN1
TAL2
COL23A1
ESRRA
CATSPERZ
GRAMD1C
KRT13
KDM2A
ADRM1
CLDND1
NT5C2
PRDM2
S1PR3
C9orf47
GOLGA6C
RAPGEF5
TNFAIP8
DGLUCY
SCNN1A
LTBR
ERV3-1-ZNF117
ERV3-1
CHMP4B
CTDSP2
NPIPB8
ART1
NAAA
BCL3
SOST
ID3
DDR1
CLUAP1
C16orf90
FNIP2
SLC4A7
ETF1
OPA1
SLC6A2
LRRFIP2
DMRTA2
WWTR1
KRT19
KRT15
ADH5
ETHE1
SGTB
NLN
NFATC3
PIN4
PPP2R3A
GRAMD2B
TCF12
PNKD
TP53BP1
ITPKB
METTL7A
GGT1
ARHGEF19
SNAPC3
SERPINA1
ETFRF1
CFAP94
TMEM138
CYB561A3
GSN
EAPP
CRISPLD1
VRK2
IQGAP1
COLGALT2
MYH11
SYBU
ABO
PDC
CERS3
FRG2C
MTHFD1L
MEF2C
RIMKLB
ZNF609
ZNF277
DOCK4
OSCP1
SLC6A1
ZBTB40
STEAP3
ALDH3A1
LNX1
KLHL5
MCM7
AP4M1
GPAT4
TMEM254
SFR1
PIK3C2A
RBBP9
PALMD
SEC23B
TP63
CNN3
MTUS1
TTF2
AHR
STK31
RNF43
ACSS1
PCYT1A
NPIPB13
SPRED2
SPRY4
TSKS
AP2A1
POLR3E
CELA3B
C1orf105
SIX4
UFD1
CDC45
BCAT1
SHC3
DSC2
MME
TAF1L
FILIP1L
DNAJB1
TECR
RABGAP1
SFXN1
CMSS1
NPIPA8
NPIPA7
KMT5A
SPO11
SLC25A28
LTBP2
CD163
SPTLC2
GLB1L3
IGFL4
RBM47
GNA13
ANTXR1
IGSF3
ESRP1
MIDEAS
IL1A
HNRNPUL1
ZFR
FAM83G
PELO
ITGA1
TJP1
CASD1
SOD3
IGFL3
PDIA4
BCO1
PCYOX1
TIA1
HLTF
EHD4
HBP1
REXO2
CCDC43
CC2D1B
TTC7A
MCFD2
ERAP1
TPST2
ABTB2
TACC1
PROSER1
NHLRC3
LOC100505841
SCOC
AMN1
CYB5A
COA6
RAB12
C12orf43
TGIF1
KIAA1549
KIF23
XPA
BCL2L13
COL7A1
ATP6V1E1
STON1-GTF2A1L
QSER1
STON1
ENTPD6
CAV1
STARD7
PLCB4
PPP4R1
RTP1
IL10RA
PHAX
ALDH7A1
CAVIN1
OTOP3
ZMIZ2
SMAD5
SGK3
MICALL1
TUT1
MTA2
REST
CDX2
NES
TMPRSS11E
NR5A2
SACS
DPPA5
SMAD7
PLAGL1
SOX21
TERF1
SOX6
PIPOX
CADPS
ARHGEF38
METTL11B
DNMBP
ZNF483
LRRC10B
MUC4
MUC1
CACHD1
DUSP6
AGO1
ATP1A4
ZBTB8OS
RBBP4
URM1
NRG1
NTRK2
TCF7L1
APOBEC3F
RMND5B
RIPK1
LRRN1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
VENTX
UTF1
SFRP2
SOCS3
LRRN3
TENT5B
BCOR
SERINC5
FAM222B
MTRNR2L1
TARS1
GIMAP5
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
PHC1
SRRM4
CD82
SSB
FRG2
PRICKLE1
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
TDGF1
KIF21A
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
LRRC2
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
DNMT3B
ZFHX3
SLTM
ETS1
DMXL1
KLHL7
FBXW11
ABHD17B
SHISA5
NANOG
TREX1
TALDO1
TNNI3K
GLYATL1B
SMPD1
RNASET2
LZTS1
SCGB3A2
MED12
IL2RG
HOXB1
HESX1
KDR
CBFA2T2
CELF3
GBX2
RASGRF2
HSCB
CHEK2
RIIAD1
GLRA1
PPP1R16A
ZNF398
MRPL20
FGFR2
NADK
FGD4
NFE2L3
FOXH1
GAS1
DDX43
PSMD9
HPD
VCAN
ITPRID1
TRAPPC8
GOLGA6B
KIF5C
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
TUBB2A
ZNF343
NCDN
KIAA0319L
PPP1R16B
LDB2
FZR1
GNAI2
GOLGA6A
SCN5A
LEFTY2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
LHPP
CER1
USP44
ATP8A2
RPS24
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
GPRC5B
C1orf127
TRIM24
GSX2
ICMT
HES3
FAM120B
CSAD
CDC14B
LIN28B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
MTRNR2L2
MSH3
DHFR
FBP1
LIMCH1
IL34
PBX2
GPSM3
DDX46
TESK2
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
APBA2
CYTH2
PUF60
MKRN1
GCNT2
TMEM63A
PHLPP2
PSMG3
SOX5
TMCC1
ATF4
FBXL19
LINGO1
FRAT2
RIF1
SLA2
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
MRS2
STN1
NFE2L1
SGMS2
SAMD5
ITPRIP
TRIP4
PCLAF
FOXB1
GXYLT2
ZEB2
FBXO40
HOXD11
SALL3
MACROH2A1
FZD2
CRH
MIEF1
WDR55
DND1
RASA1
ECE1
MDN1
NLRP12
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
LRRTM3
SORBS2
WNT5B
ATG3
ZNF532
JPT1
SMC6
GEN1
UGP2
WBP1L
PDPN
H3C15
H3C14
RFX4
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
ITGB5
PRR15
APOBEC3D
APOBEC3C
VOPP1
MAD2L2
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ST18
EOMES
DHX32
TOMM40
MID1
PDCL
POSTN
DRAXIN
GABRB3
SH3GL1
CHAF1A
EEF1A1
CD24
ALDH1A2
EBF2
BEND3
DPH6
UQCRHL
COMMD7
TMC5
MLEC
PCBP1
CHFR
CDYL
SASH1
LMNA
MORF4L2
CA6