ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6750798 | MDA-MB-231
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◣ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

TNFRSF6B
FRG2C
NRARP
FRG2
RPEL1
BTNL9
DUX4
DRD4
TMEM242
FAM227A
CBY1
MTF2
COL23A1
PIRT
MMP8
SPATC1L
GALR1
MUC1
MTRNR2L1
CGRRF1
CYP4F11
FAM153B
COL6A2
EEF1A1
ZFAND3
NTPCR
C12orf50
C12orf29
CBWD5
NUDT4B
FAM240C
SOX2
PRDM4
C6orf89
PPIL1
HGC6.3
GOLGA6L10
CXCL3
POLR2K
SPAG1
NUDCD1
TTC12
CBWD3
CBWD6
ELMOD2
WDHD1
SOCS4
ARHGAP39
ADGRB3
SAYSD1
SRPK1
NBPF1
GNPTAB
NUDT4
TMEM14B
RGS19
OPRL1
LKAAEAR1
PERM1
BIRC2
H3C13
H2BC18
NPDC1
ENTPD2
MOCS1
EBAG9
PPARD
TMEM217
TBC1D22B
KRCC1
NTS
RBM19
TMEM71
PHF20L1
SAGE1
CT45A10
MSRB2
EMC2
POLR2J3
NOTCH2NLA
GPAM
MTMR2
FANCL
WASHC4
RTRAF
LMBRD1
ATL1
SART1
MAP4K5
TFAP2A
ZSCAN30
STARD4
DAZ4
DAZ1
NUF2
MTCH1
ZNF322
DENR
IRF2BP2
PCMTD2
AARD
HCFC2
GLT8D2
PSMB8
TAP2
TRPS1
FBXO43
ARL14EP
MIER1
DNAI4
TMEM260
PPP1R12A
DAB1
OMA1
SH3TC2
LYSMD3
LOC389831
ZNF451
ZNF330
HIVEP1
DDX10
THAP9
SEC31A
FANCE
ZNF311
TMEM30A
ANKRD46
GPR89A
FDXACB1
C11orf1
ALG9
SPATA33
PSMD6
PLA2G6
ATG14
CYP2E1
ZSCAN31
CDC7
SECISBP2
CKS2
FANK1
TNFRSF11B
COLEC10
MNAT1
CHST10
KIAA1586
TBC1D7-LOC100130357
TBC1D7
COMMD10
TCF7L2
MTHFD2L
EXOC5
AP5M1
LYRM9
SUPV3L1
GALC
RANBP17
FILIP1L
HLA-DRB1
TTC29
CMTR1
GMNC
UTP20
SLC35B3
FRMD4B
SNRNP48
GAGE2C
GAGE2B
GAGE2A
GAGE1
GAGE12H
GAGE12E
GAGE12D
GAGE12C
FAM200B
PIK3CA
ZC2HC1C
ACYP1
CNIH1
PLEKHH2
JRKL
CCDC82
NRAS
ATG10
ACYP2
SESN3
MGAT4C
STK38
KDM4D
CWC15
SCFD1
DDX1
NAF1
ZNF391
COL21A1
SEC62
CR2
NAT10
CRYAA2
CRYAA
ZNF202
DLG2
EFHC1
UTP23
TMEM126B
SMARCA5
LRRCC1
LRRC39
C12orf75
ZNF76
SIK2
ARFGEF2
LMCD1
SPATA7
PCTP
TSEN15
KRTAP4-9
KRTAP4-8
SERF1B
SERF1A
LRRC1
FDX1
UBR2
PRMT2
MECOM
NEDD1
HMGCS1
NAPG
KRTAP3-2
ZNF184
FRA10AC1
BAG2
H4C2
MRPL27
EME1
TEX9
KRT40
H3C2
H2AC4
GORAB
RPP30
MFAP3
FAM114A2
GLRA3
MMUT
CENPQ
KRTAP3-3
SLC35C2
CTTNBP2NL
SLC26A8
MAPK14
DCAF4L1
SLC30A9
TRIM44
HSD17B12
PAK1IP1
C6orf52
FBXL5
GFPT1
ZBED8
SMC6
GEN1
CCDC167
TAF4B
RPUSD4
FAM118B
RNF38
COMMD8
DPH5
LHX9
NIPSNAP3A
RNF103
C1orf53
CPQ
AFF1
CCDC88A
OSER1
DNMT1
RLF
RABEP1
MED20
BYSL
MTERF2
RNF19A
GOSR2
PTGS2
CD83
RABGGTB
OXR1
UBE2D1
PRKN
PACRG
OXNAD1
DPH3
CRADD
FBXO48
APLF
FRMD6
GTF2H1
SCN11A
HPS5
RTKN2
NME6
WDR48
ISOC1
SNX13
COPRS
ADGRA1
HACL1
BTD
ZFP69B
CLEC12A
LSM6
MLH3
TTC32
KIAA1109
ACTR5
RNF8
AREG
EXT1
USP53
PTP4A1
EPN1
PAQR3
KIF2A
DSN1
GRPEL2
TCTE3
ERMARD
PXT1
KCTD20
VSTM5
MTREX
DHX29
SCYL2
DEPDC4
OARD1
NFYA
MAML2
GBE1
PRRC1
TEX10
KRT10
GMNN
CCN3
TP53RK
PGBD2
TMC1
CAST
SLC13A3
STX7
KIFAP3
CEP126
ANGPTL5
ATXN7
PANX1
ZSCAN16
RBM7
C11orf71
MAPKAP1
SHPRH
UFL1
RPL7
RDH10
SNX2
FERMT2
SGCB
HLA-G
EXOSC9
CLASP2
BOD1
IL15
FLT4
MOCS2
NDST3
SUPT3H
EEF1E1
ENPP3
SRP9
PDE4DIP
SARS1
MED23
KRTAP2-4
KRTAP2-3
RPE
KRTAP2-2
METTL15
KIF18A
SRSF11
MINPP1
PTGFR
CCDC185
GPR89B
SCLT1
C4orf33
MAST4
H2BC17
H2AC17
SRBD1
H3C12
GMFB
SNRPB2
REXO2
RAB4A
CRY2
KIF5B
PKIG
SERINC3
BMS1
CEP120
FAM91A1
PRKCI
ACBD6
TOMM34
STK4
ECI2
CEP135
CCDC30
TCAIM
TCERG1
C6orf226
TTC17
CENPC
NAA30
ZSCAN9
FZD6
TDP2
ACOT13
GPSM2
STAMBP
TMF1
OPN3
CHML
TOMM20L
SNRPF
UQCRFS1
TECPR2
CINP
PPFIA4
OAZ2
MYO1B
MRPL42
CLK4
FARSB
EDEM2
PHLDA1
DNAJC19
RDH5
BNIP3L
BLOC1S1
AP3B1
P3H2
ITGA7
STX17
KCTD8
DEPDC1
DEF6
DPY19L3
NOL10
NOXRED1
ZCCHC4
SYCP2
FAM217B
L2HGDH
DMAC2L
RNLS
LIPJ
C10orf88
MITF
SDHAF4
RPP21
ZPR1
APOA5
PPP1R3D
AKIRIN1
CSNK2A1
POFUT1
PLAGL2
ANTXR2
TEFM
FIP1L1
CC2D2B
CHMP2B
BCL10
MYLIP
RAD54L
TMEM154
LRRC37A3
CCDC86
NDUFAF2
ERCC8
PARVA
KCNN2
DST
LEMD2
SUCO
CSRP2
MAP2K5
SIPA1L1
PACRGL
ELAPOR2
MAPK8
MAPK1IP1L
SC5D
MTBP
MRPL13
MKRN2OS
C18orf21
MKRN2
RCBTB2
PIP4P2
BBS12
SUCLG2
CCNH
ZNF691
ZC3H13
ADGB
INO80C
PAG1
AMACR
PDCD6IP
CDKL1
CFAP58
VPS54
IFT57
CEP295
GCH1
UQCRB
SLC25A46
VAMP3
SYBU
STN1
H4C9
H2BC11
H2AC11
SEL1L
MOCS3
DPM1
VPS8
CDCA7L
MFSD2A
B4GALT5
PABPC4L
DCAF8
FAM151B
RFX3
TMTC3
CEP290
SLC25A27
CYP39A1
USP17L21
USP17L20
USP17L12
ZNF35
MRPL2
KLC4
CUL7
USP17L22
PAQR8
IQSEC3
TBC1D5
EIF2S1
ATP6V1D
HTATIP2
OGFRL1
MTOR
AMZ2
SPATA3
KRTAP9-9
RNF180
DCUN1D5
CD302
KRTAP9-3
KRTAP9-2
DPH6
FOCAD
TCP11
STX18
CRY1
LRRC6
TMEM14A
NCEH1
MMS22L
MCUR1
ZSCAN23
SS18
TFAM
NCSTN
COPA
GXYLT2
FAM174A
FIGN
EXPH5
DUSP15
THAP6
LNPEP
CLDN1
DCK
RAB33B
CUL1
TESK2
MMACHC
CCDC163
CHD6
TNFAIP8
E2F6
PPP1R11
USP49
RAD21
POLR1H
WDR37
BPHL
EPS15L1
OTUD6B
NUP54
SPTLC1
MED30
RALGAPB
ST7L
CAPZA1
MRE11
ANKRD49
PRPF38B
ZNF829
ZNF568
IDI1
KHDC1
UNC13B
MSANTD4
TOP1
RPP14
HTD2
FOXO3B
DISP1
ANKS1B
ERMAP
RAB28
C6orf118
DYNC2H1
EFR3A
FAM102B
SVBP
MED10
LCORL
SCARB1
ANGEL1
APPL2
GOLGA5
DDHD1
RNASE4
ANG
MAL2
DEK
LZTFL1
NDUFV2
ALKBH3
TICAM2
NEK11
ZFPM2
HMGCLL1
CRBN
NFRKB
ASTE1
THOC3
PIN4
LRP12
INPP4B
NCOA5
PHF3
TTLL7
TMEM263
MMAA
BTBD9
PLPP1
NAP1L1
TMED8
SAMD15
PLRG1
PRMT6
POMP
HMGB1
PSMG2
E2F7
USPL1
VRK2
CEP76
UHRF1BP1
UTS2B
CCDC50
CCNG1
ANTXR1
SMAP2
SH3GLB1
TRMT5
SLC38A6
SPATC1
SLC25A4
SEC13
RASAL2
ZBTB18
PELI1
OAZ3
MRPL9
CXCL2
USP6NL
PNPLA8
MAEL
ILDR2
KAT7
ZKSCAN8
PTS
PELI2
LOC100287896
LIPT2
RBM12
CPNE1
TMEM45A
TMEM74
ALMS1
GABRB3
PHTF1
PAFAH2
VCPKMT
ARID5B
ETFDH
C4orf46
RGL1
NME7
BLZF1
NTAQ1
MYL12A
ACADM
TIGD6
HMGXB3
ALG8
PTPDC1
DNAH6
SMC5
PPP1R42
MYL12B
ARG2
GNG12
ITPR1
OXSM
NGLY1
CHMP4C
L3HYPDH
JKAMP
SPAG16
ZEB1
STPG2
MYH4
ATP10D
RFX6
KIF6
FAM3C
USP30
NREP
COX10
SVOP
DPYD
ERAP1
BTN3A1
ATAD2B
COQ2
NFYB
RIC8B
PGAP3
ERBB2
NOTCH2
ATP5F1E
NPL
VAPB
ZNF124
RPL22L1
SAMD12
TCTN2
MKLN1
CDC73
TTC4
SNRK
DR1
PIGF
CRIPT
TRIM3
TIMM10B
ARFIP2
ZNF133
RFESD
ZSCAN26
ZKSCAN4
NKAPL
IQCH
AAGAB
DUSP12
SAV1
EIF1B
H4C11
NUDCD2
HMMR
VPS37A
CNOT7
TMX1
SLC41A2
H2BC14
H2AC14
H3C10
H2BC13
H2AC13
NBN
GLO1
TTC33
IFT81
BDP1
FBXO4
LONRF2
ATP6V1C1
CFAP43
MTRNR2L8
NUP160
PPME1
C2CD3
LRRC8B
CTNNB1
PRKAR1A
ZNF491
SELENOK
ACTR8
CNPY3
LGALS3
EIF2D
USP47
MIPOL1
ASCC3
PPWD1
CENPK
ZW10
CLDN25
VPS37B
ALDH2
PPP1R21
MSMP
CSE1L
SDC4
H2BC4
H2AC6
ARL6
SH3RF2
ARPC5
ELMO2
AGBL3
GPATCH2L
UBA6
RAB35
SMIM15
SNF8
RNF2
RGP1
GBA2
JPT1
ROR1
RAD18
PRICKLE2
LRRC74A
CTSC
C12orf73
PCLO
TDG
MIA3
GNL2
CTXN2
MYEF2
MSMO1
CCDC15
SCAND1
ANKRD17
CMTR2
CCDC59
UBXN2B
UGGT2
CEP83
SMCO4
SNX7
BOD1L1
LRRFIP2
ING3
ITIH1
ANKRD50
EPM2A
CHMP3
RWDD1
NDUFAF4
KLHL32
APTX
DNAJA1
EPB41
RNF141
NEK4
MAK
EML5
NEGR1
PSMD9
HPD
KDM3A
CDK17
IKZF5
ACADSB
SEC22B
H4C1
H3C1
H1-1
ADH5
COX18
AP3S1
TMEM192
HSD17B7
SEC61G
ZNF596
UQCC2
NEK7
ALDH18A1
TIGD4
ARFIP1
SNAPIN
ZNF134
HSF2
GRAMD2B
ARHGAP19
MRFAP1L1
BLOC1S4
SLC35D1
RFX1
RRP36
MEA1
KLHDC3
TNPO1
TEX2
C1orf105
SRSF6
PLD1
PDHX
APIP
TXNDC16
GPR137C
BMP4
PEX3
ADAT2
EXOC6B
JHY
ZNF587
GEM
BIRC3
LAYN
GCLM
TP53BP2
PSMF1
ZNF165
OR1F12
ZC3H12C
RBM18
MRRF
PIGC
IL6ST
ARFGEF3
EBPL
PPP1R2
SOX4
RUNX1T1
FOXN3
RGS2
NUP93
KIAA0319
ARMC4
CPEB4
SREK1
SPATA1
GNG5
ZCWPW2
AZI2
RBKS
BABAM2
XKR9
LACTB2
PIGL
NCOR1
SAMHD1
TEAD1
TRDMT1
SCOC
CLOCK
OSCP1
SETMAR
API5
CDCA4
SCGB1C1
ODF3
CFL2
BTF3
TDP1
EFCAB11