ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8026055 | hESC WIBR3
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◣ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

DUX4
CDX2
REST
SOX6
GLRA1
ARHGEF38
NTRK2
FRG2C
SMARCA2
URM1
PLAGL1
GBX2
TMPRSS11E
SOCS3
RPH3A
NES
MTF2
APBA2
DPPA5
SACS
ZNF436
GIMAP5
SPRED2
SMAD7
SOX2
FIGNL2
AGO1
BCL2L1
FAM227A
CBY1
CADPS
GOLGA6D
DMXL1
PIPOX
NAV2
NR5A2
ATP1A4
ATF4
MIEF1
TCF7L1
BCOR
TARS1
LRRN3
MUC4
CACHD1
ATP8A2
CD82
CER1
PPP1R16B
FOXA2
CD99L2
SCN5A
SMIM32
FAM174B
METTL11B
PHC2
DNMT3B
GAST
OBI1
LRRN1
ZNF775
FZD5
CNPY1
PIM2
ZEB2
SRRM4
BDH1
FLNA
EMD
TERF1
MTM1
SERINC5
LRRC10B
FRG2
LMCD1
STRA6
CCBE1
PPBP
PF4
RNASE6
EDDM3B
FGD3
MUC1
AIFM1
DNMBP
TNC
RMND5B
DNTT
ZBTB8OS
RBBP4
PHC1
GNAI1
SFRP2
MTRNR2L8
FBXW11
FAM222B
PCNX2
CARHSP1
NFE2L3
KNDC1
ART1
RPGRIP1
C9orf85
ABHD17B
PAK1
USP44
PGAP3
ERBB2
LIMCH1
ID1
ACSL1
KDM2B
ZNF674
CCDC169-SOHLH2
CCDC169
TAF4B
SOX21
LHPP
LIN28B
ASXL3
TRIB2
RIPK1
ANKRD10
COMMD7
ZNF483
ITPRIP
SP5
SHCBP1L
MTHFD1L
TMEM63A
LEFTY1
LLGL1
SLTM
OR5AR1
RPL17-C18orf32
RPL17
COL23A1
CEP41
SHISA5
TREX1
KLHL4
CLDN9
CLDN6
PLPP2
RNF213
ANKRD1
TRIM24
TGIF2-RAB5IF
TGIF2
ECE1
KIAA0895
TTYH1
CLCF1
FAM126A
RAX
SLC36A2
SLC7A5
KLF6
NLRP12
BTG2
CITED2
ZNF608
DDX46
PRSS48
RARG
ITGB7
HESX1
MRPL20
TCF20
BFSP1
DHX32
LEFTY2
ZFHX3
ID3
SOX13
BOD1L1
TLL2
HABP2
HOXB1
PPP1R16A
FOXH1
GXYLT2
RFX4
SULT1C4
ESRP1
FBP1
WDFY1
NUAK2
POU2F3
FRAT2
EPHB3
SSB
IER5L
FZD8
STN1
PPME1
C2CD3
ARHGAP10
NFE2
LOC102724770
DGCR6
FGFR2
RCN1
LRMDA
TENT5B
PRICKLE1
POU5F1
SOX14
PTBP2
UBQLN4
LAMTOR2
SAMD5
MDN1
FAM222A
DUSP6
SGMS2
L1TD1
GAD2
CRH
SLC6A8
PNCK
NANOG
TNNI3K
GLYATL1B
CBFA2T2
KLHL7
LIX1
STON1-GTF2A1L
GSX2
FGF2
PBX2
GPSM3
FOXP4
CYP2S1
TRIML2
ARHGEF4
PTPN12
FOXB1
OR5K3
SASH1
ROR1
NRG1
NEUROG3
AKIRIN1
FGF1
GSN
NDUFS5
FGF13
PRDM14
GLIPR2
NRCAM
PRKG1
MT1HL1
SLN
SAMHD1
TALDO1
LIN28A
BUB1
HDAC9
PDE1B
WNT2B
PILRA
RNASET2
PTMA
AHCYL2
ESX1
VENTX
UTF1
IFRD1
LIPK
FZD2
LFNG
SEPTIN9
PES1
TCN2
DDX17
TRAPPC8
KDR
KCNJ1
BRINP2
ASTN1
GSPT2
GAS1
ETS1
GNAI2
SDCBP
EPHA4
PRKCA
SLC45A3
DMTN
FGF17
SALL4
WBP1L
ENSA
MAD2L2
DRAXIN
MORF4L2
TEAD1
RNF220
GCSAM
GADD45G
SCGB3A2
HOPX
RGS3
CRYAA2
CRYAA
DOK7
MYSM1
MFHAS1
FOXD1
NDST1
FAM24B
SMAD3
ALPL
ZCCHC12
RBFOX2
SPO11
XPNPEP2
SNRPN
WFDC8
SNURF
DENR
USP7
ADA2
MBNL3
CST1
ERMN
WDR36
SELPLG
SGK1
DPPA4
GLI2
APOBEC3F
BBC3
SET
ZFP36L2
LRRTM3
OLFML3
FLVCR1
SPATA45
TUBB2A
PHF3
USP17L13
USP17L17
USP17L15
TEKT3
DHDDS
LARP1B
AEBP2
KCNMB4
ACCS
MFSD4B
ZSWIM3
ACOT8
LZTS1
LCA5
EEF1A1
DGAT2L6
ADAMTS1
PTGS1
ETV4
PHLPP2
DPH6
PIGH
DTX2
GUCY2F
PREP
SALL3
CDH18
SRCIN1
BEND3
ARSD
FZD10
RABL2B
PSMG3
WEE1
ISOC2
CSAD
ZNF740
GJA1
DCLK1
DLX6
ZNF438
ARID3B
SHANK2
PPP1R18
NRM
SORBS1
FGD4
TACC2
PLA2R1
LEMD2
TMEM132B
LEPROT
LEPR
EFTUD2
CCDC103
DAGLB
CA6
MUC3A
SFRP1
RHBDD2
NEDD9
TRPM3
FZR1
FAM180A
HSD17B4
NADK
SH3GL1
CHAF1A
HSCB
CHEK2
DUSP12
WASF1
CDC40
CEP131
TIAM1
ANK3
LOC150051
SLC4A2
CDK5
ASIC3
GPR149
SLFN12
PKNOX2
COBL
TEX37
MACROH2A1
RTN4
PHRF1
MAP6
TRIT1
NTN1
NEUROG1
FAT1
SCARB1
TFAP2A
ARMC12
TIMP4
KDM3A
PARN
BFAR
ST18
NECTIN1
PRND
IL17RD
KIAA2012
GOLGA6A
AMN1
OR6A2
SALL2
CHFR
C1orf100
PDPN
AGK
C6orf132
RASGRF2
CD24
MYCL
KBTBD8
RSPO1
RNF24
PMEPA1
PHETA2
NAGA
TCF7L2
ARSL
SYNPO2
FASN
FEZF2
PODXL
AFF1
RIF1
GABRB3
USP17L21
USP17L20
USP17L12
USP17L22
PDCL
USP17L18
USP17L11
USP17L10
PSMD9
HPD
SMN2
SMN1
ST6GAL1
PAK3
ANK2
DUSP1
ETV1
EBF2
ACVR1
PCDH8
CHI3L1
MYBPH
SLC2A14
PIN4
PARP16
ZBTB38
HOXD11
HOXD13
HOXD12
TBC1D16
NDUFV1
TMEM43
CHCHD4
FRY
IGFL3
WDR49
TSPAN14
IL34
AASDH
BAHCC1
RPRM
MRS2
DGLUCY
ZNF572
CTPS2
SERPINA1
LYPD1
SLC5A9
TLE1
PIK3R3
PALM2AKAP2
TRIM71
RASL12
KBTBD13
CRYBA1
FZD7
CRX
NRARP
MAMDC2
NDUFB5
MRPL47
HMGB1
ZSCAN2
COL17A1
MTRNR2L1
GDF11
ITGB8
TDGF1
KIF21A
MED25
FUZ
LRRC2
SMCO1
SHC1
FLAD1
CKS1B
GRK6
NOTCH1
UGT1A6
ARID2
KRT31
SMPD1
MED12
IL2RG
TRIM2
CELF3
RIIAD1
ZNF398
DDX43
VCAN
ITPRID1
GOLGA6B
KIF5C
NAA50
ATP6V1A
ZNF343
NCDN
KIAA0319L
CYP1A1
LDB2
PHF5A
ACO2
ZYG11A
RPS24
ZNF18
TMEM70
CELF4
GPRC5B
C1orf127
ICMT
HES3
FAM120B
CDC14B
LY96
MTRNR2L2
MSH3
DHFR
KMT2B
IQCH
AAGAB
SYBU
ZCCHC3
C20orf96
GOLGA6C
TESK2
PARP1
CYTH2
PUF60
MKRN1
ZBTB40
GCNT2
MCCC1
FOXP1
SOX5
TMCC1
PER2
FBXL19
LINGO1
SLA2
CDC42EP3
KIFBP
MMACHC
CCDC163
DLL1
NFE2L1
SIPA1L2
TRIP4
PCLAF
SGPP2
FBXO40
PYGB
HGS
ARL16
WDR55
DND1
RASA1
ZFC3H1
THAP2
SNAPC3
CREB5
GSAP
SLC35A5
CRYGB
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
CCT2
H3C15
H3C14
SPRY4
ATG10
ARAP3
ITGB3
SCAF4
MBNL2
DDR1
ITGB5
PRR15
THOC3
APOBEC3D
APOBEC3C
VOPP1
CAPRIN1
TNRC18
LOC100129484
TUBB
MDC1
DCAF4L1
PREX2
SLC30A9
SPIC
ECT2
EOMES
TOMM40
MID1
SYT2
POSTN
VWCE
UNC13B
ALDH1A2
DUSP29
UQCRHL
SH3BP4
TMC5
TGIF1
MLEC
PCBP1
CDYL
LMNA
EAPP
AASS
CPA2
HMOX1
BICD1
SEMA6D
TPH2
ONECUT2
KCNN2
GDF3
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
PPP1R2
LIMK2
TES
WDFY2
SMYD2
LRRTM4
ARIH1
SIN3A
NRROS
PSORS1C2
NEBL
FGF12
CNN3
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
MOG
ZBTB45
SRSF7
PGPEP1
KLF5
ATXN3
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
ZNF781
IFT80
DDX3X
KIF6
ZNF304
CHN2
PSME3IP1
CUEDC1
DST
TMEM167B
CCDC130
PEAK1
HMG20A
SLC39A8
PALLD
SENP2
TPST2
SLC46A1
ABO
ANKRD6
KLHL6
RASAL2
PYCR2
SYN3
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
PGK1
DSP
SPIN1
SLC20A2
CACNA2D1
PXMP4
ERG
CAMTA1
PLEKHG1
LYPD6B
SINHCAF
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
GTF2I
ADAR
MAST1
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
AKIRIN2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
CCDC200
ANKRD35
CAPN3
PITPNM2
OAZ2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
LRFN5
GCNT1
ABCB5
CHD6
UFD1
CDC45
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
FYN
FOXI3
TMEM47
DACT1
ZNF536
RTBDN
PACSIN2
PDIA4
NUAK1
C1QTNF7
HES1
APELA
ZNF296
GEMIN7
CCN2
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
ZIC4
CSK
SIX2
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ADGRL2
ZNF195
REV3L
ESR2
TAF13
CFLAR
TMUB2
URGCP
FUS
INSM1
RARB
TRMT10C
PADI2
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
TCF4
TRIM28
OSBPL1A
ERVH48-1
ANXA2
ST3GAL6
EYA1
DIDO1
ATXN7
FAM219A
DNAI1
FAM107A
CCN3
CXADR
SLC33A1
HHIP
ETV6
MARCKS
TSPAN13
FOXO6
CCL26
CERCAM
GID8
MVB12A
ZBTB18
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
NDUFAB1
CLPB
SMIM14
PRKAG2
INTS9
HMBOX1
KANSL1L
SLC25A36
TUT1
MTA2
ZNF649
KCNIP4
MSANTD4
ZNF565
NPSR1
SYNDIG1
SDK1
RAB15
TCP1
MRPL18
LBP
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PDK1
NMNAT2
BCL9
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
FAM227B
DISP3
TNS3
PRTG
URGCP-MRPS24
SLC23A2
TFE3
TET3
STOX2
MAGEB2
CDH10
DICER1
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2
PSEN2
TJAP1
MBD4
IFT122
AFAP1
MTHFD1
MMP10
UHRF1BP1L
LRAT
NUP160
SLC2A8
COL4A2-AS2
BST2
KRTAP3-2
RASSF8
NBPF20