ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX512370 | iPS cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◣ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NR5A2
NES
SMAD7
CDX2
TARS1
BCOR
SOX6
FGF1
PIPOX
MTF2
PPBP
PF4
PIM2
SMARCA2
SACS
SPRED2
MUC1
SOX21
NAV2
ANKRD1
SRRM4
GDF11
CD99L2
TERF1
APOBEC3F
SOX2
LZTS1
DNMBP
LFNG
FLVCR1
SPATA45
LRRN3
GAST
GLYATL1B
NFE2L3
LDB2
EYA1
CD82
VENTX
UTF1
DUSP6
IER5L
NRARP
SGK1
NTRK2
APOBEC3D
APOBEC3C
TEKT3
ARHGEF38
ID3
TGIF2-RAB5IF
TGIF2
ETS1
NDUFB5
MRPL47
CREB5
ZNF532
PLAGL1
RMND5B
NANOG
SLC36A2
BDH1
CLDN9
CLDN6
CADPS
HMGB1
OBI1
FAM227A
CBY1
PRICKLE1
GOLGA6D
NFE2L1
SHC1
FLAD1
CKS1B
TFE3
MRPL20
REST
SLTM
FBXO40
CARHSP1
AHCYL2
MUC4
POU5F1
GOLGA6A
FBP1
RPGRIP1
FOXD1
TENT5B
NADK
ITPRID1
KDR
RPH3A
GLI2
DPPA5
GSAP
GSX2
CBFA2T2
RAB17
ATG10
KCNJ1
KIFBP
GNAI2
TMPRSS11E
CAPZB
ZFHX3
PSMD9
HPD
NAA50
ATP6V1A
GPRC5B
SSB
SAMHD1
POU3F4
METTL11B
CNMD
LRRC10B
CACHD1
TCF7L1
RNF220
RIPK1
SNRPN
PRSS48
DDX17
COMMD7
PSMG3
NCDN
KIAA0319L
URM1
BUB1
AGO1
GAS1
ZIC3
ANKRD10
CNPY1
SPIN1
SGMS2
VCAN
PRAC2
PRAC1
HOXB13
SCGB3A2
RNASE6
EDDM3B
USP44
CBX8
MRS2
NRG1
ATP1A4
ZCCHC3
C20orf96
TFAP2A
MED25
FUZ
MID1
TALDO1
CHFR
TMEM70
LY96
SULT6B1
CEBPZOS
DOK7
FAM180A
MDN1
ESX1
SIX3
SMPD1
GOLGA6C
ZNF398
PRKG1
SHCBP1L
OLFML3
POSTN
GJA1
MAD2L2
DRAXIN
ICMT
HES3
FGD4
DDX43
HESX1
SFRP2
SLC2A14
GBX2
LINGO1
NLRP12
PARP1
FOXA2
C9orf135
AFF1
CSAD
ZNF740
AASS
UBD
FOXI3
BRINP2
ASTN1
GOLGA6B
WDFY1
SEPTIN5
HDAC9
VOPP1
CITED2
RPS24
DEFB113
DEFB114
TLE1
SLC7A5
TDGF1
LRRC2
PLPP2
DMXL1
PPP2R3A
TMEM47
DCAF4L1
SLC30A9
LRRTM3
SGPP2
ATP8A2
HOXD11
HOXD13
HOXD12
GIMAP5
GET3
MBD4
IFT122
RNASET2
PHC1
OR5AR1
ETV4
PGBD5
GUCY2C
PPP1R16A
FOXH1
SHISA5
TREX1
RASGRF2
LHPP
CACNG8
ZNF608
DHDDS
LMCD1
GADD45G
SNURF
DAGLB
PDCL
DUSP29
ZNF536
MAGEB2
DIDO1
GID8
ZNF343
TUBB2A
SMN2
SMN1
EBF2
SLFN12
TNRC6A
AGK
ZNF483
DPH6
FAM120B
DLL1
OR5K3
IFRD1
ARHGAP21
TMEM30A
KIF21A
LIPK
ST18
HOXB1
LRRN1
GABRB3
SALL3
TRIM24
PDPN
PMEPA1
CACNA2D1
MYSM1
ZFC3H1
THAP2
RARG
ITGB7
IRAK1BP1
PHLPP2
PHETA2
NAGA
SMYD2
LRRTM4
DDX46
TMEM63A
LEFTY1
SMC6
GEN1
SOCS3
BTG2
OBSL1
INHA
PTMA
OR5F1
HSCB
CHEK2
RFX4
FAM222B
TMEM170A
ALDH1A2
ZXDC
AASDH
AJAP1
ARF6
FRAT2
ADGRL2
RNASE9
SMIM14
STN1
SUCO
C9orf85
ABHD17B
SRMS
FNDC11
PARN
BFAR
ARHGAP42
PRPS1
SLC35A5
SORBS2
ATG3
ZBTB8OS
RBBP4
GAD2
GNAI1
TIMP4
CLEC5A
TRIML2
DDX3X
KIAA0895
PLA2R1
CYP2S1
RASA1
PITX2
WDHD1
SOCS4
SEPTIN9
ATXN3
CCDC169-SOHLH2
CCDC169
SCAF4
FBXL19
FGF2
GPM6B
LHX2
XK
ZSCAN2
ITGB8
GRK6
SERPINA1
L1TD1
USP7
FAR2
RIC8B
APBA2
NOTCH1
WDR49
ZNF75D
ETDC
TMEM132B
MOG
GPR85
ZNF202
PYGM
ZNF781
SMAD3
PILRA
CER1
COL17A1
FIGNL2
UGT1A4
UGT1A3
PXMP4
LEPROT
LEPR
ZBTB40
AEBP2
PLEKHG5
OLFML2A
NR6A1
OSTM1
FGFR2
SOX5
TLCD1
RPL23A
RAB34
PROCA1
CDH10
P2RY12
CHMP7
FHL1
ZNF484
SIN3A
PACSIN2
PALLD
ZNF428
SRRM5
EXOC7
WNT5B
MTHFD1L
CLPB
ESRP1
BUB1B
MAPK1IP1L
MFSD4B
DUSP8
ONECUT2
KCNA4
GNPTAB
SERINC5
GCNT2
PBX2
GPSM3
PCBP1
KNDC1
TOMM40
ATF4
MIEF1
CHD6
DLX5
FAM174B
TEAD1
ZSWIM3
ACOT8
PTBP2
CRLF2
BCL2L1
HOPX
ZNF304
HOXD1
FOXP4
RTP4
CLEC6A
CCBE1
CSNK1E
MFHAS1
HES5
PANK4
KDELR1
GRIN2D
SHANK2
CRH
SLC46A1
FZD8
FOXB1
NXPH1
TUBB
MDC1
PHF5A
ACO2
LBP
ATP6V1G1
SOX14
KCNN2
GLIPR2
ARAP3
SLAMF1
CDH18
MECOM
HMOX1
PROX2
HGS
ARL16
TRIM13
TREM2
LIN28B
SFXN1
CAV3
CDKL5
KCNMB4
CAPZA2
CCDC27
ZFP3
TCAF1
KLRC1
FRMD4B
HEY2
RBPMS2
CD200
RTN4
IL34
NDUFV1
TESK2
MMACHC
CCDC163
TJP2
FAM153B
PPP1R3B
DMRT1
CSF2RB
G6PC2
CELSR3
ZAP70
KLHL7
GPR31
FBXW11
CEBPZ
RHOBTB2
ID1
FAM20A
TRAPPC8
TCF7L2
ZNF677
VN1R2
PLPP3
POLL
DPCD
STON1-GTF2A1L
KDM2B
PCNX2
APELA
GRHL2
MBNL2
MUC3A
GALNT3
RAX
IQCH
AAGAB
NXPH2
FUBP1
DNAJB4
RPSA
DNTT
IFNE
EBF3
VAX2
ARID2
PALM2AKAP2
KXD1
CHCHD3
IGFL3
CHRNA1
PDHA2
RGS3
SYN3
FZD5
ZNF875
MAST1
RTBDN
PDZK1IP1
FERMT1
KRT13
PTAR1
SNAPC3
TPST2
GRID2
BICD1
SLC10A2
DUX4
GTF2I
EPHB3
LITAF
FZR1
TP53
WRAP53
EPB41L1
ANKRD40
LUC7L3
SLC39A8
DUSP12
ARSD
TBC1D1
LAPTM4B
GFPT2
HECW1
TRIM2
SOAT1
ACSL6
PRDM14
MACROH2A1
CAPN3
PRICKLE2
MED12
IL2RG
TOX
CSRP2
CCDC88C
TRIB2
NMNAT3
NBPF15
SLC25A36
RBP3
AKR1D1
MYH15
TBC1D16
GHRH
A2ML1
KAZN
ARHGEF19
ZNF565
ARF4
KCNMB2
FGD3
HBG2
HBG1
NBPF20
DDX59
ENSA
PTCH1
CD24
CERCAM
TSGA10IP
GCSAM
MCF2L2
PI4K2A
ETS2
CANX
MTRNR2L1
TIAL1
GABRQ
CST1
C1R
FUS
TUT1
MTA2
MSC
GDF3
GSPT2
COBL
ARID5A
MTRNR2L8
CDKN1A
ZSCAN10
TMUB2
TRMT10C
ATXN7
THOC7
TAL1
HIP1
TSNAXIP1
RANBP10
FYN
SRPK1
MKRN1
ZNF101
ATP13A1
SUPT20HL1
ARID3B
CCDC85A
HSD17B4
CELF4
ZNF296
GEMIN7
ESR1
ASMTL
IL1RAPL1
ZNF34
ZNF517
RPL8
PSORS1C2
NOXRED1
SLC66A2
HSBP1L1
MAPK8IP3
STOX2
NFE2
ACADM
SMIM5
SMIM6
LONRF3
BARHL1
NCOA7
MAP3K3
SAMD5
TRIM38
DCAF4L2
ZEB2
FAT1
TFAP2B
HSPA13
VMO1
PSMB6
GLTPD2
ENOX2
GLB1L3
FAM200B
SCN5A
EXOC5
AP5M1
DHX32
FAM227B
LRAT
WDR44
FABP6
PSIP1
LRRC47
BBC3
CELF3
RIIAD1
MTM1
USP53
PAK3
UBQLN4
LAMTOR2
ZSCAN9
MEIS2
INO80C
TRMT2A
RANBP1
CTPS2
SALL4
NBPF12
ISL1
PUF60
NRBP2
C5orf60
TMEM87A
GANC
SLC38A3
MSI2
FILIP1L
GOLGB1
VIM
C7orf57
ASPA
SUN3
GARS1
SMCO1
ZNF674
PDGFA
CTBS
SRSF7
FTCDNL1
BTBD10
ZNF600
HLA-A
MAMDC2
NEPRO
PRUNE2
THEM4
SMIM32
SCD5
KMT2B
RAB30
ZC3H12B
BEND3
NFIB
ZNF121
CYP2B6
LRGUK
F11
FAM151B
BCL2L14
UBOX5
FASTKD5
NUDT4B
TTYH1
SLC16A13
SLC16A11
LIMCH1
CCDC9
PRODH
LOC102724788
CAPRIN1
NRROS
PEAK1
HMG20A
OR13A1
KCNMB1
RIPK4
AMN1
PCDHB5
ADAMTS16
LRRC20
PRDM16
TMC5
NOSTRIN
CFAP298-TCP10L
CFAP298
RHEX
CDX4
EIF1AX
TC2N
PTPRN
GID4
ATPAF2
PROCR
CLTCL1
ANK2
BORCS6
ARHGEF10L
CYTH2
C10orf95
MFSD13A
ST3GAL6
ZNF814
ZDHHC1
PPP2R2B
FHIT
HS6ST1
ZNF649
PLAAT4
MLN
TRIM71
CTSF
NTN1
ST6GAL1
CCDC124
OR6C76
ROR1
SDK1
FADS3
QSER1
PANX1
CAPN1
SLC24A2
GSG1
FAM236B
FAM236A
RIF1
SPIC
LAMTOR1
ANAPC15
ZNF77
PPP1R16B
ABCB5
SFPQ
PHOX2B
CYP1A1
EOMES
TRAK2
STRADB
ALPP
ZNF138
ZNF518B
UQCRC1
ARHGEF6
GPATCH8
COL12A1
JPT1
SRCIN1
PGAP3
ERBB2
ENKUR
PTPN2
UAP1L1
SAPCD2
MEIS3
CDH11
CDC14B
SPRY4
NKX1-2
NPAS3
UGP2
HABP2
RBFOX2
GRIK4
WFDC1
SNX19
PDIA4
ETV6
FEM1A
LPCAT1
TTC13
IP6K2
EPHB6
PREX2
SKIDA1
CARS1
SLC33A1
NDUFAB1
VPS37B
CFAP20
DACT3
FAM110D
DNMT3B
C1orf127
ERMN
MTHFD1
FOXN3
RAPGEF1
CGNL1
STK32C
LRRC27
CDK17
TNFRSF11A
GNA12
SLC6A8
PNCK
BHLHE22
TAFA1
PRKAG2
SACM1L
PPAT
JMJD1C
IL22RA2
PAICS
NR2F2
NRXN1
EXOSC9
GUCA1A
RPA2
MTMR9
EXT1
PAN2
IL23A
CLCF1
TOP2A
FAM24B
LANCL3
APC2
TRPC4AP
EPHA4
ZNF436
HOXA1
FOXP1
GADD45A
MLLT10
JADE1
HECTD4
MSANTD4
SREBF2
DPYSL3
RNGTT
ARID1B
CDH9
AIG1
PIN4
MSANTD1
INO80D
CDK6
FXYD7
ZBTB39
STRA6
KLF3
GLDC
SASH1
ANKRD6
ZNF770
RPL24
TBL1XR1
E2F7
TOX3
TEAD4
PBX1
BMP2
FOXO1
ADAMTS1
CACNB2
LCA5
ZBTB45
TRIM28
RNF31
PSME2
EMC9
LEKR1
PSME1
SDHD
TKT
ARSL
KLRB1
ZIC4
OPN5
AKIRIN1
ZIC1
BMPER
SIPA1L2
CCAR2
C8orf58
HNRNPA3
SLC24A3
ACVR1
KIF3C
NKX2-8
GMCL2
SLC3A2
SVOPL
COL6A1
SCRG1
PPP1R2
GCNT1
NOL3
KIAA0895L
EXOC3L1
E2F4
ADGRG7
CDX1
CPA2
MT1HL1
ZIC2
CLEC2L
LMX1A
LCP2
CPB1
SPRED1
LEF1
CDIP1
CEP41
DPPA2
SP8
ARIH1
RTL8C
TEX101
S100A11