ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX968909 | iPSC derived neural cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◣ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

PGK1
BFSP1
SOX21
UNCX
DUX4
OSBPL1A
NFASC
NR4A3
CAMTA1
PLAGL1
ITPRIP
NRARP
MTF2
FOXB1
GXYLT2
IGFBP2
LOC102724770
DGCR6
ITPK1
NKX2-2
SOCS3
FAM181A
SACS
ALDH2
LRTM1
TMEM167B
TAF13
FAM222A
DICER1
NES
ART1
DNMBP
PARP16
PRDM12
EAPP
ADAMTS18
UQCRHL
PIK3C2A
HDAC9
CSPG5
TRDMT1
CRABP1
WDR74
STX5
RGS3
CP
MSI1
S100B
TMEM107
FAM227A
CBY1
KLHL7
GAS1
CLEC19A
CHN2
PRTG
CFAP221
CRB2
SLC28A1
MEF2A
NEDD9
NWD1
LIX1L
TNRC18
LOC100129484
DTX4
CERCAM
PREP
OSBPL2
ENPP3
IQCH
AAGAB
TTYH1
NKX2-8
ATP8B1
TCIM
MUC1
ADAMTSL1
SCN5A
DDX3X
METTL11B
ME3
DDX17
C1orf127
UGT1A1
MROH2A
PHYHIPL
ID2
PHLPP2
TP53INP1
LCOR
DAB1
OMA1
PBX2
GPSM3
NID1
HMGB1
AGO1
PGPEP1
PIMREG
AIPL1
CD300LD
C17orf77
CRYAA2
CRYAA
MS4A4A
SPEM3
SPEM2
SPEM1
DNMT3B
TMEM88B
VWA1
ATP1A4
NSD2
LETM1
MED25
FUZ
C1orf198
GBX2
LMNA
MEX3A
GPC4
NRCAM
FAM102A
RBFOX1
FGFR3
NR2E1
FAM107A
ICMT
HES3
PPP1R16B
NEUROG1
TAF12
SIRT4
POLDIP3
ADAMTS14
GAST
LTF
GADD45G
PLEKHB1
FBLN1
NSA2
GFM2
TPST2
DTNA
PACSIN3
TMEM132B
SPHK2
CHD1
DBP
RUNX1T1
PALMD
MUC20
ZNF608
RBP1
PFKM
CNTFR
SRRM4
STON1-GTF2A1L
OGA
VMAC
NDUFA11
CAPS
PAFAH2
SSUH2
E2F6
SCARB1
TCP11
ABCB4
FSIP1
MBNL3
NGB
MPP1
NNMT
SERINC5
CRYBG2
LFNG
EMID1
FAM219A
DNAI1
ARHGEF4
ZNF775
LRMDA
PPP2R2B
NOTCH1
ERLIN2
SOX2
NUAK2
ZBTB18
PHRF1
TET3
TMPRSS9
IL36A
LIN28B
PAX3
WDR64
ERICH6B
SERPINA1
AHNAK
ADGRL2
SMAD2
DCT
ABAT
C1QTNF2
PTMA
RFX4
CCDC200
ZIC4
ZIC1
GOSR2
TTR
LRRN1
CAPRIN1
ANKRD6
MYCL
CRYBA1
DBX1
OR6C3
DDX5
PTPN6
C12orf57
XKR6
WBP1L
AQP2
MOB1B
CDH2
AQP5
PRR5L
RCOR1
ADAR
MEGF10
MAMDC2
DHX9
DERL1
SENP8
MYO9A
TRAT1
PDLIM3
TCF7L2
PLEKHG1
PTPRJ
PCDH8
DTD2
CAMK1G
KIF2C
FRG2
PALLD
DUSP6
SYTL2
WNT2B
PDE4B
CFAP20
ZNF496
LCA5
MIDEAS
C21orf62
GSX1
KLF9
BBC3
URM1
LGI1
AKAP9
TTYH2
RPL38
UGT1A6
FUT8
TTI2
LZTS1
CST2
USP44
ITIH4
WNT1
MUSTN1
GFRA1
ZFHX3
ERBB4
RAI14
SMARCA2
REST
CDX2
TMPRSS11E
NAV2
NR5A2
DPPA5
SMAD7
TERF1
SOX6
PIPOX
CADPS
ARHGEF38
FRG2C
MTRNR2L8
ZNF483
ANKRD1
LRRC10B
NDUFB5
MRPL47
MUC4
ID3
ZSCAN2
CACHD1
RPGRIP1
ZBTB8OS
RBBP4
NRG1
SPRED2
NTRK2
TCF7L1
APOBEC3F
RMND5B
RIPK1
GOLGA6D
FLVCR1
PIM2
CD99L2
BDH1
COL17A1
VENTX
UTF1
SFRP2
LRRN3
TENT5B
BCOR
FAM222B
MTRNR2L1
TARS1
IFRD1
GIMAP5
FGF1
SPATA45
PPBP
PF4
SHCBP1L
GDF11
SGK1
ID1
PHC1
CD82
SSB
ITGB8
PRICKLE1
ANKRD10
LMCD1
SNRPN
MFSD4B
CLDN9
RPH3A
OBI1
CLDN6
SAMHD1
TDGF1
MTHFD1L
KIF21A
BTG2
RNASE6
ZSWIM3
ACOT8
FAM174B
OR5AR1
LRRC2
SMCO1
C9orf85
EDDM3B
POU5F1
SHC1
FLAD1
CKS1B
GAD2
GRK6
SLTM
ETS1
DMXL1
GSN
FBXW11
ABHD17B
SHISA5
PLPP2
NANOG
TREX1
TALDO1
TNNI3K
ARID2
GLYATL1B
ZNF436
KRT31
SMPD1
RNASET2
SCGB3A2
ETV1
MED12
IL2RG
TRIM2
HOXB1
HESX1
PMEPA1
KDR
CBFA2T2
CELF3
RASGRF2
SLC7A5
HSCB
CHEK2
RIIAD1
GLRA1
PPP1R16A
ZNF398
MRPL20
FGFR2
NADK
BCL2L1
FGD3
FGD4
NFE2L3
FOXH1
DDX43
HOPX
PSMD9
HPD
VCAN
ITPRID1
TRAPPC8
ETV4
GOLGA6B
KIF5C
GLI2
ENSA
WFDC8
NAA50
ATP6V1A
TUBB2A
ZNF343
NCDN
KIAA0319L
CYP1A1
LDB2
COL23A1
FZR1
GNAI2
GOLGA6A
LEFTY2
PHF5A
ACO2
RCN1
GNAI1
BUB1
SALL4
ZYG11A
LHPP
CER1
ATP8A2
RPS24
DAGLB
IER5L
ZNF18
TMEM70
CELF4
FIGNL2
TEKT3
CNPY1
GPRC5B
TRIM24
GSX2
FAM120B
CSAD
CDC14B
MYSM1
LY96
FGF2
FZD8
PRKG1
ZNF740
MTRNR2L2
MSH3
DHFR
KMT2B
FBP1
LIMCH1
IL34
SYBU
DDX46
ZCCHC3
C20orf96
GOLGA6C
TESK2
FOXP4
PTBP2
PARP1
MFHAS1
PALM2AKAP2
SNURF
APBA2
CYTH2
PUF60
MKRN1
ZBTB40
CYP2S1
GCNT2
TMEM63A
ESRP1
MCCC1
PSMG3
FOXP1
SOX5
TMCC1
ATF4
PER2
FBXL19
LINGO1
FRAT2
RIF1
SLA2
CDC42EP3
RNF220
KIFBP
LEFTY1
FOXA2
MMACHC
CCDC163
DLL1
PRDM14
MRS2
STN1
NFE2L1
SGMS2
SAMD5
AMN1
SIPA1L2
TRIP4
PCLAF
SGPP2
ZEB2
FBXO40
PYGB
HOXD11
SALL3
MACROH2A1
FZD2
CRH
HGS
ARL16
MIEF1
WDR55
DND1
RASA1
ECE1
ZFC3H1
THAP2
MDN1
NLRP12
SNAPC3
HOXD13
HOXD12
CREB5
CCDC169-SOHLH2
CCDC169
GSAP
DHDDS
LIPK
SLC35A5
CRYGB
OR5K3
LRRTM3
SORBS2
WNT5B
ATG3
P2RY12
ZNF532
JPT1
SMC6
GEN1
UGP2
PDPN
CCT2
H3C15
H3C14
SPRY4
SMAD3
PRSS48
ATG10
ARAP3
GJA1
ITGB3
CDH18
SCAF4
DNTT
KDM2B
TRIML2
MBNL2
SLC2A14
PHETA2
NAGA
DDR1
ITGB5
PRR15
THOC3
CEP41
APOBEC3D
APOBEC3C
VOPP1
MAD2L2
TUBB
MDC1
LARP1B
NDUFS5
DCAF4L1
PREX2
SOX14
SLC30A9
SPIC
ECT2
ST18
EOMES
DHX32
TOMM40
MID1
SYT2
PDCL
POSTN
VWCE
DRAXIN
UNC13B
GABRB3
SH3GL1
CHAF1A
EEF1A1
CD24
ALDH1A2
EBF2
DGLUCY
DUSP29
BEND3
DPH6
SH3BP4
COMMD7
TMC5
TGIF1
MLEC
PCBP1
CHFR
CDYL
SASH1
MORF4L2
PIN4
CA6
KNDC1
C1orf100
FAM180A
AASS
CPA2
HMOX1
BICD1
TGIF2-RAB5IF
TGIF2
SEMA6D
TPH2
CCBE1
ONECUT2
KCNN2
WEE1
GDF3
ASXL3
MTM1
ANAPC4
SEPTIN5
ZNF335
MANBAL
FAM200B
KIAA0895
PPP1R2
LIMK2
TES
WDFY2
IGFL3
SMYD2
LRRTM4
LIN28A
ARIH1
OR6A2
SIN3A
L1TD1
WDFY1
NRROS
PSORS1C2
SMIM32
CARHSP1
NEBL
SRCIN1
FGF12
TIMP4
CNN3
TRIB2
CTNNA1
GET3
LRRTM2
ZSCAN10
EXT1
FEZF2
FOXD1
GABRQ
MAST4
AK4
KDM2A
TIAM2
TMPO
OLFML3
GPR31
WDHD1
SOCS4
SULT6B1
CEBPZOS
ACVR1
MOG
ZBTB45
SRSF7
SLC36A2
RTN4
KLF5
ATXN3
GCSAM
ADA2
TRPM1
PPEF2
STK31
HBG2
HBG1
TJP2
ZNF781
IFT80
KIF6
TBC1D16
ZNF304
BOD1L1
PSME3IP1
DENR
CUEDC1
PCNX2
DST
ISOC2
CCDC130
PEAK1
HMG20A
SLC39A8
IL17RD
SENP2
UBQLN4
LAMTOR2
USP7
RBFOX2
SLC46A1
PAK1
ABO
KLHL6
RASAL2
NDST1
PYCR2
SYN3
WDR49
LRIG1
PRRC2B
VIM
KLHL3
UGT1A7
SEPTIN9
DSP
SPIN1
SLC20A2
CACNA2D1
AHCYL2
PXMP4
ERG
LYPD6B
TNC
SMN2
SMN1
SINHCAF
DOK7
CCAR2
C8orf58
PPP2R3A
C10orf95
PLSCR4
INO80D
DUSP12
ANK2
GTF2I
MAST1
PTAR1
NRBP2
UNK
TSKS
H3-3B
AP2A1
AEBP2
MFSD13A
CCDC9
PRODH
LOC102724788
PNRC1
GMCL2
KCNJ1
AKIRIN2
TACC2
PHAX
ALDH7A1
CHRNA1
GPR85
ZNF34
ANKRD35
CAPN3
STRA6
PITPNM2
OAZ2
CITED2
SLC66A2
HSBP1L1
EFNB2
SNX19
SHF
SOCS5
TBC1D14
EMSY
TTC13
KCNMB4
LRFN5
GCNT1
MT1HL1
ABCB5
CHD6
UFD1
TFAP2A
CDC45
KDM3A
H2AC19
H2AC18
SLC34A1
PFN3
TNFSF8
LEMD2
FYN
FOXI3
TMEM47
EPHB3
DACT1
NDUFV1
ZNF536
MUC3A
RTBDN
PACSIN2
PDIA4
ROR1
NUAK1
C1QTNF7
PHC2
HES1
APELA
FAM24B
ZNF296
GEMIN7
CCN2
RBM22
PSIP1
ABL2
RSPRY1
KLF7
EPB41L1
VANGL2
CSK
NECTIN1
ARID3B
SIX2
FZD5
CTBP2
KLF3
FXYD7
TPCN2
ZNF875
ZNF195
REV3L
ESR2
CFLAR
TMUB2
URGCP
FUS
TIAM1
INSM1
RARB
AASDH
TRMT10C
PADI2
KIAA2012
PDE1B
AUH
SOAT1
UBAP2
FAM98A
BTBD10
NBPF12
TCF4
TRIM28
ERVH48-1
ANXA2
ST3GAL6
EYA1
DIDO1
ATXN7
CST1
CCN3
CXADR
SLC33A1
HHIP
ETV6
MARCKS
TSPAN13
FOXO6
CCL26
GID8
MVB12A
KRT8
NBPF15
EIF4A2
GLDC
ZNF600
F11R
NDUFAB1
CLPB
SMIM14
TSPAN14
PRKAG2
INTS9
HMBOX1
KANSL1L
SLC25A36
TUT1
MTA2
ZNF649
KCNIP4
MSANTD4
ZNF565
NPSR1
SYNDIG1
ZNF674
DPPA4
AGK
SDK1
SLFN12
RAB15
ERMN
TEAD1
TCP1
MRPL18
LBP
ATP6V1G1
ZNF664-RFLNA
ZNF664
CCDC92
PDK1
NMNAT2
BCL9
SOX13
ZNF517
RPL8
TRPC4AP
SLC3A2
NAA30
PLAAT4
B3GALT5
BCAT1
PTPRB
NTN5
FAM227B
DISP3
TNS3
URGCP-MRPS24
SLC23A2
PLA2R1
TFE3
STOX2
MAGEB2
CDH10
TMEM43
CHCHD4
SHANK2
KCNA4
SH3GL3
PGBD5
TBC1D23
VPS37B
SOX4
NEUROG3
TENM4
SUCO
UAP1L1
SAPCD2
PXDC1
CNOT11
KNTC1
MUS81
CFL1
CHMP7
VASH2