ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX20532165 | hESC HUES8
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◣ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

NRARP
LOC102724770
DGCR6
EEF1A1
GOLGA6D
NR5A2
PPBP
PF4
TERF1
SOX2
CADPS
SMARCA2
DUX4
CDX2
TCF7L1
GOLGA6B
CBFA2T2
NES
SRRM4
ID3
FGF1
RMND5B
PIPOX
FRG2C
DNMBP
TARS1
OBI1
FOXA2
SMAD7
DUSP6
URM1
GOLGA6A
ARHGEF38
DPPA5
GAD2
POU5F1
SSB
ANKRD1
LFNG
HMGB1
NANOG
PRICKLE1
MUC1
APOBEC3F
ZSCAN2
FAM227A
CBY1
ZNF483
GOLGA6C
PRKG1
ETS1
AGO1
FGF2
GPRC5B
PTMA
PLAGL1
LRRN3
PHC1
SFRP2
LHPP
MTF2
RPH3A
CREB5
CDC14B
WDFY1
VENTX
UTF1
SULT6B1
CEBPZOS
RNF220
SNRPN
RPGRIP1
LRRC10B
TALDO1
CD82
TMPRSS11E
SOX6
NAV2
TENT5B
GIMAP5
FOXD1
BDH1
MUC4
CLDN9
CLDN6
SACS
BUB1
SAMHD1
SCGB3A2
SGMS2
CACHD1
NADK
NFE2L3
APOBEC3D
APOBEC3C
DDX17
ZNF532
COMMD7
NTRK2
FAM151B
RIPK1
PCBP1
KDR
RIF1
TRIML2
IER5L
PPP1R16A
FOXH1
FLVCR1
SPATA45
PRSS48
SACM1L
NCDN
KIAA0319L
PIM2
ZSWIM3
ACOT8
NLRP12
BCOR
RNASE6
EDDM3B
ZNF398
TMEM63A
LEFTY1
REST
HDAC9
SOX5
LRRN1
PLPP2
NFE2L1
CHFR
ATP1A4
ZCCHC3
C20orf96
FAM120B
DLL1
FAM174B
SLC2A14
ZNF775
SHISA5
TREX1
EYA1
ISOC2
TLE1
DPPA4
SOCS3
FAT1
WNT5B
SLTM
DDX43
MYSM1
TUBB2A
AHCYL2
TGIF2-RAB5IF
TGIF2
NDUFB5
MRPL47
FBXO40
CBX8
CYTH2
SMYD2
C9orf85
ABHD17B
BCL2L14
CAPZB
AASS
CASP12
ART1
FAM180A
DPH6
LRIG1
PGK1
NAA50
ATP6V1A
KNDC1
FRG2
GNAI2
ZFHX3
PSMG3
METTL11B
PSMD9
HPD
TRIM13
CARHSP1
MDN1
SHCBP1L
CER1
ESRP1
LDB2
GLYATL1B
SMN2
SMN1
CNPY1
POSTN
CDH10
SCAF4
GTF2I
TMEFF1
TRIM24
MRS2
BTG2
GRK6
PHETA2
NAGA
KLHL7
ENSA
TMEM70
LY96
PCNX2
DNTT
FAR2
GADD45G
ZNF536
ZNF781
GLI2
HSCB
CHEK2
PARP1
PLA2G2A
ARAP3
L1TD1
KIFBP
AEBP2
LRFN5
FGFR2
GCNT2
CNMD
ATG10
DMXL1
KIF21A
ZNF18
OR5F1
HESX1
RASGRF2
CSNK1E
CACNG8
AKIRIN2
JMJD1C
LIPK
TNRC6A
GSX2
AFF1
TFE3
SNURF
PTBP2
HGS
ARL16
HOPX
LINGO1
TAL1
MFSD4B
SGK1
FZR1
LIN28B
MBD4
IFT122
PCDHB5
AKR1D1
S100A11
SAMD5
KCNN2
A2ML1
ICMT
HES3
FBP1
ZBTB45
TRIM28
GSAP
NOTCH1
FGD4
LZTS1
DEFB113
DEFB114
ZFC3H1
THAP2
FOXN3
TKT
EOMES
SINHCAF
NRG1
CD99L2
ZNF608
GDF3
SP9
GNA12
SOX21
GLB1L3
MEIS2
SHANK2
CELF3
RIIAD1
ZNF202
ITGB5
FAM153B
MED25
FUZ
SIN3A
FAM24B
ETV4
CHRNA1
P2RY12
MEX3D
SEPTIN5
PRDM14
PDGFA
LIN28A
CHMP7
GFPT2
PHLPP2
CD24
SMCO1
KMT2B
IGFL3
OBSL1
INHA
SNAPC3
LRRTM3
MS4A4A
SEPTIN9
BEND3
AJAP1
OR5K3
DIDO1
GID8
TIAM2
ETV1
ESR1
FOXI3
SOX14
LRRTM4
E2F7
PRAC2
PRAC1
HOXB13
PMEPA1
CHCHD3
CRLF2
TES
DAGLB
GMCL2
PDCL
QSER1
PGAP3
ERBB2
EXOC7
RFX4
ADAMTS16
TCHP
LRRC47
CCDC169-SOHLH2
CCDC169
SYNDIG1
CFAP298-TCP10L
CFAP298
TUBB
MDC1
CSRP2
CELF4
INO80C
GUCY2C
KIAA0895
ZNF304
TEKT3
TRAPPC8
UGP2
TMC5
ROR1
KDELR1
GRIN2D
FOXP4
HOXD11
HOXD13
HOXD12
FADS3
RASA1
TFAP2B
TPST2
ZNF649
ZFP36L2
FAM222B
EBF2
SP8
GABRB3
TPH2
F11
MKRN1
TACC2
NEUROG3
LRGUK
PGBD5
PLPP3
TDGF1
LRRC2
USP44
FRMD4B
MAD2L2
DRAXIN
KBTBD8
SLC25A36
LITAF
SYN3
SPIN1
RAD54B
FSBP
TMPRSS11F
GJA1
FZD5
CMAS
IL34
ZIC2
ZIC5
FBXL19
UNK
H3-3B
SMPD1
PPP1R16B
HMOX1
PDE1B
ZEB2
GSTT2B
GSTT2
DDT
UBQLN4
LAMTOR2
STOX2
ADGRD1
CSAD
ZNF740
MID1
DMRT1
CDH9
MOG
HBG2
HBG1
MARCKS
CYP2S1
VCAN
ANK2
HSD17B4
FBXW11
SMC6
GEN1
TTC13
MSR1
RNASE9
CCT2
TFAP2A
BRINP1
ARHGAP42
ZFAND6
SENP2
ARSD
SALL3
KNTC1
LEFTY2
SMIM14
ZXDC
PRR15
SMIM32
PBX1
ZNF140
GET3
VASH2
TNNI3K
SLC39A8
ID1
PYDC5
IFI16
PPP2R3A
BUB1B
CTBS
FGD3
PREX2
ATOH1
GABRQ
CLCC1
FZD8
GPR31
TSKS
AP2A1
MT1HL1
RNASET2
C9orf135
MEF2C
SMAD3
DCAF4L1
SLC30A9
SIX2
CRYBB1
CRYBA4
SUCO
KCNMB1
DDX3X
ARID5A
PBX2
GPSM3
NANOGNB
CLEC4C
POU3F4
SERINC5
SLFN12
TRPM1
HMGN1
FXYD7
HSPA13
LRFN3
GID4
ATPAF2
PANX1
SEPHS1
TFAP2D
KDM2B
IL17RD
CFAP20
C1orf127
ZNF627
TENM4
ZBTB8OS
RBBP4
PER2
SLCO5A1
SKIDA1
MLLT10
C7orf57
SUN3
SLCO1A2
PHRF1
PAK1
RAB17
MLLT6
ARID2
KCNJ1
CD200
GRIN3A
SASH1
SCD5
RIPK4
SRSF7
CAPN3
AASDH
STN1
CACNA2D1
OPN5
BRINP2
ASTN1
COL6A1
RPS24
TEAD1
TRIM71
ZIC4
FERMT1
PDP1
OLFML3
TRPC4AP
CRH
ZSCAN10
CCBE1
ARIH1
SLC46A1
AFAP1
JADE1
LOC389199
SPRY4
SVOPL
ZDHHC1
UBD
FAM81B
HSD11B2
VGF
FOXP1
VSNL1
TCAF1
RPSA
OIT3
FAM98A
RNF186
TBC1D2
PILRA
KLRC1
WDHD1
SOCS4
PPAT
SLC1A3
PAICS
GMPPA
ASIC4
SERPINA11
OR5AR1
PHF5A
ACO2
TBC1D16
CNOT11
RABEP1
THY1
TESK2
MMACHC
CCDC163
ARF4
S100A16
RNF213
CAPRIN1
ONECUT2
CXADR
EP300
CHD6
SRCIN1
ESX1
NECTIN1
PDK1
NXPH1
IGDCC3
ADD2
ADA2
SALL4
ZYG11A
PDHA2
IP6K2
DEFB4B
CYP1A1
USP7
HOXB1
RRBP1
USP53
GAST
PDIA4
DISP3
BORCS6
ARHGEF19
ITPRID1
NUAK1
CEP41
RPRM
PAG1
KCNA4
CSRNP2
ZNF428
SRRM5
CCDC88C
ITM2B
RARG
NR2F2
ITGB7
ITGB1
FOXJ1
RTN4
NXPH2
IQCH
AAGAB
SOCS5
CTTNBP2NL
AHCY
CPA2
CAV3
LPCAT1
AK4
TRMT2A
RANBP1
GAS1
KLF7
LHX2
VIM
NFASC
RPL27
IFI35
MAST1
RTBDN
ESRRA
CATSPERZ
MRPL20
PDPN
INO80D
SEMA6D
DTX2
HEBP2
KLKB1
TIAL1
CYP2B6
TRAPPC3
MAP7D1
GRHL2
TRAK2
STRADB
HES6
PIN4
LBP
TSPAN5
GUCA1A
GATA3
DNMT3A
CDK17
MTMR9
ANKRD10
TRIM2
PRKAG2
MIDN
ATP5F1D
IKZF5
ACADSB
TJP2
POLR3G
MBLAC2
ATF4
MIEF1
ASMTL
ARHGEF10L
SLC16A13
SLC16A11
CPT1A
ATAD2
LMCD1
WDFY2
DPPA2
FOS
HK2
ZNF506
EGR3
PPP1R12B
UBE2T
FYN
MUC3A
ERVH48-1
ADRM1
LCA5
TSPAN14
TCF7L2
ZNF195
FAM227B
MAGEB2
SPAG4
DUSP16
SIX3
ZNF484
TBC1D17
PNKP
AKT1S1
ALS2
PLAAT4
C6orf132
ZIC3
ZAP70
ELF2
CSF2RB
ZSWIM4
TMED7-TICAM2
TMED7
KCNQ4
SFRP1
PLCH1
SYNDIG1L
UNKL
MACROH2A1
ZNF77
DAAM1
SPRR2F
IFRD1
ERG
CITED2
KLF3
GPM6B
SLC10A2
LOC100130520
CD300H
CGNL1
ISL2
PLSCR4
MSI1
FOXJ2
VOPP1
ZBTB6
RC3H2
HEY2
FAM110D
GHRH
SLX4IP
MKKS
FOXB1
CCDC9
SHC1
FLAD1
CKS1B
LIMCH1
FOXO6
RBP1
GABARAPL1
DDR1
NRROS
SLC6A8
PNCK
MUS81
CFL1
MDK
LRRC8A
KYAT1
TRIB1
SLC4A2
SLC24A3
ISL1
CDK5
ASIC3
DUSP29
TMUB2
PTX3
NPY2R
ANO1
PXDC1
EXOSC9
ZNF296
GEMIN7
CCN2
KRT8
HECW1
TICRR
DHX32
HNRNPDL
ENOPH1
POGLUT2
BIVM
CAVIN3
HRG
DDX11
TSGA10IP
TFAP2C
SET
SGPP2
LDB1
C11orf58
SLC2A4
ZNF518B
SOX13
RNF31
PSME2
EMC9
PSME1
HIP1
BCL9
ST6GAL2
FRAT2
PLCG1
MKNK2
TMEM43
CHCHD4
PRKCA
PPP1R1B
SH2D3C
IFITM1
IFITM2
PRICKLE2
AMOTL2
GJC1
IFITM5
UGT8
PALLD
OR7D2
ARF3
WNT10B
UGT2B4
PHAX
ALDH7A1
ZP2
POLB
CELSR3
GPATCH8
C1R
ZBTB37
TOMM40
STK32C
LRRC27
CACNB2
PLA2R1
THBS2
TDRP
ST3GAL6
DACT3
CD2BP2
WBP11
C12orf60
PSMB7
H2AZ2
FEM1A
SPRED2
CDH6
SUCLA2
SKIL
ST18
TMPO
EXOC5
AP5M1
ZNF184
ZNF101
ATP13A1
CKB
TRMT61A
MTRNR2L1
PIMREG
AIPL1
ZNF121
IQSEC2
USP17L21
USP17L20
USP17L12
USP17L22
AMN1
PALM2AKAP2
ST6GAL1
FZD10
EMSY
ARID3B
TUT1
MTA2
GBX2
ADNP
AGK
DPYSL3
URGCP
INSM1
URGCP-MRPS24
SFPQ
RASSF8
IGSF9
SLAMF9
FZD2
C1orf100
PSME3IP1
RSPRY1
FOXO1
SCN5A
PPEF2
WDR49
YAF2
RHOBTB2
PRODH2
DDX59
CALR3
C19orf44
KDM5B
SPATA22
TRPM3
BARHL1
ERVMER34-1
DGLUCY
PTAR1
SULF1
HNRNPUL1
GRIP2
LMX1A
CTBP2
SOX4
RAB30
FGD6
VEZT
NMNAT3
EPHA2
ZNF343
CCDC172
ARC
IFNE
TRIM38
NOSTRIN
HSPA4
KANSL1L
PWWP2A
DNM1L
PPP2R1B
GRID2
FAM167B
ZIC1
ZNF763
FSCN1
ZNF180
TC2N
RGS3
ZNF90
TMEM132A
OTX1
PHF19
HECTD4
HNRNPU
GADD45A
ZNF416
ZIK1
SPTSSB
MTRNR2L8
OAZ2
BBC3
SDCBP
C9orf62
BCL2L1
ALDH1A2
TRMT10C
AUH
ZNF664-RFLNA
ZNF664
CCDC92
RABGAP1L
YEATS2
GAL3ST4
STAG3
GPC2
PLAAT3
NELFCD