ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5716451 | Neural progenitor cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◢ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◣ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTRNR2L8
GRK6
MTRNR2L2
MSH3
DHFR
KIF5C
GET3
FOXO6
MTRNR2L1
G3BP1
EMSY
PUF60
SCRIB
DACT3
CYTH2
NUAK2
RBBP6
RASA3
UQCRHL
SLC25A11
RNF167
PFN1
GP1BA
ZNF576
IRGQ
CCT2
PRND
KIFBP
TMPRSS9
SLC25A25
NAIF1
OSBPL1A
FAM102A
ZSCAN18
HGS
ARL16
ZBTB2
SPHK2
RPL18
FAM83E
UNK
H3-3B
ETV4
TP53RK
CLP1
YPEL4
DICER1
CTPS2
RFX4
PLTP
FLYWCH1
IREB2
CTNND2
CROCC
HMGB1
REEP6
PCSK4
SPATC1L
PELI1
NGDN
TBC1D17
PNKP
AKT1S1
PIH1D1
ALDH16A1
FAM227A
CBY1
WBP11
C12orf60
TESK2
MMACHC
CCDC163
TBRG4
NRCAM
NDRG4
OSBPL2
CEP41
HEXIM2
RSPH14
RAB36
BSDC1
RRP36
MEA1
KLHDC3
NF2
TMX2
MED19
POR
CHN2
H2AZ2
ASMTL
CDK16
PRR5L
MTF2
ETV1
ZNF77
PTMA
IGFL3
CHMP7
PSMD3
DHX9
FRMPD2
HSPH1
SMARCC1
EPHB3
MEIS3
PPME1
C2CD3
TMEM167B
TAF13
PFKM
HNRNPH1
TMBIM6
LCA5
CCDC169-SOHLH2
CCDC169
YLPM1
CHD1
ZNF48
TBC1D10B
MYLPF
BTG1
TMUB2
INTS9
HMBOX1
GPC4
SDCCAG8
CEP170
SENP8
MYO9A
RTN4
HNRNPL
EGR3
TPCN1
IQCD
NUP214
DIMT1
IPO11
DCTN2
KIF5A
NRARP
PWWP2A
DYNLL1
SORT1
CACNA1S
ASCL5
TOB2
C1QTNF5
RNF26
SYNGR4
ZBTB45
TRIM28
LGI1
SHBG
FXR2
ATP2C2
DIABLO
TAX1BP3
EMC6
NRL
DCAF11
TOMM40
ELL
AP3M2
JOSD1
GTPBP1
CARM1
TRDMT1
EHD4
FZD9
SPEM3
HNRNPC
SPEM2
SPEM1
TXLNG
PIK3R3
MSI1
SUFU
ACTR1A
CDK12
MED1
ZNF286A
MBNL3
MAD2L1BP
GTPBP2
UFSP2
C4orf47
ABHD2
FAM120B
DLL1
TUT1
MTA2
TMEM139
CASP2
ZCWPW1
PPP1R35
MEPCE
LFNG
ARHGAP19
IL36A
MRPL34
DDA1
ABHD8
FGD3
AGO1
RGPD1
RGPD2
PTH2R
ZNF672
KMT5C
SAMD1
MISP3
C19orf67
FGFBP3
SENP2
CTTNBP2NL
LIX1L
SGCA
ACTR2
SPAG4
NWD1
GNAT2
AMPD2
HES5
PANK4
HACL1
BTD
SAXO1
RRAGA
PPP1R16B
ETV5
CSPG5
GAL3ST4
STAG3
GPC2
ZCCHC8
DSE
TSPYL4
OGA
ZDHHC5
RFX1
WDR81
TLCD2
DHX8
CNOT3
TCTN3
TENT5C
FAM181A
SHC1
FLAD1
CKS1B
C1orf127
FOXB1
CCAR2
C8orf58
MRPL45
HDGFL2
NSD2
LETM1
TPGS1
E2F6
LSM10
ETFB
DERL1
MOGS
WBP1
INO80B
TUBB
MDC1
PRMT5
RBM23
RPL13
ZNF775
NUBP1
SELPLG
HSPG2
SOX21
NKX2-2
TEPSIN
NDUFAF8
PODNL1
DCAF15
KPNA2
TEX50
NAA80
IFRD2
HYAL3
USP44
ZFC3H1
THAP2
AHNAK
HPCAL1
ANKRD6
PIN4
CCDC90B
DNM2
LRRN1
PRTG
PIK3C2A
TOMM40L
APOA2
SLC25A44
RFX2
FGD6
VEZT
DUSP1
HES6
ABCB4
LRRC10B
TRIM2
TP53INP1
ZSCAN20
MEX3D
CTIF
PIF1
CDC5L
CHD6
BANP
FBXO46
RNF169
DMWD
MEIOSIN
TRIM69
RPL36
MICOS13
HSD11B1L
MUC1
MSANTD4
CRISPLD1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
UVRAG
CCDC61
SPRY4
FAM219A
DNAI1
SLC33A1
POLDIP3
GNA12
NOL3
KIAA0895L
EXOC3L1
E2F4
HNF1A
NEURL4
ACAP1
JOSD2
ASPDH
NOTCH1
MOB1B
BMF
NOL4
ZSCAN2
URM1
CTBP2
PLEKHB1
ZNF140
RPS13
LYSMD3
EVI5L
CSRP2
KBTBD6
INVS
ERP44
COMT
PC
RAB5B
PMEL
CDK2
BAIAP2
PLAGL1
MPRIP
RRP9
PARP3
MYCL
SPATA13
RNF31
PSME2
EMC9
PSME1
ZNF251
UCKL1
WDFY2
LRRC23
HYAL1
ENO2
PAIP2B
SOCS3
DDX17
DDR1
TBC1D31
PRCC
SELENOF
HS2ST1
ZFYVE1
GFRA1
AQP2
SESN2
AQP5
EPRS1
WDR49
ZNF84
C12orf71
RPS23
ATP6AP1L
UNKL
CLIP1
GRHPR
KLF1
GCDH
DNASE2
SMUG1
TMEM256
PLSCR3
NLGN2
SP1
KNTC1
XPC
LSM3
NEMP1
NAB2
TMEM91
B9D2
TGFB1
FZR1
ZNF195
TCF4
CLPB
CDC25A
ATF5
NUP62
IL4I1
DOHH
PPP2R1A
KHDRBS1
RAC3
CENPX
MAMSTR
LRRC45
HDAC9
FGD4
H3C15
H3C14
H2AC19
H2AC18
CELSR3
ILF3
UBE4B
SYMPK
FOXA3
ZNF358
MCOLN1
H3C6
H2BC8
H2AC8
ZNF548
NDUFB5
MRPL47
TPST2
CCN2
ZBTB20
CRB2
SEL1L
NDUFS8
TCIRG1
HDGF
MRPL24
SHISA5
TREX1
TOX3
UGT1A1
MROH2A
ITFG2
FUT5
VPS26C
SRF
PCOLCE
MOSPD3
IFT27
DTHD1
RNF5
AGPAT1
AGER
ZNF771
HBP1
CPA4
LUC7L2
CDH2
GGPS1
ARID4B
FMC1-LUC7L2
FMC1
SLC35E2B
SIRT7
PYCR1
MAFG
VPS37B
COPZ1
GSC2
MRFAP1L1
BLOC1S4
ASPSCR1
NOTUM
UBE2S
KDM2A
MUS81
CFL1
ERGIC2
RPL27
IFI35
PDP1
TRAPPC3
MAP7D1
NDUFB8
HIF1AN
MRPL27
EME1
KIFC1
TM9SF1
HEXIM1
IPO4
NDUFA5
PPP1R2
JAG1
KHSRP
C16orf96
RBM15
WDR59
USHBP1
BABAM1
DVL2
RGS12
SPAST
PHF23
GABARAP
NSUN3
DHFR2
SRRM1
ELK1
IER5L
TAGLN3
RPUSD4
FAM118B
RFX3
TICRR
NAA40
BRCA1
SMARCAL1
LIN52
ALDH6A1
CERCAM
MPV17L2
CNIH4
RPS11
TRIOBP
RPL13A
TRMT1L
SWT1
ZNF823
EHBP1
ATF4
SFRP1
CD2BP2
RAB5C
ELP5
CTDNEP1
FAM185A
TRAF7
TOR2A
SF1
RAB26
TSPAN31
CDK4
MARCHF9
CLDN7
CDC14B
SINHCAF
ALDH2
TSNAXIP1
RANBP10
AMMECR1L
EXOSC5
BCKDHA
TUBA1A
WBP1L
E2F1
PI4K2A
NNMT
MORN4
POLRMT
PYCR3
GFUS
FGF22
ZMAT2
ADAMTS18
DPYSL5
NASP
MMRN1
HARS2
HARS1
RPL35A
IQCG
MEGF8
NFATC2IP
EPC2
LMLN
PPP1R15A
USP1
PLEKHA4
C1orf189
ADAT1
VIM
SIX2
ITGB1
CCDC146
GID4
ATPAF2
PPP6R3
SLC35B4
ZSWIM4
VEPH1
RAG2
IFTAP
BMPR1B
RND1
NBEAL1
S1PR4
NCLN
SND1
LPIN2
PIP4P1
OSGEP
APEX1
PNP
DISP3
IP6K2
DNM1L
JPT2
PHF12
KBTBD3
AASDHPPT
ZNF653
GLRA1
DGLUCY
GPATCH8
PHB2
BBS7
SMARCB1
PALMD
GHITM
C1QTNF2
RLF
ERCC6L2
RPS6KA5
PCF11
NUMB
UBXN4
SPC24
CCNT1
SPRING1
RNFT2
DPAGT1
H2AX
CDC6
CIC
HMBS
ZNF547
TRAPPC2B
BFSP1
ARIH1
SDCBP
LRP2
COX8A
CX3CL1
PCDH8
DNAH1
PRPF38A
ORC1
RPL29
TMEM109
PRPF19
CALR3
C19orf44
PRKRIP1
ING4
SORBS2
CAMTA1
BAHCC1
VGF
ID4
PITX3
GBF1
NUMA1
LRTOMT
BIK
WDR19
GNB2
PKNOX1
IFRD1
LMNA
ZBTB38
DTX4
XRCC5
ABCG1
FRAT1
DTD2
KATNB1
CAMK2D
MID1
ZNF189
MRPL50
TSPYL1
ABHD4
DAD1
GADD45A
SCOC
FOS
ZC3H10
PANK2
STRADA
ESYT1
MTCH2
KRT23
TCERG1
EMC3
MEX3B
CDK5RAP3
PDXP
TENT5B
BICRA
SIRT4
SRPRA
GOLGA5
INTS4
PTBP1
POLK
CERT1
C16orf91
SAC3D1
OCM
TRAK2
STRADB
PPP2R5B
ATG2A
SCRT1
DGAT1
ZFHX3
UBQLN4
LAMTOR2
ADAR
NXPH2
UBR2
TLE3
TCP11
MAP2
TMED7-TICAM2
TMED7
RNF225
PUS7L
IRAK4
EGF
ZNF584
PTP4A1
EEF1AKNMT
MXD1
WDR87
SIPA1L3
UBE2F
GADD45B
ACP6
SYP
PRICKLE3
MAGI1
PUM3
HSPA1B
HIBADH
RACGAP1
POLR3H
BBS12
FBXL19
CNN3
CFAP20
SRP14
RUFY3
C10orf120
STAP2
MPND
PCNX3
MAP3K11
ZNF513
MAP2K7
RAB8A
PPM1E
SNX17
PRKAG2
SDF2L1
TRAF6
RAG1
ZBTB37
SETD1A
ORAI3
EIF3L
ANKRD54
PKD2L1
SIDT2
PDE4B
ZFP36L1
CDK5RAP2
PAIP2
LMAN2L
VMP1
PTRH2
RNF10
COQ5
SPATA25
NEURL2
ZSWIM1
MTMR12
SHANK1
CLEC11A
ANK2
KANSL1L
ANKHD1-EIF4EBP3
ANKHD1
PRR7
RRBP1
RERE
FABP7
TCIM
EIF3F
SMPDL3A
DBN1
L3MBTL2
LARS1
EGLN2
MECP2
NES
RGS3
SCHIP1
TULP2
NUCB1
TTF2
RPL21
KMT5A
FANCC
MRPL2
KLC4
CUL7
TNMD
FOSB
SNRPD2
QPCTL
CRYBA1
ABAT
E4F1
PCBP2
PGP
OSBP
PDPK1
PCM1
PSMC4
RPS26
CEMP1
TPH2
ZBTB6
RC3H2
PACSIN3
ARFGAP2
NAA35
RPS5
U2SURP
PMM1
PGM1
TAB1
MORF4L2
PCYT1B
GOSR2
GPBP1
PGM2L1
KIF3C
MTRNR2L10
ALK
DDX49
COPE
CHCHD1
TMEM151B
NFKBIE
ZSWIM8
TSPAN17
PSENEN
PROSER3
LIN37
HSPB6
UBL5
FBXL12
ARMCX4
NEBL
DDX39A
LPCAT2
ERCC1
ZBTB5
BRICD5
CALCOCO1
WBP2
CENPC
EFCAB6
MLST8
RPS24
TTYH1
PTTG1IP
EFHC1
SLC4A2
SPRYD4
MIP
CDK5
ASIC3
SNX1
CIAO2A
METTL16
POLR3A
MGAM
UBL7
EFR3B
BUB3
HMX2
PDK3
CUL3
SASH1
CCAR1
HNRNPUL1
TSPAN19
LRRIQ1
TEX2
ACTN4
STAU1
DUSP7
WIPI1
MAP3K13
DDX27
PGAP2
RALGAPA2
MED25
FUZ
TBC1D23
SREBF2
ADNP
ABCA5
NR2F1
LRRTM3
PARP16
SOX13
PKIG
LRFN3
ZNF254
ZNF138
USP30
C2orf80
CHD2
CCNG1
TGDS
GPR180
PPP4R3B
SACS
TMEM132B
BORCS6
ARMC12
MRPL17
ILF2
NPR1
ERICH6B
CBX5
TRAPPC6A
BLOC1S3
GAMT
DAZAP1
HNRNPA1
GPR3
CD164L2
KBTBD7
UPF3B
ZNF417
MFN2
DUSP6
TCF7L2
ZNF57
EP300
RSF1
AAMDC
FEM1A
SDE2
CD68
EIF4A1
SZRD1
KIF27
CCNT2