ChIP-Atlas: Target genes

Potential target genes for SOX2

Query protein: SOX2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3205373 | Head and neck squamous cell carcinoma
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX2's Target genes

◢ SOX2: Average

◢ SRX130061: BJ

◢ SRX10407083: Esophageal squamous carcinoma cell line

◢ SRX10407084: Esophageal squamous carcinoma cell line

◢ SRX5286338: ES cells

◢ SRX5286339: ES cells

◢ SRX5286342: ES cells

◢ SRX5286343: ES cells

◢ SRX11904439: H29

◢ SRX11904440: H29

◢ SRX6852812: HCC2814

◢ SRX277137: HCC95

◢ SRX6852810: HCC95

◣ SRX3205373: Head and neck squamous cell carcinoma 

◢ SRX702105: hESC derived mesendodermal cells

◢ SRX702106: hESC derived mesendodermal cells

◢ SRX702108: hESC derived mesendodermal cells

◢ SRX1047416: hESC derived neural cells

◢ SRX11919277: hESC derived neuromesodermal cells

◢ SRX011616: hESC H1

◢ SRX1047413: hESC H9

◢ SRX277140: hESC H9

◢ SRX6101128: hESC H9

◢ SRX6101129: hESC H9

◢ SRX266860: hESC HUES64

◢ SRX266861: hESC HUES64

◢ SRX702107: hESC HUES64

◢ SRX702109: hESC HUES64

◢ SRX20532164: hESC HUES8

◢ SRX20532165: hESC HUES8

◢ SRX5286340: hESC WIBR2

◢ SRX5286341: hESC WIBR2

◢ SRX5286344: hESC WIBR2

◢ SRX10101684: hESC WIBR3

◢ SRX10101685: hESC WIBR3

◢ SRX8026053: hESC WIBR3

◢ SRX8026055: hESC WIBR3

◢ SRX968908: iPSC derived neural cells

◢ SRX968909: iPSC derived neural cells

◢ SRX968910: iPSC derived neural cells

◢ SRX968911: iPSC derived neural cells

◢ SRX968912: iPSC derived neural cells

◢ SRX1813586: iPS cells

◢ SRX1813587: iPS cells

◢ SRX20140858: iPS cells

◢ SRX20140859: iPS cells

◢ SRX512370: iPS cells

◢ SRX6852811: KNS-62

◢ SRX10035162: KYSE-140

◢ SRX10407085: KYSE-70

◢ SRX277131: KYSE-70

◢ SRX6852808: LK-2

◢ SRX6852813: LK-2

◢ SRX6852814: LK-2

◢ SRX026880: LN-229

◢ SRX359955: LoVo

◢ ERX2260038: Lung cancer

◢ ERX2260040: Lung cancer

◢ ERX2260044: Lung cancer

◢ ERX2260046: Lung cancer

◢ SRX2731713: Lung cancer cell line

◢ SRX6750797: MDA-MB-231

◢ SRX6750798: MDA-MB-231

◢ SRX1813580: MRC-5

◢ SRX1813581: MRC-5

◢ SRX1813582: MRC-5

◢ SRX1813583: MRC-5

◢ SRX1813584: MRC-5

◢ SRX1813585: MRC-5

◢ SRX2732210: MRC-5

◢ SRX2732211: MRC-5

◢ SRX5771664: N2102Ep

◢ SRX5771666: N2102Ep

◢ SRX5771668: N2102Ep

◢ SRX11904443: NCI-H1836

◢ SRX11904444: NCI-H1836

◢ SRX6852809: NCI-H520

◢ SRX11904441: NCI-H82

◢ SRX11904442: NCI-H82

◢ SRX10445285: Neural crest cells

◢ SRX10445293: Neural crest cells

◢ SRX10445303: Neural crest cells

◢ SRX10445312: Neural crest cells

◢ SRX20140860: Neural progenitor cells

◢ SRX20140861: Neural progenitor cells

◢ SRX20140862: Neural progenitor cells

◢ SRX20140890: Neural progenitor cells

◢ SRX20140891: Neural progenitor cells

◢ SRX20140892: Neural progenitor cells

◢ SRX5716451: Neural progenitor cells

◢ SRX5716452: Neural progenitor cells

◢ SRX5716453: Neural progenitor cells

◢ SRX330107: ReN-VM

◢ SRX330108: ReN-VM

◢ SRX277134: T.T

◢ SRX3367070: TE-5

◢ SOX2: STRING

MTF2
NAV2
NRARP
MANBAL
IQCH
AAGAB
THOC3
VANGL2
NEK6
KRT31
ITGB8
RCOR1
TRMT2A
RANBP1
INTS12
GSTCD
CCDC88A
FZD1
BAHCC1
SLC33A1
DUX4
LCA5
NOTCH1
SMAD3
UNC13B
ACAP2
PLA2G4B
JMJD7-PLA2G4B
JMJD7
WDFY2
MLEC
VWCE
NSA2
GFM2
TNRC18
LOC100129484
PHYHD1
CYB561D1
ATXN7L2
ZBTB40
PTMA
POLB
KDM3A
ARID2
PEX3
ADAT2
TJP2
MTRNR2L1
NDUFB5
MRPL47
ANKRD10
WDR36
CTSV
TRMT1
NACC1
TMEM262
RAET1E
SLC2A8
HEXIM1
KLF7
GBA
ZFAND3
TM9SF1
IPO4
CEP63
ANAPC13
RFLNA
TUT1
MTA2
OR10V1
DENND2D
CFAP20
MRPS14
PER2
OGA
ZNF335
STAU2
PGK1
SYNCRIP
LIMK2
CHSY1
ZSCAN2
RTRAF
SNX16
PTCHD4
MRPL48
F11R
RASAL2
HSPH1
PPDPF
TSC1
GFI1B
ADGRG7
ASF1A
BARHL2
PIK3CA
TP63
FAM168A
TMCC1
MTRNR2L8
HSPA4L
GALNT10
COL9A2
SLC9A9
CCDC152
HMGB1
USPL1
PYCR2
ACOT1
ZNF503
TUT7
PACSIN2
SLC44A1
ZNF195
KLHL6
CCL24
FAM227A
CBY1
RAB23
IGFL4
HEBP2
SPDYE14
SPDYE10P
KRT6A
POMT2
GSTZ1
MRPL44
SOX14
SECISBP2
CKS2
CYTH2
TTC39C
TRIM2
ZNF37A
FBN1
GSN
EAPP
LGR6
KIF5C
MYEOV
FRA10AC1
COL17A1
CASTOR2
YLPM1
H4C12
H2BC15
H2AC15
H4C11
FNBP1L
NDST1
CHST6
LSG1
ARIH1
GSC2
DDX17
SSBP1
TMEM88B
ANKRD65
KMT2A
MTRNR2L2
MSH3
DHFR
CCDC200
TAGLN2
MKNK1
MOB3C
GABPB1
FANCI
CHD8
CAPRIN1
NOXA1
FGF19
PAN2
IL23A
TMEM205
CCDC159
RAB3D
ZBTB6
RC3H2
BZW2
ANKMY2
GPC1
PPP1R13B
CELA3B
FMNL3
PTPRK
MRPL3
LY6G6F-LY6G6D
LY6G6F
MPIG6B
LY6G6C
LY6G6D
KDM2A
UBTD2
ENPP3
MED23
PAXBP1
OGT
ITGB1
JUP
ZNF426
LAMTOR1
ANAPC15
SKIL
ZNF440
BCAS1
AP4E1
CLPB
DKK1
ANXA11
GRK6
PHF5A
ACO2
FMN1
RMND1
ARMT1
NREP
DSTYK
SHC3
GBP6
MUS81
CFL1
RBMXL1
KYAT3
CYP2S1
CNN1
ELOF1
SHF
BMS1
ENKUR
EIF4A2
FRG2
ITPRIP
DKK3
STN1
PPP1R18
NRM
NUPR1
CPSF4L
KMT5B
CCAR2
C8orf58
CLTC
POLR3E
SMIM35
TMPRSS4
KIRREL3
SLC43A2
SLC29A3
MSANTD4
PGBD2
GREB1
INSM1
SOD2
WTAP
PRKCI
TMEM132A
VWA2
MRPL21
IGHMBP2
SPIN1
USP30
C17orf75
ZNF207
RAPGEF5
ADRM1
INSC
FSCN1
CHD6
LBH
STMN1
H3C15
H3C14
H2AC19
H2AC18
PAFAH2
H4C15
H4C14
GPR137
DGLUCY
UPK3B
BAIAP2
DUSP6
ALCAM
ESRP1
LMX1B
RARB
H2BC14
H2AC14
ID1
TRAK2
STRADB
NCOA7
SAMD1
MISP3
C19orf67
FAM83G
TRAPPC9
EDN1
ANTXR1
MCCC1
EIF3F
SLCO1B3
TNFSF15
SLCO1B3-SLCO1B7
IRX4
CEP41
RAB11FIP1
GOLGA7B
GALK2
COPS2
CAV2
TIPARP
MTMR1
AAR2
RPL27
IFI35
TMEM242
C1orf116
TMEM41A
SLC25A45
FRMD8
ZNF23
ZNF865
ZNF524
FIZ1
FGD3
EPS15L1
TRDMT1
RNF31
PSME2
EMC9
PSME1
PTGES2
SUGCT
MPLKIP
CYB5R2
RBBP5
SINHCAF
ADAR
ZNF106
SNAP23
MNAT1
PPIP5K2
GIN1
SPHK1
PHIP
BRMS1
B4GAT1
COX16
CEMIP2
STX16
OTUB2
TES
PHAX
ALDH7A1
AFAP1
NFIX
KNL1
MRPS31
SSR3
FAM102A
BICD2
ATAD3A
GAS1
GET3
RBFOX2
YWHAQ
N4BP1
NUF2
NPIPB5
NPIPB3
NPIPB4
GAST
PBX2
GPSM3
FBXL19
ABCA13
NUP160
POLG
ZNF791
ZNF490
ZNF408
ARHGAP1
SPATA12
EXOC5
AP5M1
TMEM101
NSUN6
ARL5B
MTDH
MICB
SLC35A3
ZBED5
SRPRA
NDUFS3
KBTBD4
FAM180B
ZSCAN9
CSRNP2
PLPP2
MIDEAS
CCDC116
MRPL42
TNS4
BCL2L1
LNX1
YEATS2
CEMIP
NPIPB8
OR4F17
PHLDB2
GRAMD2B
KLF1
GCDH
DNASE2
IKBKB
MYMK
MARCKS
HEXIM2
ATAD2
FAM220A
NIBAN2
ZBTB8OS
RBBP4
VARS2
GTF2H4
ITGB6
CACYBP
CDKL3
UBB
UBE2B
MAP3K9
ITGB4
GTF2H2C_2
GTF2H2
ETV1
PHRF1
LEMD2
GCHFR
C15orf62
MAPK6
SUSD4
CCDC57
CHMP4B
MRPS18A
NCBP2AS2
NCBP2
SPRED1
OLFML2A
NR6A1
GTF3C5
B3GLCT
GPR84
PPP1CC
VTA1
NMBR
NASP
LTBP1
H2BC17
H2AC17
TBC1D13
ARMCX5-GPRASP2
OR2B2
ARMCX5
TEFM
RTTN
TBPL1
ARL2BP
SGCA
COMMD2
ZNF627
WDPCP
MDH1
CELA3A
NPAS4
TCF12
CALM2
KLHL38
EIF3E
SRSF6
SMUG1
NFKB1
PNRC1
OPN5
DNTTIP2
C11orf49
ZNF436
ABO
FAM227B
RABGAP1
ZBTB26
DTWD1
GTF2H2C
SCOC
NFE2L2
TRUB2
COQ4
TRAF1
SMARCE1
MAPRE2
STK35
KLHL24
ERLIN2
NPIPB12
NPIPB13
ANKRD22
DISP3
PIMREG
AIPL1
ASXL1
ANKRD40
PRKDC
MCM4
ASB2
USE1
RNF103
CTDSP2
RALGDS
SELENOH
CCT2
RTN4
HMGN1
BUB1B
PSMB7
PTX3
GTPBP3
ANO8
PHF21A
NDUFS5
EFHC1
TMEM138
CYB561A3
UBE2F
C2orf42
CUEDC1
MEGF9
ZMPSTE24
TMCO2
ID4
NTMT1
C9orf50
CHD2
ADGRF4
ETV4
LPP
MNT
BCAR3
SLC24A1
INTS14
GLIPR1L2
DRG2
RBL1
PALD1
PTPRN2
KAT6A
NME1-NME2
NME1
RUVBL1
CCNG2
CD55
UNK
H3-3B
CLCF1
FAM189A2
ZER1
RCOR2
PAIP2
ONECUT3
PDE6D
COPS7B
UFD1
CDC45
NTF3
ITPK1
EXOSC2
DEFB110
MS4A2
FGF7
EGFR
SSBP2
TRIP4
PCLAF
CHST15
PCNP
TOX2
SIPA1L2
TCF7L2
SFT2D2
SNAI2
STAT1
BORCS6
POR
PEDS1-UBE2V1
PEDS1
CALM3
PPP5D1
NTRK2
SLC3A2
POLDIP3
STK3
OSR2
BRF2
ESRRA
CATSPERZ
OLFML1
POLR2M
GARS1
DNAJB2
LRRC37A3
ACOT2
CCNL1
SPRY4
SH3BP4
ZNF443
ALG10
WDR24
STUB1
JMJD8
SMARCB1
C16orf46
GOLGA6L3
FAM98B
RABGAP1L
KRT86
UQCRQ
GDF9
LEAP2
ARL14EP
RAPGEFL1
ZKSCAN8
OAZ2
GOLIM4
FCHSD2
IFRD1
DUSP1
HNRNPDL
ENOPH1
TSNAXIP1
RANBP10
RPS7
FHL2
DMAP1
RPS21
FAM160A1
AGO1
PPP1R2
RGPD1
RGPD2
ZNF391
AADAC
OR2M2
KLRF2
CLEC2B
VIT
LFNG
SMCO1
TBCA
NELFCD
DRD4
RNF168
GADD45GIP1
FGF1
PDIA4
IREB2
DLX5
EDARADD
MAP4K4
BRWD1
CCDC85B
PCYT1A
FIBP
CTSW
KMT2B
CORO1C
TYSND1
PSMD3
TP53AIP1
ZNF230
MACROH2A2
PIH1D2
NKAPD1
RAD23A
CALR
B4GALNT3
ABCC10
GTPBP6
ZNF561
CCND1
DCLRE1A
NSFL1C
NHLRC2
LOC100132202
ID2
TCP11L1
MEIG1
DCLRE1C
PC
H4C9
H2BC11
H2AC11
H2BC12
H2AC12
CREM
SLC35E2A
UBASH3B
FOSB
C18orf21
CDKN2AIP
NAB1
HR
ERAP2
NEFH
HSPE1-MOB4
HSPE1
HSPD1
ADAMTS8
PLEKHO1
RAB20
ANXA2
ZDHHC5
CLP1
CDK5R1
IQSEC3
AQR
TGM2
RFFL
CTNNB1
KLF12
C11orf86
CAMSAP1
SORBS1
TPR
ODR4
ZNF326
CSTF2T
GATA6
ZDHHC3
EXOSC7
CCDC88C
TMSB10
USP6NL
AHSG
PPIA
RAB18
STK32C
LRRC27
PRXL2A
NOTCH2NLB
RPTN
ZNF76
CYB5R4
SERPINB5
NPIPB11
CPT1A
SNX27
CPNE2
ALS2
DTD2
MRPL16
GOLGA6L4
ATF4
PEX12
AP2B1
PRMT5
BACH2
FXR1
EPC2
PDCD4
TTC32
EIF1AD
CST6
BANF1
SDK1
VCPKMT
BHLHE40
ZNF33A
USP47
TMEM167B
KSR1
LRP6
USP14
PDXDC1
ONECUT2
CTPS2
FANCF
FRMD7
FAM83B
PEMT
NR1H3
ACP2
C1D
SLC25A36
PSMD14
PPP1R9B
SAMD12
TMEM68
TGS1
GPR39
C11orf95
ZBTB25
ZBTB1
RBBP8NL
IST1
PHKA2
HDAC9
SRSF7
TSPAN14
HBP1
PBLD
HNRNPH3
SMTN
SYT2
WASF1
CDC40
CDK12
MED1
LTA4H
YWHAZ
KRT80
P2RY2
SOX21
ISL2
POU2F1
MFGE8
TMEM87A
GANC
GNAL
ZNF292
CHMP1B
SCPEP1
SRSF3
POC1B-GALNT4
KAT6B
GALNT4
DSG3
RXRA
CRLF3
ATAD5
ISY1-RAB43
ISY1
SOX2
FOXP1
PARP16
LRRC8A
KYAT1
E4F1
FAM3C
PGAP4
BLOC1S5
SMC2
DNASE1L2
RILPL1
STX10
IER2
DPY19L4
GNG4
CCDC24
IGF2BP2
TINAGL1
METTL9
GADD45G
CEP120
C15orf40
YBX3
DAPP1
ZFC3H1
THAP2
CSK
FAM228B
SF3B6
TP53I3
ABHD16A
MTBP
MRPL13
PCSK5
EPB41L1
PCYOX1
TIA1
SPEM3
ZNF518A
TMEM102
FGF11
CHRNB1
OPA1
GFM1
TOP3B
SFPQ
ANGPT1
PPARGC1B
SPINT1
FAM171A2
RASA2
PCNA
ALKBH3
TMEM230
WDR74
STX5
C2CD5
JMJD1C
PALMD
PPFIBP2
CCNJ
STARD13
FIGNL1
UCKL1
WDR27
TRIM29
C6orf120
BCL9L
ANKRD46
ENTPD6
PTPN6
C12orf57
ERCC6L2
MLLT11
CDC42SE1
FAM83A
ZNHIT2
FAU
TEX9
ZNF354C
RFX7
ZC3H6
CENPE
ZNF184
FRRS1L
YPEL4
NUDCD1
ZNF117
PSMC3IP
FARSA
CCDC117
PMEPA1
ART1
GSAP
DPP3
RAD51AP1
C12orf4
TTC14
RPS26
FETUB
TSEN54
LLGL2
CASKIN2
NOL3
KIAA0895L
EXOC3L1
E2F4
SPRING1
RNFT2
FANCC
HSPB3
RAB14
WDR11
GTF3A
FRY
FURIN
SF3A3
MKRN2OS
TMEM249
SLC52A2
FBXL6
MKRN2
PSMF1
PSMD1
EIF2D
ARMC12
LLGL1
GSG1
TPM1
MAN2C1
ANKK1
SHOX2
RSRC1
KLF9
FKBP5
ZBTB33
COPS7A
MAPK8
TMC1
UBALD2
DYNLRB1
RABL2B
ZNF124
KCNAB1
CSTB
NPIPA3
NPIPA2
RRP1
ANKRD12
DHX36
YIPF2
TIMM29
PRPF18
SPRR2E
TIMM22
SLC36A3
HGS
ARL16