ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662634 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◣ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SPATC1L
TEPSIN
NDUFAF8
SP2
DOLPP1
DNM2
ARRDC4
OSBP
KATNB1
RAB5B
PMEL
CDK2
SP1
ARHGDIA
P4HB
ZNF687
STIP1
NLK
RFX1
ANKHD1-EIF4EBP3
ANKHD1
UBE2C
EVI5L
ACTL6A
TOP2A
DUX4
GOT1
G3BP1
ARID4A
HSP90B1
TMEM94
STT3A
PXMP4
TCERG1
ARNTL
JUP
GLRX5
EIF2AK3
SKA2
PRR11
TDRKH
BAZ2A
ATP5F1B
MPV17L2
PITPNM1
PRR14
FBRS
ARMC1
KAT7
RBM27
TMEM60
PHTF2
SNRPF
TMEM218
HSPA5
TUBB4B
FAM166A
HNRNPUL1
STPG3
DROSHA
C5orf22
ZNF48
TBC1D10B
MYLPF
SYP
PRICKLE3
TRAF2
ZFYVE21
XRCC3
ATP5MC1
SHC1
FLAD1
CKS1B
MSANTD4
H2AZ2
NPR1
ILF2
MVD
RECQL
GOLT1B
PDK2
COQ8A
MTMR4
SEPTIN4
WDR97
MAF1
CYC1
STAP2
MPND
HNRNPL
TMX2
MED19
HNRNPC
RFWD3
NCDN
KIAA0319L
PGK1
TEDC1
CRIP1
VIRMA
SEL1L
SLC39A2
METTL17
PSPN
ALKBH7
FAAP24
CEP89
CIC
PSMD4
CHCHD6
KPNB1
PHPT1
AJM1
TOM1L2
DRC3
MAMDC4
ANAPC5
DCAF7
SERP1
EIF2A
THRA
MED24
SRGAP2
FAM72A
KAT6B
TOMM40
OS9
PRKACA
TMEM70
ELOC
GPR108
TRIP10
TMEM160
ZNF77
ZSWIM3
ACOT8
SPAG7
E4F1
PGP
MLST8
BRICD5
AGER
C16orf95
RNF5
AGPAT1
SPSB3
MRPS34
EME2
IMMP1L
ELP4
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
SULT1A4
SULT1A3
UNG
ALKBH2
PROSER3
LIN37
HSPB6
PPWD1
CENPK
EEF1AKNMT
TBCCD1
DNAJB11
AK2
KHSRP
NCBP2AS2
NCBP2
NFATC2IP
MTMR12
PITX3
GBF1
HIKESHI
SLC25A25
NAIF1
SARNP
ORMDL2
INCENP
CAMTA1
DNAJC14
NUMB
BOLA2-SMG1P6
ABHD2
TICRR
AP3M2
KCTD2
ATP5PD
PWWP2A
FRYL
RXFP4
KHDC4
CNOT1
SPTLC2
AKR1E2
PRPF40A
ARL6IP6
PAN2
IL23A
ZNF143
BCAS3
UBALD2
YIF1A
TMEM151A
DPAGT1
H2AX
HMBS
LRRC45
CENPX
RAC3
ATG9B
ABCB8
GOLPH3L
MAMDC2
CENPF
CNOT3
DCTN4
DCUN1D4
ZWINT
COPZ1
PKLR
FDPS
ANP32A
XAB2
STXBP2
PCP2
ZSWIM4
TMEM217
TBC1D22B
SRP9
HBP1
LRCH4
FBXO24
GOLGB1
MSMO1
RBM15B
MANF
RBM42
ETF1
TYK2
GPR84
CCDC146
NUP107
PRRC2B
ENSA
PHB
ZNF688
MTFR2
ALKBH3
ZBTB5
ZFYVE26
RAD51B
CGGBP1
NDUFB3
FAM126B
ZNF654
SIN3A
SIRT2
NFKBIB
CYB5B
TMCO6
NDUFA2
IK
HMX2
BUB3
FAM126A
INTS4
CBX5
FAM72C
SRGAP2B
FAM72D
HNRNPA1
YJU2
PAIP2B
RAD23A
CALR
NFE2L1
KDM4B
FARSA
CDC23
HGS
ARL16
IARS1
ZMAT2
HARS2
HARS1
WBP1L
MSTO1
PNPO
PPP1R3F
FOXP3
RPLP0
GCN1
MAP3K3
ZSWIM1
SPATA25
NEURL2
SSR3
BRIP1
PPP1R12B
UBE2T
MTR
WDR25
WARS1
SLC25A42
MCM3
TMPO
PCGF2
RBM48
PEX1
SPRING1
RNFT2
ECT2
CEP131
BIVM-ERCC5
THAP1
POGLUT2
BIVM
IGSF9B
FRG2C
ISY1-RAB43
ISY1
CENPA
CYCS
F11R
FAM161B
COQ6
NUPR2
CHCHD2
PPP2R5A
TROAP
WDR89
IFT27
ACAP2
PI4K2A
MORN4
PANK2
DDX49
COPE
LARS1
WIPI1
IBTK
GLCCI1
RAP2A
PLEKHA8
SLC33A1
HMGCS1
GPR137
RPS20
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
ZNF555
VPS26B
NCAPD3
NRL
DCAF11
ZDHHC16
EXOSC1
H2BC14
H2AC14
CDKN3
NUDT2
KIF24
H3C10
H2BC13
H2AC13
NUF2
POU5F1
TCF19
CCHCR1
ZNF785
USP16
RWDD2B
GATAD2A
KDM4D
CWC15
USHBP1
BABAM1
KLHDC10
SRPRA
ABL1
DNAJB5
KANSL1
POLR2G
CNEP1R1
RAB4B
MIA
ZBTB3
SLC39A5
RNF41
NABP2
DDOST
PCYOX1L
BOD1L1
UVRAG
FBH1
ANKRD16
MLH1
EPM2AIP1
ISOC2
LZTFL1
TNRC6B
NME7
BLZF1
SPC25
FDFT1
TMA7
CCDC51
ATRIP
PLXNB1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
RGS14
LMAN2
LENG1
IFI35
SECISBP2
CKS2
RPL27
NDUFAF2
ERCC8
LMOD1
VAMP2
PER1
LCMT1
PMEPA1
TIMM17A
FRMD5
MOGS
WBP1
INO80B
VCP
FANCG
CNPY3
HNRNPAB
MYH10
PDCL
H4C9
H2BC12
H2AC12
DICER1
INTS3
OPA1
DCAKD
NMT1
HYLS1
TTLL5
ERG28
TXNIP
TSACC
CCT3
RTRAF
POC5
PCNX3
MAP3K11
EXOC4
TLE3
FRA10AC1
ZFAND2A
ZNF595
ZNF691
RBM8A
PEX11B
MRPL34
DDA1
ABHD8
CYLD
PRMT1
PICK1
SPRYD3
EIF5
CHD6
SYNE4
LOC101927572
ALKBH6
RAB11B
KMT5C
WDCP
USF3
CLDN9
STARD4
BRAP
ACAD10
UBP1
DHX8
RUVBL1
SLFN14
ENPP5
ZNF57
KCNAB2
MNS1
PDXP
PARPBP
NUP37
WDR45
HMGCR
ZBTB9
RUBCN
KRR1
LAPTM4A
LINC02210-CRHR1
TRAFD1
CDCA8
C1orf109
GATAD2B
TPD52L2
ABHD16B
STIL
ARHGAP19
H3-3B
UNK
TOM1
NGDN
ETV5
ASF1B
RARS2
ORC3
RGMB
SETD3
CCNK
RMI2
CST6
EIF1AD
BANF1
LTN1
PSMA5
USP21
PPOX
HAGH
FAHD1
FAM156A
FAM156B
CCDC77
DGLUCY
RPS6KA5
UBE2J2
CDK5RAP3
GSK3B
SAP30L
TOGARAM1
KLHL28
RRBP1
JPT2
SLC2A8
INTS1
TMEM97
KIF20A
BRD8
TXNL4B
DHX38
DDX39A
NUCKS1
SF3B5
KLF6
ANP32E
SNRPA
C19orf54
STX18
XPO1
RRN3
SLC25A28
TMED10
UMAD1
YBX1
ZNF626
FRG2
TIMMDC1
TPX2
TTBK2
TIMM10
SMTNL1
BAZ1B
RBM14-RBM4
RBM14
CKAP5
H4C12
H4C11
H2BC15
H2AC15
DPH2
ATP6V0B
B4GALT2
TTC14
FAM204A
ASPM
DLGAP5
TMEM248
HSD17B12
UTP23
STK40
HDGF
TTC16
PTRH1
CFAP157
RPS21
MRPL24
WDR81
TLCD2
PMS2
AIMP2
TSKS
AP2A1
LCN12
FBXW5
C8G
ZNF8
CKAP2L
VBP1
ESR2
TPCN1
HIBADH
IQCD
GFM1
NEMP1
OTUD6B
RAB3A
LAS1L
NOL6
RWDD1
CD68
EIF4A1
CALR3
C19orf44
MAP3K13
ZNF141
PIP4P1
OSGEP
APEX1
MCCC1
MVK
PNP
GMNN
GSTT2B
GSTT2
DDTL
DDT
YIPF4
TPRKB
BAHCC1
POP5
ZBTB32
AP2B1
KLHL20
PEX12
GET3
TRAPPC6B
PNN
ARL17B
ARL17A
SAP30BP
RECQL5
STAT2
APOF
MZT1
BORA
CREBRF
EAPP
RBM15
NEK2
MFAP3
FAM114A2
GRK6
PHF12
ALG10B
ZMYM5
BPGM
MCM10
ZNF564
USP42
ERI3
SLC25A19
RPL18A
PLPBP
SRGAP2C
FAM72B
RAB5C
RPN2
MROH8
PDIA4
ZCCHC17
SNRNP40
SAMM50
CCDC116
SDF2L1
ALG8
NAT16
ZNF91
KBTBD8
H3C4
FAM222B
GHITM
H4C5
H2BC7
H2AC7
TCTN3
PSMA3
EIF3F
FBXO31
MAP1LC3B
ZNF774
TMEM45A
SSBP1
SCAI
RAD54L
CCDC200
PPM1B
TXNDC16
GPR137C
MDM1
CFAP43
ZBTB6
RC3H2
ATP7B
ALG11
VPS4B
PMF1-BGLAP
PMF1
ZNF574
ATPAF2
GID4
MEIG1
DCLRE1C
VEZT
FGD6
EFCAB6
PAF1
RPL37
CARD6
PRADC1
CCT7
WDR53
FBXO45
DNAJC25-GNG10
DNAJC25
KIF1B
ZNF680
STX16
SAMD10
PRPF6
DAZAP2
THYN1
ACAD8
FBXO5
RND1
FAM117A
ZNF727
NCOA2
GGCT
BUB1
PABPN1
SENP2
TCIRG1
NDUFS8
GPD1
COX14
MRPS30
ZBTB26
RABGAP1
ARL14EP
RAD54B
TMCO1
SCFD2
SYS1
FRG1
ZNF384
WBP2
CLNS1A
PRCC
PPP2R5E
NF2
ESYT1
ZC3H10
RPL41
STXBP5
TIPRL
ZNF830
CCT6B
TRMT6
MCM8
UBL5
PIN1
PGBD4
EMC7
FAM83D
SELENOK
ACTR8
ZNF875
RRP9
PARP3
SZT2
MED8
EIF3M
GINS1
OTUD5
CDC6
SEBOX
FER
NFYC
TMEM199
POLDIP2
RTN4IP1
QRSL1
C5orf51
LZTS2
CCDC66
WHAMM
FSD2
KDM4A
C1orf54
AAR2
TWNK
MRPL43
CIART
CWF19L1
UGP2
EHBP1
IFT20
FNBP4
TNFAIP1
ELK1
SLC46A3
CAND1
H4C3
H1-6
FRS2
CTNNBL1
CD2BP2
LMCD1
TMEM79
SMG5
DOK3
DDX41
OXSR1
GINS2
PTBP1
CEP164
ATG9A
ANKZF1
DBNDD2
ZNF138
CANX
PC
CHP1
EXD1
VASN
FUT8
DCDC1
DNAJC24
RLN2
ARL6IP1
STARD3NL
TMED7-TICAM2
TMED7
KCTD16
YIPF5
H2BU1
H2AW
TMBIM6
PA2G4
PTMA
SETD5
CIT
RGL2
PFDN6
SV2A
WDR46
MTMR11
GABPA
ATP5PF
SF3B4
PARL
TADA1
NHP2
SLIRP
ALKBH1
ORC2
CCDC61
GTPBP6
UCKL1
HACL1
BTD
PODNL1
DCAF15
RPS26
RNF34
CACYBP
KIF18B
YPEL4
CLP1
ATF7-NPFF
ATF7
ZNF736
DYNLL1
ANAPC15
LAMTOR1
MBD1
CXXC1
PSMB7
C22orf39
NUDT5
CDC123
RNF181
MMACHC
CCDC163
ZNF408
ARHGAP1
TFB2M
CNST
TMEM150A
TESK2
IVD
SIVA1
GSTO2
SLC25A32
DCAF13
MYH14
RLN1
GTPBP4
COQ7
VTA1
NMBR
SYCE1L
MON1B
ZNRD2
FAM89B
EHBP1L1
TTC31
CCDC142
L3MBTL2
FAR1
LOC100421372
HSPA14
CDNF
MAT2B
ULK4
RAB3C
PSPH
CCT6A
SLC39A9
ERH
TTC33
PUM3
TMEM38A
SMIM7
PSMA6
OSCP1
COX16
ZNF85
RPS7
ANXA6
DNAJC19
TTK
RALA
NAT10
ETFDH
C4orf46
SRSF2
MFSD11
GTF2H3
EIF2B1
COG3
ARAF
NUDT16
SF3A3
SLC25A36
RPS14
SFXN5
ZNF302
MED30
EIF2B2
UQCC1
C6orf89
TUT1
MTA2
WDR74
STX5
XRCC4
TMEM167A
BMS1
OGFOD1
NUDT21
PSMC3IP
DDX50
MRPS23
CGRRF1
ZSCAN20
H3C6
H2BC8
H2AC8
ZNF304
METTL18
C1orf112