ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584307 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◣ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
RABL2A
MAPKAPK5
POLR3F
DZANK1
NME6
PSMD1
IPO13
ZNF335
S1PR4
NCLN
DYNC1LI2
TAOK3
SUDS3
CACTIN
RWDD1
NUP85
NEUROG2
VTI1B
VDAC2
POLR2E
GPX4
MRPS7
MIF4GD
GGA3
FAM187A
EFTUD2
CCDC103
HSPA9
NUP205
PSMG2
CEP76
TSN
TBCK
AIMP1
NVL
GOSR2
REXO1
DUX4
DCTN1
TSNAX
STAM2
RPL21
SKP1
ZNF576
IRGQ
EXOSC5
BCKDHA
C19orf48
SEC61B
ALG2
PES1
STAM
CAPRIN1
PNO1
SRD5A1
RBBP5
NNAT
BLCAP
SLC35B1
UPF2
FARSB
LYRM4
FARS2
ACTR10
ATP5MG
PCBP1
NEUROG3
PAK1IP1
C6orf52
NDUFA4
HADHB
HADHA
GOLGA5
PSMD12
ZRANB2
TMED1
COX7A2L
VARS1
TTC8
DPH6
SUPV3L1
ANAPC7
LBX1
PI4KB
SART3
ISCU
PDAP1
BUD31
UFM1
MRPS5
ICE1
RPL35A
IQCG
LMLN
SF3B3
COG4
SELENOF
HS2ST1
RPS23
ATP6AP1L
RABGGTB
ADK
AP3M1
RBKS
BABAM2
USP1
PROSER1
NHLRC3
ARF1
FAM104A
C17orf80
SMC2
SFI1
EIF4ENIF1
LOC102724770
DGCR6
PIP4P1
OSGEP
APEX1
FRG2C
G6PC2
DNAJB7
XPNPEP3
ST13
RPS12
RPS27A
CLHC1
BICRA
HSPA1B
ICMT
HES3
PAF1
ZNF503
UBE2I
COMMD1
CCT4
TM9SF1
IPO4
TSSK4
OR6B2
NDUFA10
HES1
BNIP3
VEZT
FGD6
MRTO4
EMC1
ATOH1
ARHGAP11A-SCG5
ARHGAP11A
LARP7
ADNP2
FZD8
ARID3C
DCTN3
PIN4
C6orf47
APOM
BAG6
RPS29
LRR1
NEUROD1
RBBP7
GTF3C4
DDX31
INSM1
WNT1
NFKBIL1
DDX39B
ATP6V1G2
UNKL
C16orf91
ARHGAP10
RPN1
FRG2
CD79A
ARHGEF1
CCDC33
ZNF608
SUCLG1
NEUROG1
CDC73
EIF2S3
OAZ3
MRPL9
ANKLE2
TAF9
RAD17
AK6
GLRA1
SKIL
PMAIP1
NAV3
URM1
TPM1
CALCOCO1
PCBD2
RHBDD3
EWSR1
NR2F1
CDX2
PDHX
APIP
SEC11C
RPL7
RDH10
CR1L
PPP1R1B
LPIN1
GADD45GIP1
ME3
RAB11FIP1
PRUNE2
OR10AC1
PTGES2
UNCX
ZGPAT
ARFRP1
NHS
PAH
ASCL1
EVX1
EVA1A
STK36
RNF25
ZP4
SERINC5
PRDM12
RIMKLB
PSMB5
DLX4
ALKBH5
IGFBP2
KDM8
ZNF585B
ZNF383
DIPK1B
SRSF11
LRRC40
LZTS1
ANK2
NOXO1
SYNGR3
GFER
CNPY2
DBX1
TLE2
SH2B1
PDHB
PPP1R1A
CCDC200
MUC20
ETS1
PLAGL1
GORAB
FGF19
TMEM70
ELOC
AXDND1
RYBP
LRATD2
ITGB6
FAM222A
ERRFI1
SNAPC1
ECM1
KIF26A
ECEL1
DDAH1
CCN1
KIF21B
WDR59
LAMA4
TRABD2B
EIF4H
HOXB1
RBPJ
NELFA
SLC7A5
CLDN2
PDE12
MYLK4
RGS12
SULF1
MEIS2
TEX46
KDM1A
DMBX1
DTX4
CASC3
DLL4
PRRX1
BFSP1
CLEC18C
HK3
KDM2B
MYRIP
RAI14
SPCS1
GLT8D1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
BBS9
ZFHX4
SYNPO
TBC1D8
LRGUK
TMEM120B
MALRD1
ASXL3
BRWD1
PDE6B
CLGN
TLE4
ZNF746
FAM118A
JAKMIP1
CRYAA2
CRYAA
DDX3X
TPRA1
MCM2
TESC
TIGD1
EIF4E2
HOXB3
HOXB4
NUTM2D
GFRA3
TMA16
PPP1R35
POP5
ZCWPW1
MEPCE
NRDE2
HOXA3
HOXA4
CDIP1
ID1
SCGB1A1
CERCAM
HOXD3
HOXD4
SOAT2
IGFBP6
ASB6
DGKZ
TRIM65
MRPL38
CCNDBP1
ARL14EP
MBTPS1
MNT
B3GALT5
C6orf132
CS
TDG
C12orf73
GTF3A
NRXN1
SMARCA2
SPHK2
RPL18
FAM83E
SLC7A6OS
PRMT7
FEZF2
SLC10A2
USP17L21
USP17L20
USP17L12
USP17L22
DUSP6
CNTLN
PNKD
DAPL1
PCBP2
PGLYRP1
IGFL4
VOPP1
FABP7
SMPDL3A
SOX21
COL17A1
SYBU
NCBP3
RPS10-NUDT3
RPS10
ZFHX3
PAX8
GATA3
CCDC43
MRPL3
IL17RD
TMEM212
FOXP2
RFX2
LRIG1
LRRC1
ZNF341
RNF138
SFT2D2
SOCS3
GADD45G
NRXN2
LRRC4
DMRT3
RNF32
ACBD6
SKOR1
ADGRL2
MBNL3
TMSB15B
MFSD3
GPT
IFT20
TMEM97
RECQL4
LRRC14
NEUROD4
AQP6
RASL10B
ERCC1
CADM3
RPS26
WDR47
CHN2
CPVL
DUSP2
ASTL
RRM1
DAAM1
MXI1
GAD2
NPAS4
SRRM3
TMEM275
CDH16
CCND1
MDFIC
CALHM6
ZNF292
RARA
CATSPERG
SLC39A6
CBFA2T2
BAIAP2
C12orf42
LDLRAP1
CLEC19A
TMEM107
STARD13
RCOR2
HNRNPA2B1
CBX3
MUSTN1
ITIH4
TCHP
NEK7
PKNOX2
VANGL2
E2F6
CHD8
TPST2
HNF1A
CPLX1
OR8J1
AP1B1
ZBTB25
ZBTB1
MYO10
CNN3
CDX1
KLHDC8A
SPACA1
LRP2
CDC42EP2
PARP11
SGK3
TPH2
DNAJB2
ID2
FOXP1
GPR20
RXRG
PEX2
SALL1
CLEC18B
SEMA4B
ZNF891
ZNF10
CAMTA1
HNRNPD
UGT8
LEKR1
GUCY1A1
EVI5
ITPRIP
RUNX1T1
RPS24
POLR3A
HHIP
MSX2
KMT2A
DHX32
MGST1
RHBDD1
TRDMT1
RCOR1
HEY1
TNNI3K
ZNF783
FTCDNL1
KAT6A
CEP41
NINL
TUBB3
MC1R
SEMA6D
PLXNB1
TBC1D15
RGL1
POLR2J3
MET
SCARB1
CEMP1
PDPK1
ARHGEF28
PPFIBP2
NEK3
ZNF367
USP17L13
USP17L17
USP17L15
YAP1
SLC25A6
USP17L11
USP17L18
USP17L10
MTRNR2L1
RARB
MTRNR2L2
MSH3
DHFR
MTRNR2L8
HOXA1
DUSP29
SP2
EAPP
DHRS3
ARID3B
SPATC1L
CYP26A1
NFE2
IER3
FLOT1
HOXA2
PALM2AKAP2
H2BU1
H2AW
NDUFS7
ZSWIM1
SPATA25
NEURL2
ZNF775
KCNN4
KAT6B
DPP9
TBL2
CTSA
USP29
GPR108
BHLHE40
TLE3
LEFTY2
PCGF1
TRIP10
CDH18
LBX2
VSIR
WDR74
STX5
PHOX2B
MAMDC2
TTI2
METTL24
LIN28A
ST18
HOXA5
TBX3
ARHGDIA
PHC2
ASB2
P4HB
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
TAF12
DNM2
MLEC
ARHGAP24
CITED2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
COL23A1
S100A10
FBXO31
NCOA7
HOXC4
MINDY2
HPD
SP5
TNFRSF19
MAP1LC3B
HUS1
SYTL3
CRABP2
PPP6R3
FILIP1L
ANKRD28
H2BC17
H2AC17
COL11A2
PDE4D
EXOC2
XKR7
FRA10AC1
RPL22
RNF207
RAB5B
PMEL
CDK2
FXYD2
HPCAL1
E4F1
SMAD3
CNTN1
MRPL34
DDA1
ABHD8
PKDCC
NFIA
BAZ2A
STX18
HOXC6
KDM6B
FRYL
TLE1
STAP2
ID3
KANSL3
FER1L5
OTUD7B
ARSG
TMEM242
VIP
DYNLT1
DONSON
DOLPP1
GPC6
ARRDC4
PDZRN3
PGK1
ATP5F1B
ABLIM3
SEPTIN9
ATF6
MAB21L2
ETAA1
POR
CERK
MSX1
SIRT4
EXOSC4
SH3BP2
JUP
MFSD10
UPF3A
ARHGAP22
MRPL20
PPCDC
RARG
PC
NINJ2
BCL3
KATNB1
QPRT
PANK2
PTK2B
SQSTM1
KCNAB2
SHC1
TMEM101
TRIB1
CCDC174
RING1
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
SMIM28
MTMR4
LFNG
TMEM9
SMG6
KAZALD1
GATA4
ATP1A1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
C9orf92
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
TLX2
NOL4L
EIF1B
HSPA1L
HSPA1A
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
MRPS31
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
ANGPTL4
DLC1
RHOQ
ATP6V1E2
PCNA
ITGAV
RPL34
STAT1
BAHCC1
NFKBIA
NOTCH2
RPLP1
ARHGAP30
IQSEC3
RAB26
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DNAH1
DCAF11
ZFAND2A
PDE4DIP
TRIM26
SSBP4
ZNF740
CSAD
PXYLP1
PRDM10
CDS2
ARRDC2
OSBP
NLK
GRIK2
ATP1B1
SHF
EIF2AK3
SKI
ZNF77
STIP1
RPS7
CSF3R
HMGCS1
PSMD6
SOD2
AHDC1
SERPINE1
CLDN11
ART1
DSCAML1
TCP10L
TRIM7
HAND1
RGS3
SLC25A25
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
SLC45A4
RAB11B
CAPG
KNL1
BRMS1
AGO1
ACYP1
CAPNS2
TRIB3
GADD45A
G3BP1
ZNF564
MYBPC3
LPCAT3
KMT5A
IKBKB
NCOA2
BORCS6
EVI5L
GOT1
SPRED2
RTN4
PIPOX
MACROH2A1
CCL26
EMP3
FTL
SOCS2
ELL
SH2D6
CBX4
LMO4
RBM15
STX1A
TNFAIP2
POLG
METRN
COL21A1
CTSW
ADM
SLC35E2B
FAM107B
SMIM20
PDP2
TPCN1
TCTEX1D4
PLK3
BTBD19
CRLS1
ZNF827
SYNJ2
GRSF1
B4GAT1
METTL3
LIG3
LMOD1
CORO1A
TCF7L2
HTR1F
MTF2
MBD6
DDIT3
MIDN
METTL11B
RBFOX2
MYEOV
ZC2HC1C
CPSF4L
KBTBD11
MOB3A
IZUMO4
TRIM2
GLRX5
ANTKMT
NEK1
CP
CLDN9
PKN2
FST
DAGLB
JUNB
GMEB2
WSB2
SLC6A12
SCHIP1
LCK
FAM167B
TMEM94
PYGL
CSNK1D
NAIF1
PLA2G2A
TUBA1C
SEC22B
CNKSR3
IFI16
ARHGEF3
UBE2F
SHB
ETF1
ARAP1
KDM3A
INAVA
SORL1
NCDN
KIAA0319L
PRMT5
MRPS28
EIF3D
TLN1
SLC30A4
CREB3
ARID5A
NKX1-1
IGFBP7
CNPY3
NKD1
MPND
UNC5A
NAV2
SH3YL1
ACP1
FLAD1
CKS1B
SLC19A1
H3C12
KIAA1549
ABCA4
SH3BP1
FOXA3
PCM1
BCAR3
DIABLO
PPFIBP1
CMSS1
TACC1
TXNRD1
SPOCK2
LINGO1
ARID4A
SORBS2
KLF16
FGR
LMNA
ZBTB18
SIT1
H4C15
H4C14
H3C15
H3C14
NAGLU
PLEC
UBC
CHODL
LRRC45
CENPX
CYP51A1
COX5A
MRS2
SERPINB1
RGS5
MMD
RNF144A
HNRNPL