ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX17639399 | NB-4
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◣ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

TBL2
PDE6B
ZGPAT
ARFRP1
IER3
FLOT1
NFE2
SKIL
MTRNR2L1
DUX4
PRAM1
LAPTM5
SKI
INAVA
KAT6B
SMIM20
COL23A1
MTRNR2L8
ITGA5
RBKS
BABAM2
PHRF1
C16orf54
ZFYVE28
CFAP99
RARG
LIMK1
NR2C1
ICAM1
UPF3A
B4GALNT3
KANSL3
FER1L5
CXXC5
SMG6
NOL4L
ZNF746
PPCDC
MTRNR2L2
MSH3
DHFR
LAT2
SPDYE9
SPDYE8
SPDYE15
SPDYE13
SPDYE11
GH1
CSHL1
CEBPE
HIP1
STX1A
ADD1
ARID3B
ART1
CCDC88B
ACSL3
SRCAP
LOC730183
CCNDBP1
RNF166
CTU2
FTL
BAX
SEPTIN2
HDLBP
NR2C2
ERCC1
SBF1
PCNA
CDS2
NAA10
ARHGAP4
NDUFA4
RNPEPL1
DUSP28
ANKMY1
DHRS3
ZNF217
ARHGEF18
TXNDC11
ZNF414
CXCR4
RASGRP2
ACACA
ZNF740
CSAD
B9D1
MFAP4
MAPK7
MTG1
PKN1
LMLN2
FRG2C
KAZALD1
ANPEP
NCOA4
SH2B1
ADAM17
ARIH2
CCL2
GPATCH8
RAPGEF1
NFILZ
SERPINB1
GPR35
CYTH4
MOB3A
IZUMO4
CBFA2T3
LCOR
ANKRD18B
MYADM
TRPM2
BIN2
PICALM
ACTL9
EPM2A
COX5A
ADGRE2
NCOA2
MID1IP1
ANKRD10
ZNF775
CCDC102A
ADGRG5
TRIM8
GSG1
EIF4A3
GALNT9
WNT1
WNT10B
CCND3
ZNF584
ZGLP1
MEF2D
BCL3
FCGR1A
KIAA0513
SHISAL2A
HPCAL1
EMP3
CCDC114
MYO1F
MRPL4
CTBP2
TMEM182
MFSD9
STN1
TPRA1
MCM2
MED9
BTNL9
DRC7
PITPNM2
SH2B3
YARS1
S100PBP
PLIN2
INAFM2
SH3BP1
PGLS
THAP11
CENPT
NUTF2
NUDT4B
SH3BP2
NANP
AGTRAP
GDPGP1
CIB1
ARL4A
MRPS31
CDX1
PDGFRB
CD38
OTUD7B
NAMPT
COX20
CCDC174
BMF
SRSF2
MFSD11
S100P
P2RY2
OPN1MW3
OPN1MW2
OPN1MW
ZSWIM1
SPATA25
NEURL2
CTSA
DNAJB1
STX10
IER2
LYL1
E2F3
IRF1
KRI1
CDKN2D
ZC3H4
GRK6
KEAP1
IDH1
CTBP1
TEX28
FRG2
MAMDC2
KMT5A
PRELID3B
MACC1
MYRF
SPDYE17
PXYLP1
ASB2
JUND
VENTX
IQCN
PIK3AP1
SQSTM1
FASTKD1
TMEM104
NAT9
SIGIRR
FUT7
C9orf139
ABCA2
AEBP1
HES1
MFN2
HBP1
REPIN1
RFX3
AP5B1
SMUG1
TCAP
PNMT
NFKBID
TYROBP
HCST
PIM3
EEF1A1
ZCCHC24
ING1
CARS2
MACROH2A1
GFOD1
NRDE2
MYEOV
RPS6KA1
MMP9
ID1
SOAT2
IGFBP6
PDCD4
TTYH3
CTTN
SIK1B
SIK1
TAGLN2
COL4A2-AS2
CALHM3
SCAP
ETFB
NKG7
CLDND2
PHF19
STK17A
CEP41
CPSF4L
GTPBP6
ICAM3
RAVER1
SREBF1
ARID2
PDP2
AHNAK
TNFRSF10B
PLEK
SLC25A6
LRMDA
FMNL1
STON2
DRD4
NIBAN3
TBL1XR1
TOX2
OCEL1
CTCF
SPHK2
DBP
SOD2
MBD6
DDIT3
WTAP
SLC12A6
TRAPPC10
NUTM1
NOP10
SIGLEC8
DZIP3
CIP2A
GYPC
LSM8
MBP
NKX1-1
DIPK1A
CTSD
BOLA3
MAMSTR
GRAPL
SSBP4
CBX4
ISYNA1
CD300A
MAPK8
SPAAR
HRCT1
USP49
MRPL34
DDA1
ABHD8
ZNRD2
FAM89B
EHBP1L1
C10orf105
SYK
MIDN
PARP2
CCNB1IP1
DNAJC16
CASP9
OAZ1
EGLN1
TMEM205
RAB3D
CCDC159
CA11
RAB11FIP2
CYP2E1
NFATC3
RHOG
MNT
RNF149
NCR3
LTB
LST1
ARSG
BAZ1B
POLD2
SRXN1
MAP3K8
IRF5
ICAM5
ICAM4
GPCPD1
PRSS22
WDR12
CARF
DENND4B
MYO18A
DNAJB2
KIFC3
LOC388282
LFNG
MYO1G
C15orf39
ESRRA
CATSPERZ
RARB
BAIAP2
RREB1
PKN2
RBM7
C11orf71
MAP1LC3B2
VPS37C
UCP2
KMT2E
PGAM5
PPP1R12C
UBE2R2
CRTAM
GCHFR
ATXN2
TRERF1
ANTXR2
C15orf62
SPDYE12P
COMTD1
FLNA
ROM1
EML3
B3GAT3
RAB37
MAP2K3
RNF157
PACC1
IL1A
KRAS
GATD3B
GATD3A
TRAM1
HESX1
NCF1
APPL1
OR6B2
NDUFA10
RAB11FIP1
HRH1
EVPLL
SPAG8
HINT2
RAC2
HDAC7
PRDM11
HUS1
IRF2BP2
RASSF2
TSKU
TAF1A
NR4A3
SLC25A35
RANGRF
PPL
BPI
ASB1
NRL
DCAF11
ZBTB45
SLC27A5
AFF1
AZIN1
PIK3R1
USP37
CNOT9
ADPRHL1
FBXO31
MAP1LC3B
STX18
PTTG1IP
IPPK
PCTP
SYPL1
RFC5
PDLIM7
AXL
SLC3A2
M6PR
KLRG1
HHEX
PRXL2B
REL
PPP1R27
MCRIP1
NPBWR2
S1PR2
TSPAN32
C11orf21
AFG1L
CD248
NOTCH1
AKAP10
CHI3L1
CPQ
MPRIP
CCDC200
BLOC1S5
CD82
PHC2
ZNF595
AP1B1
HNRNPA2B1
CBX3
SPNS3
TCTEX1D4
PLK3
BTBD19
PPP3CB
DENND2D
STING1
PDSS2
BHLHE40
UPP1
ZNF438
UMODL1
RARA
CETP
RHOC
RAD23A
CALR
FARSA
SLX1B
SLX1A
BOLA2B
BOLA2
SULT1A4
SULT1A3
SPATA1
GNG5
SECISBP2
CKS2
RELT
CCDC9
DARS1
SP1
BRMS1
KLF3
MED21
TM7SF3
RIN1
SPIN1
BAG2
SLC66A2
ZNF446
ZNF324
CD1C
RBPJ
RASSF4
MUC3A
ATP11A
NOC4L
DDX51
NIPSNAP2
CNOT2
SOCS5
BOLA2-SMG1P6
PEX14
DFFA
C5AR2
SH2D3C
CDK9
XPNPEP1
TP73
WRAP73
NME6
AP2S1
ZNF335
RABL2B
RABL2A
PSMD1
RWDD1
MAPKAPK5
TAOK3
SUDS3
CACTIN
NUP85
POLR3F
DZANK1
FAM187A
EFTUD2
CCDC103
NVL
IPO13
DYNC1LI2
POLR2E
GPX4
VDAC2
HSPA9
GOSR2
VTI1B
PSMG2
CEP76
NUP205
MRPS7
MIF4GD
GGA3
HADHB
HADHA
RPL21
S1PR4
REXO1
NCLN
TBCK
AIMP1
EXOSC5
BCKDHA
C19orf48
NNAT
BLCAP
DCTN1
TSNAX
STAM
ATP5MG
SLC35B1
TSN
STAM2
SEC61B
ALG2
FARSB
PSMD12
LYRM4
FARS2
SRD5A1
PNO1
PES1
PAK1IP1
C6orf52
RBBP5
UPF2
SKP1
ZNF576
IRGQ
LOC102724770
DGCR6
ZNF503
COX7A2L
CAPRIN1
SART3
ISCU
ACTR10
ZRANB2
DPH6
TTC8
GOLGA5
SUPV3L1
RPL35A
IQCG
VARS1
PI4KB
LMLN
TMED1
RPS23
ATP6AP1L
RPS12
SMC2
ANAPC7
MRPS5
FAM104A
C17orf80
SELENOF
HS2ST1
RABGGTB
PCBP1
USP1
PDAP1
BUD31
HSPA1B
SFI1
EIF4ENIF1
UFM1
ADK
DNAJB7
XPNPEP3
ST13
RPS27A
CLHC1
AP3M1
ICE1
C6orf47
APOM
BAG6
PROSER1
NHLRC3
PIP4P1
COMMD1
OSGEP
APEX1
CCT4
SF3B3
COG4
PAF1
TM9SF1
IPO4
RPS29
NEUROG2
TSSK4
NFKBIL1
DDX39B
ATP6V1G2
PPP1R1B
LRR1
NEUROG3
PTGES2
HOXA3
ZNF608
PIN4
SUCLG1
OAZ3
MRPL9
UBE2I
ARF1
ICMT
HES3
HOXA4
PDE12
HOXA1
DUSP29
ARHGAP11A-SCG5
ARHGAP11A
CDX2
TAF9
RAD17
AK6
STK36
RNF25
SP2
EAPP
MBTPS1
MRTO4
EMC1
GLRA1
LARP7
SPATC1L
BICRA
CYP26A1
VEZT
FGD6
SNAPC1
FZD8
UNKL
ID2
ARHGAP10
SEC11C
RPL7
RDH10
EIF2S3
GADD45GIP1
CDC73
SYBU
NR2F1
C16orf91
PLAGL1
PMAIP1
G6PC2
CBFA2T2
CCDC33
HOXA2
PALM2AKAP2
H2BU1
H2AW
TMEM107
DUSP6
RPN1
GORAB
NDUFS7
NEUROD1
GTF3C4
DDX31
MUC20
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
CNPY2
IGFBP2
DPP9
LZTS1
TLE4
ZFHX4
BNIP3
USP29
GPR108
TPM1
TLE3
TRIM65
ZNF585B
ZNF383
LEFTY2
BBS9
PCGF1
TRIP10
LBX1
AQP6
CDH18
MRPL38
SPCS1
GLT8D1
PDHX
APIP
FOXP1
ERRFI1
DDAH1
LBX2
VSIR
WDR74
STX5
PHOX2B
HOXB1
TTI2
METTL24
LIN28A
ST18
RUNX1T1
HOXA5
TBX3
ARHGDIA
TLE2
INSM1
ETS1
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
PCBD2
TAF12
LPIN1
DNM2
MLEC
DAPL1
ARHGAP24
ARID3C
FGF19
PAH
CITED2
SLC39A7
RXRB
HSD17B8
TBX2
ANKLE2
HOXB3
ALKBH5
NHS
S100A10
URM1
NPAS4
DLL4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PRUNE2
TNFRSF19
SYTL3
CS
CRABP2
PPP6R3
FILIP1L
ANKRD28
DCTN3
H2BC17
H2AC17
RPS10-NUDT3
RPS10
COL11A2
TMEM70
ELOC
UNCX
SYNPO
CCN1
PDE4D
EXOC2
XKR7
FRA10AC1
PDHB
CALCOCO1
RPL22
RNF207
RAB5B
PMEL
CDK2
FXYD2
AXDND1
E4F1
SMAD3
CNTN1
KIF21B
ZFHX3
ANK2
PKDCC
NFIA
BAZ2A
CLGN
ARHGEF28
CHN2
HOXC6
FABP7
KDM6B
CAMTA1
FRYL
TLE1
STAP2
ITGB6
ID3
CPVL
TMEM120B
TMEM242
DLX4
VIP
PPFIBP2
DYNLT1
DONSON
DOLPP1
GPC6
KDM2B
ARRDC4
ASB6
RPS24
POLR3A
PDZRN3
PGK1
ATP5F1B
ABLIM3
SEPTIN9
ATF6
CERCAM
MAB21L2
ETAA1
FOXP2
POR
CERK
POP5
CADM3
MSX1
SIRT4
EXOSC4
JUP
NELFA
MFSD10
PRRX1
SMPDL3A
ARHGAP22
MRPL20
PC
NINJ2
RHBDD1
KATNB1
QPRT
PANK2
PTK2B
KCNAB2
SHC1
TMEM101
TRIB1
RING1
MYLK4
MEIS2
SRSF11
ABHD2
CCNL2
ABCC10
MBNL3
ADAP1
ZNF687
SMARCD2
RFX1
CLCN3
SMIM28
MTMR4
TMEM9
GATA4
ATP1A1
MALRD1
DACT2
NBPF1
ZFP36
PLEKHG2
CBX5
MIDEAS
MRPL3
USP17L21
USP17L20
USP17L12
TRIM46
KRTCAP2
C9orf92
ZNF367
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
TLX2
SOCS3
EIF1B
HSPA1L
HSPA1A
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
LRRC40
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
ANGPTL4
DLC1