ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8814860 | BE(2)-C
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◣ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ATF6
TBX2
RPS7
LIPC
C9orf92
EIF3D
SMIM28
RGS5
PPFIBP1
ABCB1
DLG2
AQP6
HTR1F
DAOA
RFPL1
PDE3A
ST6GAL1
PCM1
HTR3B
UNC5A
FAM162B
INPP4B
PPP1R12A
EGLN3
RDX
DPP6
XRN2
ISOC1
C2orf83
SYBU
HIGD1C
NRP2
KCNK16
OTUD1
NEFL
SMAD1
TIAM1
MAP3K13
TBX3
MFSD6
PPM1L
PSME3IP1
RSPRY1
SEMA5B
ARHGAP24
SLC37A3
RAB19
GRIK2
TEX101
MUSK
PDZRN3
CRISPLD1
PMFBP1
DIABLO
PTPDC1
STARD4
TTC30B
MAN1A2
FILIP1L
ENOX1
FRA10AC1
PIK3C2G
CBFA2T2
NRSN1
KIAA0319
TMOD1
LINGO1
APLP2
ZC3H3
ASB6
SNX7
LINGO2
SLC10A4
VIP
LONP2
ABCC11
AOPEP
IKBKB
VPS26B
NCAPD3
PRICKLE1
ARHGEF28
CCDC73
DYNC2H1
DCUN1D5
ENPP3
ATP1A1
MTRNR2L2
MSH3
DHFR
ABCA12
KPNA4
MYT1L
HGF
CGAS
SYTL3
ANKRD28
DYNLT1
OR5AR1
DGKB
KLHL1
CERK
CDPF1
IGFBP7
RHBDD1
CNKSR3
TSHZ3
RASA1
CAPNS2
HTR4
DCTN4
FAM91A1
GRK5
IGFBP5
APOL6
LAYN
TLE4
LSMEM1
DOK2
FAM228B
MARCHF11
PFN4
AFF3
ZNF148
LNX1
NRCAM
PSMD6
KCNMB4
SNX4
STARD13
FAM160A1
NR3C1
SLC25A26
GPR19
CCDC182
NEK1
PIK3CG
SH3BP4
CASD1
CD180
SUCNR1
CRABP2
ZZZ3
CAMSAP2
MRPL42
ERAP1
ARHGAP22
STX18
TNFRSF19
SCHIP1
MAGEB3
MAGEB2
CADM2
CCDC172
DRGX
COL21A1
FGF20
AGBL3
RUNX1T1
SYNPO
HS3ST5
OXR1
CALM2
RIMBP2
DEFB130B
DEFB130A
CCDC196
CXCR4
PYGB
AOAH
MTNR1B
RNF111
DIAPH3
ETS2
SPATA24
RBFOX3
EPYC
CHGA
ZNF335
FBXO34
TRIM2
CNP
HEATR5A
FSHR
PTPRR
RGS7BP
ZBTB18
CLCN3
MAP2
SPZ1
HECW2
EDNRA
RAPGEF2
TEX30
POF1B
CCDC168
SESN1
CEP57L1
ZNF608
PNOC
ZNF330
FRMD3
ATP6V1G3
ENPP7
MMP7
COMTD1
IL12A
CRYGB
MYOT
SRPK2
RAMP1
ABRA
FAM124A
MYRFL
SHLD1
KIF1A
HNMT
DNAJB8
KPNA5
CDH18
CPXM2
HDAC9
TTI2
HOXC4
HOXC6
SLA
HOXC8
GPR88
CDH17
MTRNR2L8
BMPR1B
PCLO
DCLK3
AGTR1
CNTN1
DLC1
B3GNT4
SCML4
PITPNB
FILIP1
VSTM2A
WIPF1
PELO
ITGA1
SIPA1L2
SGK1
SERP2
GATAD2B
PRSS12
TJP2
POLR2E
GPX4
QPRT
NAV2
SKP2
LMBRD2
DCP1B
KIF3B
UBL4B
FBXO7
TRIM7
SNX27
ATP5MG
PRELID2
DPYS
CLMN
PDE4D
PC
RPL24
RARB
BZW2
C6
SEPTIN9
SORBS2
SLC35A3
PCDHAC2
ZNF804A
ASAP1
NREP
USH2A
SLC19A1
ELF5
MYH15
WDR19
LIG4
ABHD13
GCHFR
RMDN3
CLDN12
C1QL3
KCTD7
GSDME
PXYLP1
RBM20
MRTFA
LGSN
C1orf21
DUSP6
SPATA7
IMPG2
VAV3
RP1L1
NFIB
MCCC1
MCC
GRWD1
KCNJ14
OLFM3
BIN1
HAPLN2
ABCC6
NOMO3
NOMO2
CHRNA3
BLOC1S5
GNL2
GABRR1
RAB30
CARS1
JRKL
CCDC82
OR10AD1
DPYSL3
RABL2B
MNS1
CDK17
RPS29
CHRNA1
HMGCS1
THSD7A
SART3
ISCU
GPR22
C14orf93
HMCN2
FGL1
CTXN2
MYEF2
GJA5
TRIL
PLEKHA5
CABCOCO1
LIMA1
ATP2B4
PAM
ZFHX3
LMNTD1
HSPA4L
NCS1
NOMO1
POU4F3
MTUS1
RWDD1
UFM1
OTOR
CCDC33
CNGB3
DENND1B
ADAMTS18
ACKR4
ADAMTS19
RBM15
TNS3
CYP26A1
KBTBD11
SLC22A23
SEC22B
PPP6C
SDCBP
RABEPK
SHOC2
BBIP1
GAB2
ZNF157
EXOSC5
BCKDHA
CYB561
GPR68
PANK3
TYRP1
SHC1
FLAD1
CKS1B
ANGPT1
PTGER2
DACH1
CYB5B
CDK6
STAT1
ST3GAL6
MTRNR2L1
HAND1
DIPK1A
MMRN1
ABHD2
SLC7A2
TMCC1
LIFR
RBBP5
GFOD2
LMO3
PHOX2A
LAPTM4A
UBE2D1
RPH3A
MGARP
PHC2
ECI2
CD200R1L
DUSP4
QRFPR
SORL1
RPL35A
IQCG
LMLN
CBX5
GADD45A
CKMT2
TAF15
DUSP23
NELFCD
PWWP3A
NHLRC1
SNTB2
OPRM1
GCSAM
DCN
SNX6
RASD2
HNF4G
NRP1
TRPM3
TENT5A
GOSR2
CDIN1
KIAA0408
RIIAD1
CELF3
LOC105378979
DAB2IP
PRRT1B
UCK1
DNAH1
GEMIN8
TRAF3IP2
LAMB1
MDFIC2
TAOK3
SUDS3
NFIA
GYS2
NME7
BLZF1
PRKAG2
COX7A2L
ZFHX2
HPCAL1
MMP15
NUBPL
TOX3
RPS12
GTDC1
SAMD11
SLC25A30
TNFSF18
LRRC69
ACTR3C
AMBN
MYL4
GPR162
HSD17B12
RAPGEF1
ATP11A
SEC61B
ALG2
RASL11A
ROBO1
ANTXR2
ARF1
CPO
TCF4
CHRNA9
TMEM161B
DNAJC12
SOGA3
PSMD12
GPER1
EMC2
MYPN
OR2A4
FOXP1
B3GAT2
PES1
RPS23
ATP6AP1L
PLAC1
CLDN11
PPFIA2
HAO1
RNF34
IL7
P2RY12
KIAA1549
STOM
PRMT6
MACROD2
SNAP25
RC3H1
CHD9
PLCL1
FAM219A
DNAI1
SMAD9
UBL3
POU5F2
JUP
SLAIN1
TIGD6
HMGXB3
TVP23C
TTC30A
COX7B2
TSNAX
NBN
ATF1
FARSB
LMO7
SMIM3
GLYAT
PRR16
SGPL1
RGS13
FGD4
BRD4
CLMP
PRLHR
ZNF423
LIMS1
AADACL4
DDX39A
FGF13
ANK2
NKX6-2
ZNRF3
IQSEC1
DNAJC15
ENPP2
NUP205
ELAVL4
TMEM265
PHKG2
HLF
PSTPIP1
TES
KCNK2
FBXO30
RBFOX2
SPATA4
TNIK
FAM187A
EFTUD2
CCDC103
DEFB131B
NNAT
BLCAP
TMEM107
EVPL
GLIPR1L2
PLA2G4E
CHP1
PLAC8L1
CNMD
PGAM4
SOX5
C1GALT1
B4GALT6
POLR3F
DZANK1
TPM1
LRRTM4
ICA1
ABAT
THAP6
DNAH8
MYO18B
BDNF
NOX3
CYSLTR2
VSIG10L2
SLC2A9
MMD
SLC6A2
PKIB
H3Y2
GLDN
DUX4
LOC283710
THNSL1
RNF19A
TECTB
EFNA5
CTSS
C19orf48
PFKP
FGF1
USP20
C9orf78
SRD5A1
CACTIN
C21orf91
SCG2
NCOA7
MGAT5
COL3A1
DNM3
OR10R2
KRTAP19-7
LYRM4
FARS2
FOXB2
FAR1
TTC39A
GSKIP
DCANP1
GK2
SPSB4
KIF26A
ATXN7
NRXN1
CRYGC
CRYGD
OTOGL
TPD52
ZFPM2
SLC26A7
UBA5
ACAD11
HTN1
G3BP1
BUB3
FMN1
THBS4
BFSP2
NEBL
SPOP
EIF4E3
ARHGAP28
CFAP100
SCG5
FBXO8
CEP44
FAM104A
C17orf80
MSRB2
TSC22D1
CD177
RBP1
FRMD6
NRG1
KCNV1
CHD1L
PRKAB2
CDK15
PIGM
LPIN1
NT5E
MAP3K7CL
CCT8
FRY
NUP85
CDH12
ENAH
RPL21
NGB
TMEM9
MYB
AGR3
SLIT1
CTBP2
RIMS1
TBPL1
LCORL
ZADH2
TSHZ1
CDC7
DGKI
FCER1A
SLC22A8
UQCRQ
GDF9
GAST
POU4F2
PLSCR2
LIG3
NELL1
NVL
RAB33A
SYT16
TRMT2B
FAM135A
ANAPC7
KYAT1
HCN1
RNF145
KANK4
AFG1L
PPP1R12B
CFAP20
SSH1
HEXB
CHODL
HNRNPA1
GLCCI1
LEPR
THEMIS
PRKAR1A
RECK
OR5K4
TRIM55
ZNF77
DNM1L
CBX6
RAPGEF4
SCYL3
ADCY8
INA
CDH2
MARCOL
RARA
TRDMT1
ANO3
COPS2
MAPK1
GJD2
IL19
HSPA1B
STAU1
BCL2L13
DHRS3
NFASC
SYT4
FLRT3
SRGAP3
CALCA
FAXDC2
LMO1
TRPA1
ADK
AP3M1
TGFB3
ERBB4
MAGI1
PTCHD3
STRN
IL17F
EXOSC8
ALG5
PGBD3
PSPH
CCT6A
KREMEN1
UBC
HHAT
SLC17A2
ADGRA2
ADI1
PLXNA1
BRSK2
CDAN1
DERL1
IGLON5
WFDC5
KCNS1
HABP2
SH3BGRL2
PSMD1
PDAP1
BUD31
SPAG9
ARNTL2
SPATS1
DKK2
TVP23B
KRT19
C6orf226
SETD9
SYT2
KRTAP5-5
RNF144A
EYS
EPC1
GOLGA5
SUPV3L1
CXXC4
IZUMO1R
TRAT1
SOBP
TOX
HSPA9
S1PR2
SH2D1A
SLC18A1
SRGAP2
FAM72A
DIS3L
RTRAF
PPM1E
NFKBIL1
DDX39B
ATP6V1G2
ZFHX4
SAMSN1
FAM163B
ST6GALNAC5
PI4KB
DMD
ACACA
OAZ3
MRPL9
CMSS1
BCAS1
UPF2
SLC6A5
TBC1D23
SMUG1
TARBP1
CELF1
PLET1
PCSK1N
SNAPC1
CREB5
COLQ
PRDM7
SNX22
CSRNP3
PRRT4
USP2
NECAB1
CFAP126
KRT15
E2F5
MEI4
PGM2L1
STK36
RNF25
IMPDH1
IRF2BP2
LMO4
MYT1
NEDD4
DPYD
ANKDD1B
C1D
SLC25A44
LRCH2
SEMA6D
BIVM-ERCC5
MUC15
ATG14
EID1
MRPS7
MIF4GD
GGA3
ARX
FABP2
KCNJ6
SLC37A1
RSPH1
TNIP3
DTD2
SF3B3
COG4
NUMB
LAPTM4B
SOS2
PARP14
HOXD13
HOXD12
TMED1
TRIB2
CCNP
CAVIN4
TTC9B
ACYP1
ZC2HC1C
CENPP
OR8J1
NOL8
MLH3
DCAF5
OR8K1
DEFB109B
NDUFA4
CYP51A1
KCNIP4
RGS16
GPR83
RNASEL
DDAH1
TRIM24
MAP3K3
SVOPL
CSF1R
DNMBP
DYNC1LI2
CILP
DEFB136
DEFB135
BRMS1
B4GAT1
SRSF10
IL24
ARHGEF37
TSACC
CCT3
MACROH2A2
SMIM14
CHRDL2
SHD
LRRTM3
MMP16
TRIM40
IFT80
PIP4P1
OSGEP
APEX1
FAM72C
TMTC2
RNF6
HORMAD2
FAM135B
CARD17
TNFRSF10C
RBM18
MRRF
SLC23A2
FLVCR1
EIF3J
SPATA45
VAPA
CCDC68
ABR
KIF2B
STX16
FAM81B
PACSIN3
MIER1
DNAI4
C2CD4D
TOMM70
LNP1
THEM5
CNKSR2
TACC1
P2RY14
ASIC4
LMBRD1
TSPAN19
LRRIQ1
CLDN8
ANK1
SH3TC2
RFPL2
ASPH
SIMC1
TRIM36
PCGF1
LBX2
TLX2
TXNRD1
B3GNT3
HLTF
ESRRG
WBP11
C12orf60
SMCO3
HTR2B
PCDH15
ETAA1
RABL2A
PAK1IP1
C6orf52
FOXC1
SLC41A3
RIMS2
C2CD4C
MCU
BEND4
CDC42EP3
SULF2
XPOT
CBFB
TAS2R50
VDAC2
CLIP4
PWWP2B
ANGPT2
ADAM12
OIP5
NUSAP1