ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039037 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◣ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2A
RABL2B
DUX4
MAPKAPK5
ZNF335
PSMD1
CACTIN
ZNF503
DYNC1LI2
EXOC2
NME6
POLR3F
DZANK1
MAB21L2
RWDD1
TAOK3
SUDS3
PRDM6
PSMG2
CEP76
VTI1B
IPO13
NUP85
FAM187A
EFTUD2
CCDC103
S100A10
VDAC2
NVL
HOXA1
HOXA2
GATA4
STAM2
LYRM4
FARS2
SKP1
HSPA9
S1PR4
NCLN
GOSR2
TBCK
AIMP1
UBXN10
PLA2G2C
UPF2
DCTN1
SRD5A1
POLR2E
GPX4
NUP205
ATP5MG
IMPG1
SP2
CCKAR
IER3IP1
TSN
REXO1
IFI16
PYDC5
EXOSC5
BCKDHA
COX7A2L
MRPS7
MIF4GD
GGA3
SEC61B
ALG2
NNAT
BLCAP
C19orf48
STAM
TSNAX
MRPS5
ACTR10
ICE1
NTRK2
SLC35B1
RPL21
GOLGA5
TTC8
VARS1
PSMD12
PNO1
ARHGEF10L
FARSB
PDE4DIP
SUPV3L1
HADHB
HADHA
BBS9
PES1
FAM104A
C17orf80
PAK1IP1
C6orf52
HOXB3
HOXB5
RASL12
KBTBD13
DMD
PI4KB
HAND1
FRG2C
RABGGTB
SFI1
EIF4ENIF1
CAND1
USP1
ZRANB2
MECOM
ZNF576
IRGQ
RPL34
ETFBKMT
DNAJB7
XPNPEP3
ST13
LOC102724770
DGCR6
RBKS
BABAM2
ADK
AP3M1
ANAPC7
UBE2I
SMC2
CELF4
SCRG1
HAND2
TM9SF1
IPO4
TSSK4
MOG
UFM1
RPS23
ATP6AP1L
METTL3
SALL2
LAPTM4B
DPH6
RPS12
RUNX1T1
RPL35A
IQCG
LMLN
CCDC33
LRRN4
NDUFA4
CAPRIN1
SART3
ISCU
ERI3
SF3B3
COG4
CD34
PCBP1
MYO1B
MVB12A
BST2
PAF1
TBX2
SELENOF
HS2ST1
PROSER1
NHLRC3
NFKBIL1
DDX39B
ATP6V1G2
RBBP5
SUCLG1
NFIA
CLGN
TNC
TMED1
RPS27A
CLHC1
NEO1
LMO4
PIP4P1
OSGEP
APEX1
OR6B2
NDUFA10
SIRT4
C6orf47
APOM
BAG6
TBX3
KITLG
NR2F1
COMMD1
CCT4
OAZ3
MRPL9
TXNDC2
HOXC4
HOXC6
HOXC8
VPS13A
CITED2
DMAC1
RTL1
SFRP1
DDAH1
CCN1
PTGES2
ELOVL6
MEIS2
HEXIM2
PPP1R1B
KDM2B
HOXA3
HOXA4
HSPA1B
HOXA5
PDE12
POLD2
MYL7
CD244
OR5K2
CRABP2
UNC5C
RARB
BICRA
NTAQ1
MRTO4
EMC1
SLC3A2
C10orf82
SHOX2
RSRC1
PRXL2A
ANKLE2
TEX9
RFX7
MEIS1
LOC102723360
PLCZ1
CAPZA3
BRINP1
HES1
PDAP1
BUD31
LIN28A
FAM200B
PLEKHG1
PLEKHF1
NDUFV2
ZAP70
CCR9
LZTS1
GGCT
PLAGL1
CCDC183
TMEM141
STK36
RNF25
TLE3
DACT2
SKIDA1
EIF2S3
PRUNE2
DIAPH3
JUP
NUBP1
PDE6B
CXXC4
MELK
HPCAL4
LIX1
FOXP1
TMEM120B
TAFA3
KRTAP23-1
KRTAP9-7
MGST1
ARID3C
DCTN3
CPA1
ZNF608
PIN4
RPL7
RDH10
CYP26A1
SNCG
MMRN2
FAM205A
ZFHX4
HOXB1
ST3GAL6
GPR84
SKIL
METTL24
SLC19A2
KCNN4
WT1
SSH1
TAF9
RAD17
AK6
ZNF157
TPM1
PPFIBP2
RARA
EMP1
TTI2
P2RX6
SERHL2
CNR1
ADAMTS8
MRTFB
NXPH2
ASPG
FGF5
ZNF3
COPS6
PAX3
ACKR3
ZBED5
FRG2
REEP5
TMEM9
ARHGAP11A-SCG5
ARHGAP11A
TYRO3
HIP1
EXOC1L
ID2
NQO2
ERVW-1
FLVCR1
SPATA45
PAEP
FOXP2
SEH1L
PPFIA2
HOXB9
COLEC12
TLE2
NIBAN1
MEOX1
TMEM14B
ZGPAT
ARFRP1
CATSPERG
FLRT3
PACRGL
SPECC1L
PGPEP1L
ITPRID1
KIAA1217
KRT24
RPN1
POP5
FYB2
RPLP1
ARHGAP10
FGF7
USP34
LRIG3
SYNE2
ZNF587B
GADD45A
SOX5
KCNJ3
TUBB
MDC1
LYPD1
SEPTIN9
IL23R
TNP1
RBPJ
GC
CNPY2
RPS24
POLR3A
PLCH2
PKDCC
SPTBN1
HOXB8
HOXB7
GOLGA8T
GOLGA8K
TMEM107
BNC2
GK2
SYCP2
PPP1R3D
FAM217B
SCMH1
TXNDC16
GPR137C
C8orf34
SH3RF2
ARF1
ACVR1
MAGEB3
MAGEB2
OLFM1
C4orf54
NDUFS7
HOXC5
TPBGL
CDH18
GPR20
EIF3D
PEDS1-UBE2V1
PEDS1
CFLAR
CCDC200
POLR2D
KDM3A
TXNRD1
KLF9
MME
CYP51A1
ZBTB8OS
RBBP4
PCDH18
GABRB2
PKIG
SERINC3
RPS29
LRR1
CCDC73
RAPGEF3
PRTG
SLC48A1
GAS2
KRTAP13-1
FXYD2
DSCAML1
ZBTB18
GADD45GIP1
HOXD3
IL6ST
PHLDB2
CCNDBP1
HOXA6
AKR1B15
SLC25A25
STX11
PCDH15
SLC17A4
SPRR2F
CCDC174
HLTF
TLE4
SAMD11
ANAPC15
EXPH5
SMAD3
SACM1L
FBXO34
ITGA3
CNTN1
SALL4
AKAP12
CLDN14
GBP3
RND3
SH2B1
MNT
SMUG1
ZFHX3
UBL4B
SVOPL
PKNOX1
SPDL1
POLDIP3
MMP28
PPIC
ABCC9
SEC11C
NAGLU
TMEM14A
ADRB3
OBP2B
OR6V1
H2BC5
H1-4
FEM1B
COLQ
CCDC59
EVPL
KANK1
TMSB4Y
FZD8
ERCC1
ZSWIM6
POU2F1
CBFA2T2
TIGD4
ARFIP1
GOLGA8N
GOLGA8H
MYPN
CDH15
AQP1
ECHDC1
CAPN7
COPRS
CTNNB1
RAPGEF4
AGBL3
AKAP13
PDZRN3
FAM81B
TCF7L2
PSMB5
EYA1
TAF12
MROH7
CDC42EP3
SLC22A5
CPHXL
CDIN1
CACNG1
SNX16
GPR82
GORAB
ZNF585B
ZNF383
VANGL2
TNFAIP8
SIPA1L1
FGF8
NPM3
OPA3
REC8
SLCO2B1
DCAF4L2
AMACR
HERC6
TBX18
SVEP1
HMCN2
RIPOR2
IGF2BP3
GUCY1A1
C9orf153
CDC73
GTF3C4
DDX31
HUS1
PPP1R21
ASB15
COPZ1
EGFLAM
SRP9
RNASEH2B
CCN2
MPDZ
NELL2
BCL11B
SCHIP1
PPFIBP1
SORBS2
ZNF397
RASSF4
RAPGEFL1
GFRA3
SPRY1
NNMT
CHST9
C1orf105
SFXN3
PDZD7
FAM131B
PIGC
PGF
ZYX
MXD1
SST
RBMS3
GLS2
EPC1
BOD1L2
ACY3
DCAF4
CLCN5
MCF2L2
SPIRE1
TRPS1
DHRS3
HMX2
BUB3
RBM20
MXRA7
COMMD8
C12orf50
C12orf29
MAPRE3
GYPC
OSBP2
RAPGEF2
PFKFB3
CEMIP
NFIB
RCOR3
MRPL52
FSIP1
SLC7A7
ZNF341
ARL6IP5
UBA3
NKX2-6
FAT2
JCAD
TNFRSF19
HEY2
NDRG4
HMGCS2
MTUS2
CADM3
PDK1
PDGFRA
SMIM28
SMURF1
NRG2
XRCC5
ERCC4
LIG4
ABHD13
SIGLEC15
SCOC
ARHGAP42
PGK1
ZNF77
CDK6
NEBL
WDR82
GLYCTK
OLFML2B
ASXL3
CDK20
RNF111
TMCC3
MYLK3
YWHAZ
MAGEA11
R3HCC1L
ZNF430
ID3
KCTD7
LIPC
ZP3
GDPD5
NT5C3A
GNGT1
C6orf132
PRICKLE1
RBM18
MRRF
XPR1
TMEM185A
LARP7
USP17L21
USP17L20
USP17L12
USP17L22
KCNIP4
RAB17
HAPLN1
SEMA3E
KIF4B
ZNF746
NME4
RERG
PGAP6
RPL22
RNF207
HNRNPD
INPP4B
OTUD4
AGER
PBX2
GPSM3
TYRP1
PDE6A
SLC7A5
IER5
ANKRD33B
ZNF611
CCDC175
ALKBH5
SEBOX
SARM1
APP
VTN
IRS2
TULP4
SHB
RCOR1
TEPSIN
NDUFAF8
SLC25A6
LMOD1
VOPP1
SYNJ2BP-COX16
SYNJ2BP
ATP6V0D2
MAD2L2
DRAXIN
ARHGAP19
ANXA11
CACYBP
NR4A2
FHL2
LRRC36
BTBD16
BNIP3
SRSF11
LRRC40
GATA6
TCF4
THRA
MGST2
ABCA4
FBXL18
ACTB
PLA2G2E
SALL3
FGA
MUSK
CNMD
DUSP6
CEP70
SSBP3
MGAT1
CFAP69
TRIP12
FBXO36
AMOT
CD248
RAB37
SLC19A1
SLC9A3R1
CDK15
ESRRG
SERPINA7
PCNX4
ZNF853
NME1-NME2
NME1
TSSC4
PGLYRP1
IGFL4
CDH3
WDFY3
NDUFB3
FAM126B
ENTPD4
ABLIM3
SERTAD2
ZNF280D
ACYP1
ZC2HC1C
RALGPS1
PKP2
MID1
MYOM2
RPS4Y1
KRT18
NR2F2
PDE11A
ZNF367
DLG2
CRKL
ELAPOR2
ZSCAN30
RFPL1
CS
OLFML1
MEGF6
ITGBL1
KIF2C
SLITRK6
ALPK2
PCBD2
CPPED1
DNAH12
HSPB3
CNTNAP5
MPPED2
ASB6
WWP2
TNNT2
SPRED2
STOM
SRI
BNIP2
IL1RAPL1
NR2F6
MIER1
DNAI4
KCNMA1
EAPP
HNRNPA2B1
CBX3
NCAM2
PDHB
CLASP2
ATXN2L
MMD
CEP41
SNX8
USP2
CHODL
MLIP
PLAAT2
C9orf92
MEIS3
PDCL3
CSRP1
FNDC5
F3
SUPT7L
SLC4A1AP
KAT6B
UBE2H
QPRT
CELF2
SLC28A3
TTC13
GRWD1
KCNJ14
CTF1
BCL7C
TGM2
ARHGAP28
DIP2C
CLIP3
ELK4
RANBP17
RGS5
GFRA1
BARD1
PAQR8
PMFBP1
TSHZ3
MLLT10
DGKZ
SEC24A
DNAJB4
ALX1
ART1
ART5
MTRNR2L1
NEUROG2
NEUROG3
MTRNR2L2
MSH3
DHFR
MTRNR2L8
ICMT
HES3
WNT1
ID1
DUSP29
SOAT2
IGFBP6
CDX2
MBTPS1
ARID3B
GLRA1
SPATC1L
VEZT
FGD6
SNAPC1
UNKL
NFE2
SYBU
C16orf91
PMAIP1
G6PC2
IER3
FLOT1
PALM2AKAP2
H2BU1
H2AW
NEUROD1
ZSWIM1
SPATA25
NEURL2
ZNF775
MUC20
ZP4
SERINC5
NEUROG1
ATOH1
RAB11FIP1
IGFBP2
DPP9
TBL2
CTSA
USP29
GPR108
BHLHE40
TRIM65
LEFTY2
PCGF1
TRIP10
LBX1
AQP6
MRPL38
SPCS1
GLT8D1
PDHX
APIP
ERRFI1
LBX2
VSIR
WDR74
STX5
PHOX2B
MAMDC2
ST18
ARHGDIA
PHC2
INSM1
ASB2
ETS1
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
FAM222A
LPIN1
DNM2
MLEC
DAPL1
ARHGAP24
FGF19
TPRA1
PAH
MCM2
SP1
SLC39A7
RXRB
HSD17B8
COL23A1
NHS
URM1
FBXO31
NPAS4
DLL4
RHBDD3
EWSR1
ADNP2
NCOA7
MINDY2
HPD
SP5
MAP1LC3B
SYTL3
PPP6R3
FILIP1L
ANKRD28
H2BC17
H2AC17
RPS10-NUDT3
RPS10
COL11A2
TMEM70
ELOC
UNCX
SYNPO
PDE4D
XKR7
FRA10AC1
CALCOCO1
RAB5B
PMEL
CDK2
HPCAL1
AXDND1
E4F1
KIF21B
ANK2
MRPL34
DDA1
ABHD8
BAZ2A
STX18
ARHGEF28
CHN2
FABP7
KDM6B
CAMTA1
FRYL
TLE1
STAP2
ITGB6
CPVL
KANSL3
FER1L5
OTUD7B
ARSG