ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671313 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◣ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SNAPC1
KNL1
DUX4
MTRNR2L1
EAPP
WDR74
STX5
SHF
PPP6R3
PRMT5
ZBED9
CCDC200
BRMS1
B4GAT1
ART1
SACM1L
VSIR
HMGN4
NDUFS7
MTRNR2L2
MSH3
DHFR
POLR3E
TRIM7
BORCS6
FRG2C
PCGF2
H4C8
DPP9
FBXO31
MAP1LC3B
POLG
NPR1
ILF2
SIT1
CCDC107
ARHGEF39
HSPA6
LTA4H
LUC7L2
FMC1-LUC7L2
FMC1
METTL26
WFIKKN1
PSMA3
IRX2
C5orf38
GSTA4
C8orf37
RAB11A
RNASE4
ANG
FCGR3A
ELF1
WBP4
ID1
MPZL1
TMEM259
CNN2
H2BC17
H2AC17
OR2B2
STAT6
SMARCC2
FCGR3B
RPS29
BCAR3
TAF12
NEMF
TTI2
PLXDC1
DHRS3
MTRNR2L8
ZNF184
FRG2
TBL1X
ABLIM3
CASC3
PXK
PPEF1
RS1
POLDIP3
MDM4
UBC
MED16
MAMDC2
DDIT4
TMEM242
TPCN1
NCOA7
CSRNP1
MACC1
ZNF827
CCDC136
OPN1SW
COL23A1
FAM227B
DTWD1
BZW2
ANKMY2
MYNN
ACTRT3
PHRF1
OSGIN1
TIA1
PCYOX1
STX16
GTF2H2C_2
GTF2H2
TMEM107
RBFOX2
SELENOH
INTS12
GSTCD
PRKCE
BCL2L1
LOC102724770
DGCR6
GTPBP6
HES7
ALOXE3
TLR4
OR1F1
ZNF839
ZSCAN22
GBA
SERPINE1
MYC
HMGB1
USPL1
ALOX5AP
YARS1
S100PBP
FIGNL1
ZNF219
TMEM253
SIRT4
KLRC3
SNAI2
FRA10AC1
PHLDB2
PLD1
TMEM248
NME1-NME2
NME1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
IARS1
SYS1
ATXN2L
MAP3K20
EPB41
ANP32E
UBE2H
MAT2A
WNT9A
IER3
FLOT1
STX18
PSCA
FZD2
MRPS31
H4C12
H4C11
H2BC15
H2AC15
PTPN21
URGCP
IL1R1
UBE2D4
EPN1
CDKN1C
ADAMTS9
ARHGDIA
P4HB
RBBP5
PTPRE
MNAT1
SETD7
MRPL40
HIRA
LASP1
RPL37
CARD6
NFIL3
GADD45A
NFE2L2
F2RL3
BHLHE40
ZBTB45
SLC27A5
GTF2H2C
EIF4A3
TRIAP1
COX6A1
SLC44A1
ZNF207
C17orf75
IKBKG
CCN5
JUNB
AAR2
RPGR
ANGPTL4
CCL20
GABARAPL1
ABT1
KRT6A
SLC19A2
USP17L21
USP17L20
USP17L12
USP17L22
KLF7
FRMD3
UCHL5
RO60
CARD16
CCND3
MOGS
OR2T1
MRPL53
DNAJC19
TAF8
WSB2
LRRC59
MECOM
PUS1
TRIB1
TRIB3
ARIH1
FAN1
METTL15
KIF18A
P3H1
FIBCD1
PSMF1
ISLR2
TAMM41
NUF2
ABHD17A
INO80C
LEMD2
CPEB3
CCNL1
RPL26
KRBA2
GTF3C3
C2orf66
CCDC80
BTN3A2
H3C4
H4C5
H2BC7
H2AC7
ARID1A
RANBP2
DTNA
HES1
MIDEAS
WDR36
MCIDAS
CCNO
RPS7
FAM180B
NDUFS3
KBTBD4
KLF9
ROS1
MKRN3
STUB1
CCAR2
C8orf58
WDR24
JMJD8
TMEM167B
B4GALT1
FUS
H1-2
EGFR
PLAT
DDX53
TACO1
SAR1B
SOD2
CREB5
ESYT1
ZC3H10
RPL41
VEGFA
ATF3
MRPL17
PTPN6
C12orf57
AP3S2
OR6S1
TIMM44
HIF3A
EIF4G2
TOB2
ARHGEF12
MRPL21
IGHMBP2
DEF6
TLCD5
TBC1D16
DPAGT1
H2AX
HMBS
COMMD1
LOXL2
H3C8
H2BC10
VWA7
TPM2
STAT3
HAL
CFLAR
FAM43A
PPL
PARP16
OPA1
GRAMD1C
OR14K1
OR14A2
SCHIP1
ABCG1
MDGA1
MYBPC3
NLRX1
ZNF142
BCS1L
SEC13
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
SLCO2A1
IRF2BP2
TRIOBP
JUN
FEM1C
SLC17A3
RPA3
BCL3
FAM107B
SRSF2
MFSD11
FKBP5
BSPRY
SYCE2
RPL22
RNF207
TMEM262
SRSF6
STAU1
MRPL44
BDKRB1
DDX27
NOP53
COX16
LPIN3
LY6K
SOAT2
IGFBP6
WTAP
LRRC37A3
CST6
EIF1AD
BANF1
TBC1D19
RICTOR
SLTM
GPC1
HPD
ARMC12
PSMD9
POLR2C
ATP1B3
MRPS14
ISLR
CITED2
TRAF7
RAB26
SCNN1A
LTBR
ACSL1
PLIN3
SLFN5
HNRNPD
FEM1B
AQR
ID2
DRAP1
C11orf68
SSNA1
ANAPC2
UBE2V1
ADNP
GLIPR1L1
CAPS2
MAP2K2
FAM228B
NUP50
SF3B6
CSRP1
TP53I3
BTG1
TES
TNFRSF10B
TCAF2
THUMPD1
PTPRM
KDM6B
RIN3
DST
BEND6
TPK1
DPYSL2
PYGB
PARL
NUP107
SOD1
NDUFS4
LRRC2
TNIP1
FTH1
ATP1A2
BEST1
TSHZ2
FUCA1
GPR55
PDXK
RAB27B
MAML3
POFUT2
RPL22L1
MTREX
DHX29
CELSR1
TSPAN4
POLR2L
SRRM3
MAP4
GGA2
EPRS1
YBEY
MCM3AP
GLIS3
RPL27A
FANCI
DDX47
PRR5L
SCNN1G
ITGB3BP
EFCAB7
SLC5A1
CTIF
PDE4DIP
MPHOSPH10
MCEE
NECAP2
POLR2H
INTS6
THPO
CHRD
MTF2
NDRG1
SLC24A1
INTS14
TNPO1
BCL9L
CFAP45
PAFAH2
KRT80
HEG1
CAMK2D
SMAD3
PCLAF
TRIP4
PEX3
ADAT2
SF3A3
ETS2
NDUFAF3
IMPDH2
DALRD3
ACBD4
SSRP1
P2RX3
PLCD3
CALM2
SLC35A3
CDPF1
DCP1A
CYB561
ZNHIT6
NPIPB9
PHC2
RAD54L2
CTNNB1
MRPL39
KIF2C
RSRP1
PHACTR4
RPRD1A
SERPINB2
LIMS1
MKNK2
IKZF3
ZNF460
ART4
IKZF5
ACADSB
PTPRJ
CDK6
CCDC88B
THAP9
SEC31A
TAF10
TTC4
TPP1
RRP8
ILK
TMSB4X
PDE4D
COPS8
CLUAP1
C16orf90
OSBPL8
H4C4
PBLD
HNRNPH3
B2M
H2BC6
NEBL
TRAM1
VAMP2
PER1
HSP90AB1
SIAH1
POLR3B
NUP54
LIPM
ZNF705G
KAZALD1
RTN4
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
NAA80
HYAL3
IFRD2
GYPC
GARS1
HYAL1
ZSCAN9
SELENOW
ITIH5
SPSB1
BCAR1
H2BC14
H2AC14
S100A2
SUMF2
GOSR1
SLC27A4
UBTD1
MMS19
THSD1
RPS2
RNF151
PTPRH
UNC45B
NLE1
GPN3
FAM216A
HPS5
GTF2H1
NUDT9
JRK
RPL3L
NDUFB10
IL1A
ADK
ICMT
HES3
ACYP1
ZC2HC1C
NQO2
PROC
STMN3
RTEL1
TSEN15
DSTYK
E2F7
IGF2BP2
PRKAG2
CEP120
SLC33A1
NXT1
ASH1L
GZF1
R3HDM2
INHBC
MRI1
C19orf53
YPEL2
NDUFA12
ETV1
EREG
HOXA3
HOXA2
PECAM1
USP30
DUS2
DPEP2NB
DDX28
SURF6
NMT2
LIMS4
LIMS3
PPP1R1B
NR1H3
ACP2
KDM2A
HES4
TRIP11
AHCY
LPP
CCNC
HEXIM1
TMEM190
TMEM238
RPL28
TOMM5
NSUN4
ENPP3
RCC2
RAD50
TGIF1
ASNS
MED23
CAMKK2
TRMO
FAM160B1
CRYAA2
CRYAA
H2BC5
H1-4
TMX4
FAM126A
CFAP410
MUC5AC
LSG1
SRSF4
MOK
RPTN
EXOC2
KANSL3
FER1L5
IRF2BPL
ZC3H6
LSM12
G6PC3
GPAT3
USP38
SEC14L1
TFPI
CETN3
USP48
DR1
FOXJ3
RIPOR3
CEMP1
KRT8
PDPK1
GABARAP
TM2D1
DYNC1H1
PHF23
DVL2
SPRED2
TEDC1
CRIP1
SLC38A2
VPS33A
NT5C
CRIP2
IL4I1
NUP62
ATF5
TMC1
CCND1
H4C3
H1-6
TOX2
ZWILCH
SNAPC5
RPL4
CAMK2N1
PPM1A
KLHL20
TAS2R60
FTL
DMAP1
TBC1D9
MGST1
GPAM
DYNLRB1
CEP112
WDR11
MTERF1
ERCC1
NMNAT1
LZIC
DPY19L4
HACL1
BTD
FBXO4
SRSF7
SREK1IP1
CWC27
UBAC1
TUT1
MTA2
MRPL22
GEMIN5
BIRC3
ZMPSTE24
FBXL5
ZNF843
AXL
STK17B
DCAF10
MRPS16
DNAJC9
ARL14EP
INA
PPA2
AARSD1
KPNB1
ARID5B
ZNF696
FUT8
FOXJ2
SMS
NUDT16
MTIF2
PFKFB3
EIF3F
TFAM
RNF121
LOC100133315
ACSL4
SLC25A10
MRPL12
DBNL
NABP1
RPS15
SLC38A1
GTF2A1
TMEM268
ARID3B
ABHD14B
ABHD14A-ACY1
ABHD14A
C12orf65
PCBP4
ACY1
ZNF385B
NFKBIZ
SUCLG2
PCCB
KLRK1
CTNNA3
PPP1R35
ANK2
SEC22B
CCDC59
HTR5A
ZCWPW1
MEPCE
GATD3B
GATD3A
RAG1
ZNFX1
EIF3B
SAMSN1
TMSB10
NCAPG
CLIP4
TRAF6
CXCL8
DCDC1
DNAJC24
LPIN1
POLR2J3
STRA6
R3HCC1
CRYBG1
SSBP2
PCID2
CUL4A
SNRPD1
EXOSC6
RPL12
LRSAM1
NAT10
SMG7
SLC7A2
RBM28
SCYL3
SNX18
SLC7A11
DYM
SLC22A5
IFTAP
RAG2
ZG16B
ZXDC
MT2A
TEX46
KDM1A
SLC35F6
NDUFC2-KCTD14
NDUFC2
COMMD2
SCFD1
HMG20B
SLC22A15
SVIL
NFKB1
GIPC3
IFI16
RAB5IF
ZFP36L1
EIF2D
MAP3K8
SLC16A7
FLYWCH1
IL1RAP
SRSF1
GIPC1
TSPO
MCAT
NPAS4
TM4SF1
C2CD2
TRMU
GABRE
SMCO2
C2orf42
HEXB
CAAP1
TBC1D4
SRP14
FGD4
EIF4EBP1
VRK2
CHPT1
MTSS2
GPATCH1
XCR1
SYT5
SMIM3
SLC25A51
NREP
ZNF292
RBCK1
MRPS2
C9orf116
APTX
DNAJA1
LRRC57
HAUS2
HIP1R
CPNE8
ARID2
PARP2
CCNB1IP1
OXSM
NGLY1
SOS1
C6orf62
EDC4
RAB18
FAT4
VSNL1
RAD51AP2
RPL32
SLC35E2A
MAP1LC3B2
SPOP
PDE11A
CIAO3
RBM45
C17orf78
TMEM235
KMT2E
RTP3
MTMR2
LTF
ASPG
ALG10
SLC7A4
PKM
STN1
DDX1
CUEDC1
ETFDH
C4orf46
FNTA
ELF2
SNX17
EIF2B4
MDP1
CHMP4A
GPR19
MOB4
SOST
PUM2
BRIX1
MBP
SMARCD3
ETS1
NOL7
MEF2C
FAM184A
RBM18
MRRF
SLC39A1
CRTC2
CDC14B
CREB3L4
ADAD2
C1orf198
PRPF39
ERRFI1
HUS1
ZNF414
TSSC4
RFFL
TARDBP
U2SURP
BLOC1S6
AGK
COX7A2
CCDC174
GPBP1
SLC1A5
PMPCA
ENTR1
TTC26
POR
MRPL3
G3BP1
FAM162A
CCDC58
PRDM1
MEIS1
CDK5RAP1
SEC24A
DLX2
STK40
NDUFS5
INTS4
SPAAR
HRCT1
FBXW11
TOR1AIP2
TOR1AIP1
ADAM12
C1QTNF1
DLX1
TMEM184A
HTRA1
CHD1L
CPE
PRKAB2
PLA2G6
USP8
MRPL58
CTSB
UFL1
NUP153
PADI1
EMP1
WDR13
ZNF221
RAPGEF1
CERS2
ANXA9
TAB1