ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2635936 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◣ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NPAS4
XKR7
IQSEC3
PLA2G2A
SLC45A4
CYP26A1
INSM2
DNAJB3
LIN28A
MFSD10
THOP1
SGTA
RHOQ
ATP6V1E2
ZNF564
ZNF775
SLC6A12
PYGL
FAM24A
NBEAL2
CCDC12
ELL
UACA
AIFM2
KCNH7
UGT1A1
ABCC10
ARID3B
ANKS4B
ASB2
ATP2B2
CCL16
CCL14
GLRA1
KRT39
ELOVL5
PLGLB2
PLGLB1
LIPE
TTC6
FOXA1
NKX1-1
DHRS3
ARAP1
BACE1
VSIR
TRIM26
CCDC38
AMDHD1
ARRDC2
UBE2F
NFE2
NAT8
HOXA1
DUSP9
FGG
ZSWIM1
SPATA25
NEURL2
CTSA
RPL22
RNF207
DPP9
PHETA1
TLCD4
TLCD4-RWDD3
DONSON
TRAF7
RAB26
KCNN4
HTR5A
IRF2
SLC39A7
RXRB
HSD17B8
COL11A2
RING1
COL5A3
SH3YL1
ACP1
CCR6
NINJ2
BHLHE40
ZGPAT
ARFRP1
CARD14
NUBP1
CSF3R
PDE12
SMIM17
NEU4
FURIN
RARA
TCP10L
CCDC65
LCK
FAM167B
SPOCK2
GPC6
NINL
WSB2
RARB
NANOGP8
AGPAT3
SPINK1
ERCC1
ADAP1
SERPINF2
ARL8A
SMIM11B
SMIM11A
KCNE2
FST
SQSTM1
COL18A1
DAGLB
MRPL20
CCNL2
KLHDC2
H2BU1
H2AW
ZFP36
PLEKHG2
MUS81
CFL1
SCGB2A2
ZCCHC14
A2M
FOXA3
HAUS5
RAC1
BMP4
RHBG
UGT2A3
SREBF1
CP
CELSR3
RNF144A
TRPM1
RGS3
TRIM46
KRTCAP2
PCGF1
LBX2
L1CAM
SOCS2
RHBDD1
IRS1
NEK10
CPLX2
DACT2
ITGAV
CRLS1
TMEM86A
ANKRD28
TMEM270
SMIM22
ROGDI
CDK3
IL27
TNFAIP2
SLC30A4
PPP1R35
DCDC2
INHBE
GLI1
FGA
CTSW
EFEMP2
TMC7
EGFL7
FRYL
CSNK1D
STRN3
AP4S1
IRF9
RAB37
HOXA3
HOXA4
HOXA5
FILIP1L
CMSS1
ZC3H18
CEMIP2
POR
ETV4
MOB3A
IZUMO4
SMAD3
TRIM44
ST6GALNAC6
GPRC5C
CAPNS2
NDUFV2
IAPP
GPCPD1
TMEM80
DEAF1
EPS8L2
ATG16L1
E4F1
DNASE1L2
PLEKHF2
EXOSC4
OPLAH
TF
MACROH2A1
LYST
HAL
OSGIN1
HPD
PLEKHA7
EPHA10
ARHGEF28
DNAH1
EMC3
SOAT2
IGFBP6
ZFAND2A
DAPK1
LRP5L
NSMCE1
NPAS2
TET2
PECAM1
FAM107B
FASTKD1
ABCA4
BHLHA15
PTK2B
LAMP1
ECE1
JAK1
GPAT4
TMEM169
PECR
PNPLA3
LNX1
BRCA1
AGT
PDE4D
TRIB3
ZNF367
SDSL
FGB
PLRG1
ITGAE
CBSL
CBS
NR1H3
ACP2
PC
PIWIL2
NEDD9
C4BPB
CST5
ERRFI1
CAPG
SH2D6
SPAG9
ADSS1
COG1
PAQR8
TRIB1
GGT1
LRRC75B
ADGRG3
TMTC4
OARD1
NFYA
CX3CL1
GDF15
NHLRC4
PRR35
SEMA7A
PON2
CXADR
RCBTB1
PSPN
ALKBH7
SORL1
PCK1
APOC2
APOC4
MBL2
IDH2
ALDH4A1
PRM3
PRM2
PRM1
APOC1
SPCS1
GLT8D1
RAB17
CLDN16
MAPK8IP2
MIXL1
PPP6R3
BCL11B
TRMT61A
CKB
ATP1B1
FARP1
SOX9
RNF113B
CYP3A7-CYP3A51P
CYP3A7
TIGD2
MAST1
RTBDN
BARHL1
MINDY2
GRAPL
SH2B1
GPT2
NR2F6
DUSP1
TCIM
SPATA2L
MBNL3
SLC51B
MLLT6
RIPOR3
TLR10
POLR3H
LEKR1
PCIF1
MLEC
NR1I3
HPCAL1
INPP5D
HNF4A
PRKAG2
MIPOL1
NKPD1
NDUFS7
RASSF6
GPR20
ABCD3
OTUD7B
PAH
USP48
CAT
PIGV
F2
HNRNPAB
GMCL2
ZNF22
NIN
OMP
RCC2
TMEM37
IL1RL2
ARFGEF2
SHFL
MEIOB
ERICH5
TRIM74
TRIM73
LMNA
MEX3A
TOPBP1
RARRES1
ACTL7A
ETF1
APOB
ASB13
AMBP
RASGRF1
NRSN2
NOL7
TDRD9
ATP5MPL
AKAP1
LARGE1
SLC7A2
ERN2
EPHX1
SRC
CRLF1
TMEM59L
FRMD5
RAB42
GSN
LRRC20
SYNJ2
SLC13A3
CLNS1A
SLC2A8
SHPK
CTNS
TMPRSS3
RCL1
MCUR1
MPC1
LEPROTL1
KRTAP5-6
SLC4A3
TRIM24
XKR9
LACTB2
SCYL1
IER3
FLOT1
MTRNR2L2
MSH3
DHFR
SERPINE1
TMEM8B
FAM221B
ITIH2
SLC50A1
EFNA1
PTPN23
SEPTIN9
NBPF1
BEAN1
ERBB3
ANGPTL4
TACC1
SLC25A51
ARHGAP40
PRR15L
TOP2B
GRAP
C1orf115
ATP6V1G1
SLC12A5
AGPAT2
MMP9
ZNF181
RNF103-CHMP3
RMND5A
RASAL3
ID1
SPRED2
NTAN1
MRPL33
PRCD
CYGB
CPS1
FBXO31
MAP1LC3B
CYP3A5
TCOF1
NQO2
PGAP3
ERBB2
ATP13A3
NRCAM
BAIAP2
SLCO4A1
CHGB
CADM3
UAP1
KDM6B
NME4
DECR2
CPNE7
NRL
DCAF11
ATP2C2
CHN2
CPVL
SRCIN1
CPB2
KAZN
ITPK1
CST3
STAT5B
RBFOX2
SERPINB9
SLC20A1
C9orf152
TMIGD1
SECTM1
ACSL4
DIDO1
MRPS28
AXIN2
C3
AUNIP
RBKS
BABAM2
MARCHF3
SSBP4
DLGAP3
SNAP25
PRIMA1
KRT8
G6PC
P2RY11
EIF3G
PPAN-P2RY11
PPAN
NOL4L
NCS1
BCL2L1
ETFB
RIN3
NPPA
PHF21A
APOC3
APOA1
APOA4
TUBGCP3
TMEM88B
VWA1
RRBP1
ADCY9
BANF2
SLC10A1
CERK
SIRT1
REXO1
KLF16
HCRT
KCNH4
PHF8
TGM2
NTMT1
MOGAT3
MYH4
TLE1
NIPSNAP1
PPP1R14A
ACTR3C
NEK4
ITIH1
NAGLU
VPS13A
CALML3
SLC47A1
APOE
SST
HS6ST1
RASSF5
ITLN2
SMARCD2
NR1H4
COL21A1
COPS8
ECI2
LSM14A
TM4SF19
PFKFB1
APEX2
MRPS24
SLC4A11
SLC25A47
CHKA
PSMD1
ZNRF3
MLXIPL
FSTL3
COMT
TGFBR2
SSTR5
SHB
MTUS1
NDST1
TNFSF4
BCAR1
PLTP
THUMPD3
KPNA2
H2BC17
H2AC17
H3C12
AHDC1
PPP1R18
NRM
MSANTD3-TMEFF1
UBAP2
LRMDA
EIF1B
COG2
SLC29A4
ZNF343
ANGPTL8
MIDN
ATP5F1D
CBARP
TBL2
PIM1
CDH1
TANK
SPG7
MTRNR2L1
C3orf86
RTN4
SNX33
NR0B2
ZKSCAN1
PPCDC
SAMHD1
LDLR
SEPHS2
BPIFA3
KRTAP10-12
TMCO6
CYB5R4
RIPPLY2
NDUFA2
IK
CD14
BDH1
PRAC2
HOXB13
FABP1
LRRC27
C11orf86
CDC42BPA
EDARADD
NFYB
SPHK2
DBP
KLF3
ZNF503
TRNP1
GFOD2
LRP11
SEMA4G
HSPA4
HIVEP2
OTUB1
COX8A
SH3PXD2A
SOCS3
IL17F
FOXP4
FAM20A
IGFBP4
PACSIN3
ALAD
ARFGAP2
FETUB
ACOX2
IL6R
PEBP1
DDB2
ZBTB45
SLC27A5
HERC5
HSPA1L
HSPA1A
LSM2
H4C3
H1-6
GRAMD1A
ASAP2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
CELF1
PTPMT1
VWA5B2
SEBOX
ABCC6
NOMO3
NOMO2
RNGTT
SARM1
VTN
TMEM9
BCL3
SCN1B
HPN
RBP5
CLSTN3
APEH
UHRF1
ARRDC5
RPGRIP1
KCMF1
LASP1
ZSCAN2
TRIM25
LHPP
LRRC69
INPP1
CTNNA1
CDV3
LTO1
NAPB
HNMT
TGOLN2
KAT6B
SYNPO
EAPP
IL1R1
SERINC2
ZNF7
SERPINA11
STX1A
RGN
SCIMP
KIZ
NCOR1
TARS1
SDC1
DGCR8
RAB4A
GIP
EBF4
SCAP
PROC
TMED5
CCDC18
WNK4
VPS25
IL6ST
PCK2
ADGRG6
PIGS
ALDOC
SUMF1
LDLRAD1
SLC35E2B
SMG1
TST
MPST
BCL6
SRSF6
ZNF101
ATP13A1
CLDN1
ORMDL3
GSDMB
MRPS31
ROBO3
PDE6G
TRIM11
C1RL
FBXO25
SLCO2B1
NDUFS5
JUNB
HOOK2
RAB5IF
LOC102724265
CA5A
DLC1
OR1F1
TGFB3
IFT43
CEP250
MRPS11
MRPL46
PLIN2
NFKBIA
KLRC3
TM4SF1
SYTL3
CCDC57
TSC2
NTHL1
SLC9A3R2
PSD4
ZNF497
A1BG
EPAS1
TOP1MT
SEC23A
CS
MYO1B
SLC26A9
SERPINF1
ZMIZ1
NANP
VAMP8
VAMP5
MAOB
L3MBTL4
CPT1A
LDLRAD4
IFT52
PRUNE1
MINDY1
CAPRIN2
FAXDC2
STAT6
SLC43A2
ANKRD39
SEMA4C
AGMAT
SPDYE6
LOC100289561
RCAN1
TRIM17
H3-4
HDAC11
SLC6A9
OTUD4
STK24
CCS
CCDC87
SPNS2
AP1M1
PLIN4
NOTUM
ACSS1
ASPSCR1
HBA2
HBM
PLIN5
LRG1
LHFPL5
CLPS
TCIRG1
NDUFS8
NDUFS1
EEF1B2
BCKDK
KPNA7
CCL15
CCDC197
TCP11L2
ADAMTS16
KIAA0232
SLC35F6
TTC39C
ARHGAP18
CA1
SALL4
LONRF3
PELATON
ZDHHC19
SLC51A
NEU1
TRIM47
ABL2
CDC42EP1
ROCK2
G0S2
RGS19
OPRL1
LKAAEAR1
C6orf136
MGST2
BCL2L10
CCL5
MYOM3
CNPY3
SLC16A5
PTCRA
ST18
RABGAP1L
SLC38A3
UGT2B10
NIPSNAP2
MRPS17
SLC7A13
CHCHD10
ITGB5
SLC25A15
CYBA
MIDEAS
RPLP1
TSPAN4
POLR2L
CORO1A
LRCOL1
LGR5
PDK4
CNDP1
GPR171
NGEF
CMIP
RAB35
MRPL2
KLC4
CUL7
PKP4
CCDC148
CCL20
C3orf20
ADGRA1
OPTN
CCDC3
FANCA
NPM2
SPIRE2
DSP
SDC4
SULT2B1
CRYBG2
NR5A2
MLANA
CHD1L
USP2
BORCS7
FMO5
C6orf47
APOM
BAG6
GPANK1
CSNK2B
ECH1
MTRNR2L8
SDF4
B3GALT6
C1QTNF12
XRCC4
TMEM167A
PTP4A1
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
LRRC45
CENPX
CHST13
UROC1
SEC14L4
GSTP1
IDNK
FRMD3
PARP9
DTX3L
SPATC1
ABAT
CCR7
ZNF23
ATP8B1
NKD1
TMEM53
ARMH1
SERPINA6
F5
DHRS4
DHRS4L2
RBSN
AFP
AKTIP
GOLM1
LOC644090
CES1
SRP14
MIA2
KANSL3
FER1L5
MRAP2
ITGB2
CYHR1
FUT1
FGF21
BMF
DIPK1A
WDR90
TMEM181
AGO2
TCAF1
IFIT1B
REN
SYCE3
SOWAHD
CPE
MED9
CBR1
CLK1
ITIH3
HSPA1B
MRPL4
MYH11
WBP2
UNC13D
SUN2
C2CD4D
RORC
RNF10
COQ5
SGIP1
LRRC8E
NT5E
NUDC
RBP4
SGK2
FAM174C
EFNA2
TTI2
SERPINA12
ZBTB7C
TBX4
GNAZ
CYP19A1
URGCP
CCN2
NQO1
URGCP-MRPS24
HSBP1
ELF3
GPR42
KRT37
RPS6KB2
PTPRCAP
CEP70
CDIP1