ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584305 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◣ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NEUROG2
ZNF335
ZP4
RABL2B
MAPKAPK5
PSMD1
DUX4
IPO13
RABL2A
NME6
VEZT
FGD6
HES1
NEUROG3
RWDD1
ICMT
HES3
CACTIN
VDAC2
TAOK3
SUDS3
NUP85
ZNF503
POLR3F
DZANK1
MBTPS1
HSPA9
IGFBP2
DUSP29
RPL21
ATP5MG
DYNC1LI2
NVL
VTI1B
TBCK
AIMP1
FAM187A
EFTUD2
CCDC103
LOC102724770
DGCR6
ARHGAP10
PAK1IP1
C6orf52
DCTN1
NNAT
BLCAP
NUP205
POLR2E
GPX4
ACTR10
SRD5A1
REXO1
SKP1
CDX2
DPH6
PMAIP1
C19orf48
S1PR4
NCLN
STAM2
PSMG2
CEP76
EXOSC5
BCKDHA
UPF2
STAM
MRPS7
MIF4GD
GGA3
FRG2C
SLC35B1
PES1
PNO1
HADHB
HADHA
TSN
GOSR2
GLRA1
URM1
SUPV3L1
INSM1
RBBP5
LYRM4
FARS2
FARSB
SEC61B
ALG2
ANAPC7
WNT1
CAPRIN1
ZNF576
IRGQ
SKIL
RPL35A
IQCG
LMLN
RBKS
BABAM2
ZDHHC1
LARP7
LZTS1
PCBP1
PSMD12
TSNAX
TMED1
NHS
MRPS5
ATOH1
SART3
ISCU
GOLGA5
ZNF608
VARS1
NDUFA4
SF3B3
COG4
ICE1
COX7A2L
TTC8
ARF1
SFI1
EIF4ENIF1
PDAP1
BUD31
PAF1
RPS12
RPS23
ATP6AP1L
SMC2
BNIP3
PI4KB
IL17RD
PIP4P1
OSGEP
APEX1
RBBP7
MALRD1
GADD45G
PANK4
HES5
USP1
ZRANB2
HOXA3
HOXA4
NAV3
TM9SF1
IPO4
TSSK4
NEUROG1
LEFTY2
HSPA1B
DUSP6
TTYH1
KDM8
FAM104A
C17orf80
PPP1R1B
TESC
RPS27A
CLHC1
SELENOF
HS2ST1
CERCAM
NFKBIL1
DDX39B
ATP6V1G2
CCDC33
UFM1
DNAJB7
XPNPEP3
ST13
PRRX1
G6PC2
SERINC5
UBE2I
FAM222A
PAX6
ADK
AP3M1
FZD8
RPS29
LRR1
ST18
B3GALT5
PTGES2
CPSF4L
NRXN2
RABGGTB
PLAGL1
DLL4
PHOX2B
PROSER1
NHLRC3
PDHB
ETS1
CR1L
HOXB1
NEUROD1
HOXB3
HOXB4
TMEM212
ADNP2
ASXL3
FRG2
BICRA
HHIP
OR10AC1
C6orf47
APOM
BAG6
PNKD
NCOA7
RASL10B
TLE2
ITGB6
LHPP
HNRNPA2B1
CBX3
RAB11FIP1
PIN4
TRABD2B
SULF1
FKBP1A
NOXO1
SYNGR3
GFER
TAF9
RAD17
AK6
GTF3A
CNTN1
NUTM2D
NEDD9
ERRFI1
RYBP
STRA6
PDPN
SLC10A2
PDE6B
MRTO4
EMC1
DDX3X
SEC11C
UNCX
GUCY1A1
MYRIP
PSMB5
OPLAH
SOX12
RGS12
HOXD3
HOXD4
EPHA5
TMEM120B
DLX4
STK36
RNF25
CSRNP1
CBFA2T2
ARHGAP11A-SCG5
ARHGAP11A
RIMKLB
NEK3
PAH
KAZALD1
ASCL1
OR6B2
NDUFA10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
PRUNE2
BFSP1
ME3
LIMCH1
METTL11B
NR2F1
COMMD1
CCT4
RHBDD3
EWSR1
GADD45GIP1
KDM2B
LRATD2
SCGB1A1
ZFX
BANK1
CNTN4
HES7
ALOXE3
RPN1
PDHX
APIP
TPRA1
MCM2
FJX1
CDCA7
TTLL6
KRT16
SCARB1
TLE4
LPIN1
HNF1A
OTX1
GFRA3
CACNA1D
RPH3A
EIF2S3
SYBU
TIGD1
EIF4E2
ABCB5
SCARF2
COL17A1
SPACA1
TMEM107
KIF26A
RAI14
PCBD2
ZGPAT
ARFRP1
OAZ3
MRPL9
BRWD1
WDR59
CNPY2
UPF3A
LRIG1
CLGN
GDNF
SOX11
RPL7
RDH10
SUCLG1
MBNL3
CRYAA2
CRYAA
ANKLE2
PDGFA
KCNN4
TCF7L2
LBX1
SOCS3
REV3L
PPP1R1A
CLDN2
MDFIC
HOXA2
LAMA4
CDC73
DMBX1
RARA
AXDND1
GPR20
HNRNPD
PKNOX2
ARID3C
DCTN3
CALCOCO1
ECEL1
REC8
C6orf132
WBP1L
TBC1D8
MAFA
ZMAT4
TNC
SALL1
CLMP
GTF3C4
DDX31
DDAH1
CCN1
EHF
DHRS3
ZNF585B
ZNF383
BAHCC1
ERLIN2
NID1
CAMTA1
PDE12
CXCL12
CCDC200
HOXB8
HOXB7
HOXB6
FXYD2
NOTCH2
DSCAML1
ECM1
HOXA1
AQP6
DBX1
SNAPC1
CATSPERG
LIN28B
TMSB15B
CDX1
GORAB
BAIAP2
FGFR4
TPH2
MSX2
IRX5
ZNF214
NLRP14
ALDH1A2
MAST2
XIAP
SLC45A3
VOPP1
C15orf61
CPN2
RADIL
ANK2
PPM1B
SLC39A6
PRDM12
DIPK1B
AMD1
ZADH2
TSHZ1
KIF21B
GPR176
RBPJ
METTL24
NFILZ
FAM214B
STOML2
PIGO
ADAMTS15
C8orf34
CD99L2
H2BU1
H2AW
TMEM131L
LRRC4
CDH18
USP17L21
USP17L20
USP17L12
USP17L22
LIG3
ZNF703
TMPPE
GLB1
FOXB1
CDC42EP2
BAZ2B
CD82
CYP26A1
PACSIN2
TRIM56
PIPOX
ZSWIM6
CADM3
QPRT
LOXL4
ZNF746
ID2
TPM1
GAD2
KDM6B
ABLIM3
KLF17
FABP7
MYLK4
CPLX1
SCN5A
EBF3
OR8J1
DHX32
HMGN1
TBX3
RFX2
CUEDC1
POU3F2
HOXA5
SOX21
HOXA6
TEAD1
LRRC15
RPL24
FAM107A
DST
RPS10-NUDT3
RPS10
RPS24
POLR3A
SCARF1
RILP
ZFP36L2
SLC22A2
FOXA2
FABP5
LZTFL1
DEFA5
ONECUT2
FGF19
CEMP1
PDPK1
HNRNPA3
ERCC1
PFKP
ADO
TEX30
SYNE4
LOC101927572
ALKBH6
CHN2
CPVL
LINGO1
EIF4H
KLHDC8A
SLC7A5
ALKBH5
MSX1
SOX6
MTCH2
RNF138
FBLN1
HSPA1L
HSPA1A
JAKMIP1
LHX2
ZFHX4
NAV2
ADGRL2
DTX4
ACSS3
SMC6
GEN1
PPP1R35
NEBL
ZCWPW1
MEPCE
TRAP1
TBL1XR1
OTOF
FAM166C
YAP1
EIF2S1
ATP6V1D
SPCS1
GLT8D1
ARHGAP24
METRN
ANTKMT
SALL4
CCDC78
ZNF775
KIAA0895
MSI1
KLF6
MUC20
RUNX1T1
GREB1
FAM171A2
TLE1
ID3
GZMK
PHC2
SPOCK2
KCNIP4
HOOK2
KMT2A
HOXA7
PAX3
CST6
EFNA5
CATSPER1
ITPRIP
CYP51A1
FRMD7
H3-3A
KMT2B
NUP210
TDG
C12orf73
PPP2R5A
C6orf226
TPST2
DAAM1
C8B
STMN1
MEX3B
ADAMTS18
OLFML2A
NR6A1
KRT20
RPRM
BBS9
TLE3
HEY1
CNKSR3
LDHB
HOXC4
MUSTN1
ITIH4
PIGR
KLHL15
MEIS3
EBF2
DAPL1
STK38
DHRS4L1
HSPB8
C5orf63
CASC3
LEMD2
CLDN11
SRGAP3
THEMIS
RHBDL3
PPFIBP2
SEMA6D
EIF4E3
SNCG
MMRN2
KEAP1
TMA16
PON2
NMNAT2
DNAJC25-GNG10
DNAJC25
ZFHX2
HOXD1
TUBB3
MC1R
TGFBI
TFDP2
PAX4
FEZF2
ACOT2
CA4
ADM
CS
HOXC6
HOXC5
LRRC10B
MEF2C
SERPING1
TPCN1
FGF2
CCBE1
TMEM70
ELOC
FBXO10
MEIS2
ALOX5AP
GNAI1
TMEM14A
PCDH11Y
TCF20
IL37
SRSF11
LRRC40
PARP16
TANC1
ENO1
USP17L13
USP17L11
USP17L18
USP17L10
HOXB9
CER1
RARB
LIN28A
NKIRAS1
NR1D2
LAPTM4A
TAGLN3
IFI16
PYDC5
MNT
TCF4
R3HDM4
CEP97
MEOX1
FABP9
RPL17-C18orf32
RPL17
ATP1A4
ZFHX3
TYRO3
HOXA9
MARCHF7
TP53I11
FOXP1
SP5
SPG7
PCBP4
RFX3
GPR62
C1orf141
BNIP2
USH1C
OTOG
ME2
IFNA21
PANK2
ELMO1
PCDH18
RGS16
LDLRAD3
CSTF2T
SEMA4B
IP6K3
ERI1
OLFM2
HRK
PLEKHA6
LYPD6B
LCA5
SCN2A
MRPL3
FOXD1
N4BP3
BTF3
EOMES
CRTAM
SEMA4F
M1AP
ABAT
NUTM2F
STARD13
GAS8
NELFA
GPR157
SLC25A33
TTC13
RBP1
PJA2
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
ID1
SOAT2
IGFBP6
SP2
EAPP
ARID3B
SPATC1L
UNKL
NFE2
C16orf91
IER3
FLOT1
PALM2AKAP2
NDUFS7
ZSWIM1
SPATA25
NEURL2
SH2B1
KAT6B
DPP9
TBL2
CTSA
USP29
GPR108
BHLHE40
TRIM65
PCGF1
TRIP10
MRPL38
LBX2
VSIR
WDR74
STX5
MAMDC2
TTI2
ARHGDIA
ASB2
P4HB
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
TAF12
DNM2
MLEC
CITED2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
COL23A1
S100A10
FBXO31
NPAS4
MINDY2
HPD
TNFRSF19
MAP1LC3B
HUS1
SYTL3
CRABP2
PPP6R3
FILIP1L
ANKRD28
H2BC17
H2AC17
COL11A2
SYNPO
PDE4D
EXOC2
XKR7
FRA10AC1
RPL22
RNF207
RAB5B
PMEL
CDK2
HPCAL1
E4F1
SMAD3
CCNDBP1
MRPL34
DDA1
ABHD8
PKDCC
NFIA
BAZ2A
STX18
ARHGEF28
FRYL
STAP2
KANSL3
FER1L5
OTUD7B
ARSG
TMEM242
VIP
DYNLT1
DONSON
DOLPP1
GPC6
ARRDC4
ASB6
PDZRN3
PGK1
ATP5F1B
SEPTIN9
ATF6
MAB21L2
ETAA1
FOXP2
POR
CERK
POP5
SIRT4
EXOSC4
SH3BP2
JUP
MFSD10
SMPDL3A
ARHGAP22
MRPL20
PPCDC
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
PTK2B
SQSTM1
KCNAB2
SHC1
TMEM101
TRIB1
CCDC174
RING1
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
SMIM28
MTMR4
LFNG
TMEM9
SMG6
GATA4
ATP1A1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
C9orf92
ZNF367
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
PSPN
ALKBH7
TLX2
NOL4L
EIF1B
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
MRPS31
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
ANGPTL4
DLC1
RHOQ
ATP6V1E2
PCNA
ITGAV
RPL34
STAT1
NFKBIA
RPLP1
ARHGAP30
IQSEC3
RAB26
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DNAH1
DCAF11
ZFAND2A
PDE4DIP
TRIM26
SSBP4
ZNF740
CSAD
PXYLP1
PRDM10
CDS2
ARRDC2
OSBP
NLK
GRIK2
ATP1B1
SHF
EIF2AK3
SKI
ZNF77
STIP1
RPS7
CSF3R
HMGCS1
PSMD6
SOD2
AHDC1
SERPINE1
ART1
TCP10L
TRIM7
HAND1
RGS3
SLC25A25