ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584304 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◣ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
NEUROG2
LARP7
RABL2A
DUX4
NUP205
ZP4
POLR3F
DZANK1
PSMD1
NME6
NEUROG3
MAPKAPK5
TBCK
AIMP1
MBTPS1
NVL
HSPA9
POLR2E
GPX4
NUP85
ARHGAP10
CACTIN
IPO13
ICMT
HES3
DYNC1LI2
NNAT
BLCAP
ZNF503
PES1
RWDD1
TAOK3
SUDS3
RPL21
FARSB
LOC102724770
DGCR6
C19orf48
FAM187A
EFTUD2
CCDC103
VDAC2
GOSR2
PAK1IP1
C6orf52
MRPS7
MIF4GD
GGA3
VTI1B
S1PR4
NCLN
SART3
ISCU
ACTR10
DCTN1
PSMG2
CEP76
PNO1
PPP1R1B
SEC61B
ALG2
SF3B3
COG4
HES1
EXOSC5
BCKDHA
SUPV3L1
UFM1
SKP1
TSN
RPL35A
IQCG
LMLN
ATP5MG
PCBP1
TSNAX
PSMD12
ANAPC7
RPS27A
CLHC1
UPF2
SLC35B1
STAM2
STAM
LYRM4
FARS2
DUSP29
NHS
COX7A2L
GLRA1
REXO1
DPH6
ZNF608
SRD5A1
CDX2
ZNF576
IRGQ
ZRANB2
HADHB
HADHA
TMED1
RPS12
RBBP5
TTC8
VEZT
FGD6
HSPA1B
SELENOF
HS2ST1
PI4KB
SMC2
CAPRIN1
MRPS5
FAM104A
C17orf80
DNAJB7
XPNPEP3
ST13
WNT1
ATOH1
PAF1
PIP4P1
OSGEP
APEX1
IGFBP2
NDUFA4
RBKS
BABAM2
URM1
SERINC5
VARS1
LZTS1
SFI1
EIF4ENIF1
GADD45G
GOLGA5
INSM1
ADK
AP3M1
PMAIP1
CCDC33
FRG2C
MALRD1
PDAP1
BUD31
USP1
RPS23
ATP6AP1L
RABGGTB
ADNP2
PROSER1
NHLRC3
PTGES2
ZDHHC1
TM9SF1
IPO4
TSSK4
ICE1
NFKBIL1
DDX39B
ATP6V1G2
LEFTY2
G6PC2
NAV3
HOXA3
HOXA4
PHOX2B
IL17RD
KDM8
NEUROG1
SEC11C
BICRA
RPL7
RDH10
C6orf47
APOM
BAG6
CR1L
CERCAM
PIN4
ARF1
BNIP3
RPS29
LRR1
SUCLG1
CACNA1D
STK36
RNF25
SULF1
ST18
ARHGAP11A-SCG5
ARHGAP11A
TMEM212
ASXL3
TMEM120B
PAX6
RAB11FIP1
RFX2
ABLIM3
KRT20
FAM222A
NR2F1
COMMD1
CCT4
CDX1
TAF9
RAD17
AK6
PPP1R1A
DLL4
RHBDD3
EWSR1
OAZ3
MRPL9
FZD8
ETS1
SLC10A2
CHODL
OR6B2
NDUFA10
NEUROD1
TPM1
RIMKLB
PANK4
HES5
CLDN2
EPHA5
PAH
ASCL1
PRUNE2
TCF7L2
TTYH1
LRATD2
CPSF4L
SOAT2
IGFBP6
CNTN1
UBE2I
NCOA7
DMBX1
ARID3C
DCTN3
SALL1
UNKL
C16orf91
TPRA1
MCM2
RPN1
CDC42EP2
GADD45GIP1
NUTM2D
FRG2
GORAB
HOXB1
HOXB3
HOXB4
SCGB1A1
SMC6
GEN1
ZNF585B
ZNF383
PDE6B
MUSTN1
ITIH4
HOXD3
HOXD4
ERRFI1
RBBP7
PRRX1
TBC1D8
PSMB5
SPACA1
PDE12
WDR59
DDAH1
CCN1
SKIL
TESC
CDH18
ME3
RAI14
DLX4
GAD2
HNRNPA3
SYBU
FXYD2
DSCAML1
MRTO4
EMC1
USP29
HHIP
CCDC200
FKBP1A
FJX1
DIPK1B
TIGD1
EIF4E2
C8B
TMSB15B
ECEL1
OR10AC1
PDHB
HOXA1
HOXA2
ALKBH5
DUSP6
CNPY2
FGF19
GTF3A
HES7
ALOXE3
METTL24
PLAGL1
UNCX
KDM2B
PCBD2
NEK3
FOXA2
SALL4
AQP6
ZNF746
KIF26A
PDHX
APIP
CADM3
HNRNPA2B1
CBX3
ZFX
DEFA5
EIF2S3
RBPJ
GATA6
PTGR1
CATSPERG
OTX1
SNAPC1
HSPA1L
HSPA1A
GPR20
EVA1A
LAMA4
FAM214B
STOML2
PIGO
CBFA2T2
LHPP
KRT16
ADGRL2
COL17A1
CALCOCO1
MUC20
RPH3A
ZGPAT
ARFRP1
ASB6
REV3L
STRA6
CECR2
FABP7
TMEM107
PDPN
CDON
HOXB8
HOXB7
HOXB6
KLF17
EIF2S1
ATP6V1D
ANK2
METTL11B
NOXO1
SYNGR3
GFER
B3GALT5
GFRA3
ZADH2
TSHZ1
GTF3C4
DDX31
AXDND1
LRIG1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CYP51A1
TLE4
BFSP1
PPP2R5A
TMEM14A
MDFIC
MYO10
TTC13
CAMTA1
CLGN
GNAI1
ZFHX4
TRIM65
MRPL38
MBNL3
THRA
RPS24
POLR3A
HNF1A
VOPP1
ALDH1A2
NRXN2
FOXP1
REC8
SNCG
MMRN2
CLMP
ZNF214
NLRP14
FOXB1
H2BU1
H2AW
GNB2
ACTL6B
KLHDC8A
ID1
HOXC6
HOXC5
CXCL12
CDH16
KCNN4
NFE2
CNTN4
DHX32
KIAA0895
TMPPE
GLB1
UBR2
PPFIBP2
ADM
RARB
OPLAH
FRMD7
LRGUK
MSX1
LIG3
LBX1
P2RX6
RIPOR2
MEIS3
MEIS2
GUCY1A1
STK38
LIMCH1
DDX3X
LIN28B
PCDH11Y
SOX6
TPST2
C8orf34
NEK7
ABCB5
PAX3
TEX30
EVX1
TLE3
HOXA5
AGO1
C6orf132
HOXA6
LOXL4
PALM2AKAP2
ITGB6
LRIG3
POU3F2
LRRC4
TLN1
CREB3
ALOX5AP
DTX4
CPLX1
CPN2
CD99L2
CLDN11
DAAM1
SOX21
CSTF2T
TRABD2B
TPH2
TCF4
QPRT
FREM1
EIF4E3
PANK2
ZNF367
ADAMTS18
H2BC17
H2AC17
H3C12
TYRO3
CDCA7
RARA
KAZALD1
TMA16
SOX12
SH2D3C
BNIP2
SCARF2
RGS12
GDNF
METRN
ANTKMT
CCDC78
ARHGAP24
BRWD1
HSPB8
USP17L21
USP17L20
USP17L12
USP17L22
PLEKHA5
PJA2
C5orf63
PAX8
DHRS4L1
EFNA5
GAS1
DAPL1
TDG
C12orf73
DLG4
ACADVL
PNKD
ADO
SOCS3
TTLL6
SMARCA2
NR4A2
PRDM12
PCBP4
GPR62
CD82
THEMIS
RPS10-NUDT3
RPS10
SLC44A3
USP17L13
USP17L11
USP17L18
USP17L10
TTI2
SNX1
CIAO2A
NEDD9
FAM107A
NELFA
MSI1
MTRNR2L1
MTRNR2L2
MSH3
DHFR
MTRNR2L8
SP2
EAPP
DHRS3
ARID3B
SPATC1L
CYP26A1
ID2
CDC73
IER3
FLOT1
NDUFS7
ZSWIM1
SPATA25
NEURL2
ZNF775
SH2B1
KAT6B
DPP9
TBL2
CTSA
ERCC1
GPR108
BHLHE40
BBS9
PCGF1
TRIP10
SPCS1
GLT8D1
LBX2
VSIR
WDR74
STX5
MAMDC2
LIN28A
RUNX1T1
TBX3
ARHGDIA
PHC2
TLE2
ASB2
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
TAF12
LPIN1
DNM2
MLEC
CITED2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
ANKLE2
COL23A1
S100A10
FBXO31
NPAS4
HOXC4
MINDY2
HPD
SP5
TNFRSF19
MAP1LC3B
HUS1
SYTL3
CS
CRABP2
PPP6R3
FILIP1L
ANKRD28
COL11A2
TMEM70
ELOC
SYNPO
PDE4D
EXOC2
XKR7
FRA10AC1
RPL22
RNF207
RAB5B
PMEL
CDK2
HPCAL1
E4F1
SMAD3
KIF21B
CCNDBP1
ZFHX3
MRPL34
DDA1
ABHD8
PKDCC
NFIA
BAZ2A
STX18
ARHGEF28
CHN2
KDM6B
FRYL
TLE1
STAP2
ID3
CPVL
KANSL3
FER1L5
OTUD7B
ARSG
TMEM242
BAIAP2
VIP
DYNLT1
DONSON
DOLPP1
GPC6
ARRDC4
PDZRN3
PGK1
ATP5F1B
SEPTIN9
ATF6
MAB21L2
ETAA1
FOXP2
POR
CERK
POP5
SIRT4
EXOSC4
SH3BP2
JUP
MFSD10
UPF3A
SMPDL3A
ARHGAP22
MRPL20
PPCDC
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
PTK2B
SQSTM1
KCNAB2
SHC1
TMEM101
TRIB1
CCDC174
RING1
MYLK4
SRSF11
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
SMIM28
MTMR4
LFNG
TMEM9
SMG6
GATA4
ATP1A1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
MRPL3
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
C9orf92
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
TLX2
NOL4L
EIF1B
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
MRPS31
LRRC40
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
ANGPTL4
DLC1
RHOQ
ATP6V1E2
PCNA
ITGAV
RPL34
STAT1
CRYAA2
CRYAA
BAHCC1
NFKBIA
NOTCH2
RPLP1
ARHGAP30
IQSEC3
RAB26
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DNAH1
DCAF11
ZFAND2A
PDE4DIP
TRIM26
SSBP4
ZNF740
CSAD
PXYLP1
PRDM10
CDS2
ARRDC2
OSBP
NLK
GRIK2
ATP1B1
SHF
EIF2AK3
SKI
ZNF77
STIP1
RPS7
CSF3R
HMGCS1
PSMD6
SOD2
AHDC1
SERPINE1
STARD13
ART1
TCP10L
TRIM7
HAND1
RGS3
SLC25A25
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
SLC45A4
RAB11B
CAPG
KNL1
BRMS1
ACYP1
CAPNS2
TRIB3
GADD45A
G3BP1
ZNF564
MYBPC3
LPCAT3
KMT5A
IKBKB
NCOA2
BORCS6
EVI5L
GOT1
SPRED2
RTN4
PIPOX
MACROH2A1
CCL26
EMP3
FTL
SOCS2
ELL
SH2D6
CBX4
HNRNPD
LMO4
RBM15
STX1A
TNFAIP2
POLG
COL21A1
CTSW
SLC35E2B
FAM107B
SMIM20
PDP2
TPCN1
TCTEX1D4
SLC7A5
PLK3
BTBD19
CRLS1
ZNF827
SYNJ2
GRSF1
B4GAT1
METTL3
LMOD1
CORO1A
HTR1F
MYRIP
MTF2
MBD6
DDIT3
MIDN
RBFOX2
MNT
MYEOV
ZC2HC1C
KBTBD11
MOB3A
IZUMO4
TRIM2
MSX2
GLRX5
NEK1
CP
CLDN9
PKN2
FST
DAGLB
JUNB
GMEB2
WSB2
SLC6A12
SCHIP1
LCK
FAM167B
TMEM94
PYGL
CSNK1D
NAIF1
PLA2G2A
TUBA1C
SEC22B
CNKSR3
IFI16
ARHGEF3
UBE2F
CCDC43
SHB
ETF1
ARAP1
KDM3A
INAVA
SORL1
NCDN
KIAA0319L
PRMT5
MRPS28
EIF3D
SLC30A4
ARID5A
NKX1-1
IGFBP7
CNPY3
NKD1
MPND
UNC5A
NAV2
SH3YL1
ACP1
FLAD1
CKS1B
SLC19A1
KIAA1549
ABCA4
SH3BP1
FOXA3
PCM1
SCARB1
BCAR3
DIABLO
PPFIBP1
CMSS1
TACC1
TXNRD1
SPOCK2
LINGO1
ARID4A
SORBS2
KLF16
FGR
LMNA
ZBTB18
SIT1
H4C15
H4C14
H3C15
H3C14
NAGLU
PLEC
UBC
LRRC45
CENPX