ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662659 | Ishikawa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◣ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

TEPSIN
NDUFAF8
SPATC1L
SP2
DNM2
ARHGDIA
P4HB
STAP2
MPND
KATNB1
RAB5B
PMEL
CDK2
DOLPP1
ARRDC4
BAZ2A
ATP5F1B
ARNTL
RFX1
EIF2AK3
AP3M2
ARID4A
SP1
ZNF687
E4F1
PGP
MLST8
BRICD5
PRKACA
CNOT1
HNRNPC
EVI5L
USHBP1
BABAM1
TMEM94
STIP1
MPV17L2
GPR84
CIC
ZNF77
NLK
TOP2A
SKA2
PRR11
GOT1
OSBP
HNRNPL
PROSER3
LIN37
HSPB6
SLC39A2
METTL17
PRR14
FBRS
TRAF2
CAMTA1
PSPN
ALKBH7
TDRKH
UBE2C
GLRX5
TOM1L2
DRC3
ACTL6A
GPR108
TRIP10
RECQL
GOLT1B
KHSRP
ANKHD1-EIF4EBP3
ANKHD1
NCDN
KIAA0319L
TOMM40
SLC34A3
TUBB4B
FAM166A
STPG3
HNRNPUL1
PITPNM1
TEDC1
CRIP1
PXMP4
FDFT1
HSPA5
LRCH4
FBXO24
MSMO1
PHPT1
AJM1
MAMDC4
SLX1B
SLX1A
BOLA2B
BOLA2
CORO1A
SULT1A4
SULT1A3
RFWD3
COPZ1
G3BP1
MOGS
WBP1
INO80B
FAAP24
CEP89
TCERG1
MTMR4
SEPTIN4
LRRC45
CENPX
RAC3
SPAG7
ZSWIM4
BOLA2-SMG1P6
SNRPF
POU5F1
TCF19
CCHCR1
KAT7
KAT6B
PAN2
IL23A
HMGCS1
KDM4B
SRGAP2
FAM72A
H2AZ2
SARNP
ORMDL2
FRYL
DROSHA
C5orf22
COQ8A
MRPL34
DDA1
ABHD8
AK2
RBM15B
MANF
CNOT3
ZFYVE21
XRCC3
KCNAB2
OS9
KPNB1
SHC1
FLAD1
CKS1B
CHCHD6
ABHD2
UBALD2
NPR1
ILF2
MTMR12
MTFR2
MVD
NRL
DCAF11
RBM27
POLR2G
ZBTB3
JUP
TYK2
SLC25A25
NAIF1
HDGFL2
TMEM60
PHTF2
SLC25A42
HSP90B1
PDK2
PRPF40A
ARL6IP6
YIF1A
TMEM151A
STT3A
CNPY3
SYP
TMX2
MED19
PRICKLE3
SPSB3
MRPS34
EME2
ISOC2
ZNF691
ZNF48
TBC1D10B
MYLPF
WDR97
MAF1
CYC1
WDCP
PITX3
GBF1
CENPA
DDX39A
YJU2
XAB2
STXBP2
PCP2
RAB3A
ASF1B
GATAD2A
CNEP1R1
TMEM160
ZDHHC16
EXOSC1
ARMC1
ZNF555
DNAJC14
DERL3
ATP5MC1
GATAD2B
ZNF8
H3-3B
UNK
MSANTD4
CBX5
HNRNPA1
PWWP2A
CFAP43
CD68
EIF4A1
PAIP2B
PRRC2B
ZNF574
CENPF
DCAF7
VCP
FANCG
FAM72C
ABL1
THRA
IARS1
MED24
TSKS
AP2A1
ZNF775
RPLP0
GCN1
ARHGAP19
MMACHC
CCDC163
TESK2
NUDT2
KIF24
PI4K2A
MORN4
DDX49
COPE
NUMB
SEL1L
CLDN9
EEF1AKNMT
CGGBP1
ZNF654
LENG1
TICRR
JPT1
PODNL1
DCAF15
PIP4P1
OSGEP
APEX1
PNP
ZBTB5
TBCCD1
DNAJB11
CYTH2
PABPN1
ATG9B
ABCB8
PRADC1
CCT7
ZNF785
ZSWIM1
SPATA25
NEURL2
VAMP2
PER1
KCTD2
ATP5PD
ZBTB32
IMMP1L
ELP4
ZSWIM3
ACOT8
GOLPH3L
FAM204A
OGFOD1
NUDT21
DCUN1D4
SOD2
ACAT2
CCDC116
NGDN
SDF2L1
RAB11B
GOLGB1
CDC23
PPP1R12B
UBE2T
SIRT2
NFKBIB
DNAJB5
SRGAP2B
FAM72D
RAD23A
CALR
FARSA
AGER
RNF5
AGPAT1
HBP1
SYNE4
LOC101927572
ALKBH6
PHB
NFE2L1
ZNF143
HMX2
BUB3
LAS1L
RAB4B
MIA
CANX
SRGAP2C
FAM72B
PSME1
RNF31
PSME2
EMC9
TMEM70
ELOC
SLC25A28
FAM126A
DDOST
EXOC4
TOM1
SPTLC2
CNFN
RRBP1
GSTO2
MTR
PDXP
HGS
ARL16
KCTD7
TNRC6B
PSMD4
PTBP1
RNF181
TMEM150A
CCDC61
NFATC2IP
ZSCAN20
KLHDC10
LCMT1
UGP2
ERI3
BIVM-ERCC5
POGLUT2
BIVM
ANAPC5
C10orf143
SIN3A
NUP107
UBL5
PIN1
ECT2
USF3
CDKN3
PANK2
MNS1
TMEM217
TBC1D22B
LMCD1
DPH2
ATP6V0B
B4GALT2
SAMM50
CALR3
C19orf44
RBM42
TCP1
MRPL18
PNLDC1
CEP41
FBXO5
STIL
NEMP1
SUN3
C7orf57
HACL1
BTD
SPAG8
HINT2
BPGM
CYLD
ATP5IF1
PPP1R3F
FOXP3
MTOR
ZFYVE26
RAD51B
ATG9A
ANKZF1
SLC25A19
RXFP4
KHDC4
ANP32E
POTEF
SRP9
ARL17B
ARL17A
GSK3B
SNRNP25
POLR3K
STK40
PNKP
AKT1S1
TBC1D17
SPC25
CKAP2L
THAP1
INTS4
MAP3K3
CCDC66
SSR3
ETV5
PSAT1
NF2
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
PSMA5
SPRYD3
ENSA
TPRKB
FDXR
TMEM218
OTUB2
UNG
ALKBH2
PKLR
FDPS
TMPO
WDR89
RWDD1
LAPTM4A
MYH10
ANKRD39
IBTK
ZNF774
TROAP
RGMB
EHBP1
FAM117A
TLE2
MZT1
BORA
RBM14-RBM4
RBM14
FAM83D
ANP32A
HOMEZ
LTN1
MXD1
NAT16
PGK1
COPS7B
PDE6D
AGPAT5
INCENP
DCTN4
ZNF724
OPA3
RGS14
LMAN2
VPS35
NFYC
RUVBL1
MACO1
RHCE
BCAS3
PCNX3
MAP3K11
KDM4D
CWC15
LCA5
ZNF564
HIKESHI
UVRAG
KLF1
GCDH
DNASE2
ATP7B
ALG11
MVK
PPWD1
CENPK
NEK10
PCLAF
TRIP4
CKAP5
RBM15
MSTO1
TRAPPC6A
BLOC1S3
PPP2R5E
MRTFA
TMA7
CCDC51
ATRIP
PLXNB1
TRAFD1
ZNF595
GLCCI1
TCTN3
OSCP1
YWHAQ
PRMT1
VIRMA
C16orf95
GSTT2B
GSTT2
DDTL
DDT
CYB5B
TTLL5
ERG28
DICER1
KBTBD8
FER
STK11
TCIRG1
NDUFS8
JPT2
TMEM45A
CCDC77
DPAGT1
H2AX
HMBS
NCBP2AS2
NCBP2
MAMSTR
STARD3NL
DBP
CA11
SIVA1
EIF3F
ADAMTSL5
WAPL
PNKD
F11R
GPBAR1
CCDC146
CEP68
AAMP
TRIM68
MYH14
HMGCR
NDUFB3
FAM126B
RND1
YBX1
RLN2
COPS4
RPS5
CDR2
RNF225
PAF1
PLEKHA8
PNPO
PPM1B
RAP2A
PSMB7
RLN1
TMEM161A
GLO1
TMEM205
RAB3D
CCDC159
DAZAP2
CYB5A
PLPPR2
MISP3
SAMD1
C19orf67
GIPC1
WDR25
WARS1
TXNDC16
GPR137C
DUX4
BAGE4
BAGE3
BAGE
YIPF4
ATPAF2
GID4
LMOD1
TSPAN31
RRP9
PARP3
AGAP2
MARCHF9
CDK4
TIMM17A
SFXN5
KIF1B
PLPBP
TLE3
SECISBP2
CKS2
TTC16
PTRH1
CFAP157
ING1
CARS2
HJURP
RMI2
MTRNR2L1
FRMD5
KDM4A
ZMYM2
SLC33A1
TTF2
MDM1
THAP9
SEC31A
TMEM53
ARMH1
ADD1
FBH1
ANKRD16
TANGO2
ARVCF
TBCB
POLR2I
OVOL3
C2orf42
POC5
MRPL20
CCNL2
PMEPA1
FAR1
MCM5
ZNF141
SLC39A5
RNF41
NABP2
LZTS2
TWNK
MRPL43
ETF1
SPRING1
RNFT2
MAGI3
HNRNPR
TULP3
NME7
BLZF1
CDK5RAP3
LZTFL1
ARL6IP1
GET3
DDX19B
AARS1
MCM3
KMT5C
VPS26B
NCAPD3
NOL6
PMPCB
ZMYM5
SUFU
ACTR1A
RTN4
BRIP1
PSENEN
CWF19L1
WBP1L
MCCC1
CEP131
CYBC1
NARF
KANSL2
ESYT1
ZC3H10
RPL41
ING4
PMS2
AIMP2
RAB5C
SF3B5
RPL13A
RPS11
ZNF436
TPRN
TMEM203
NDOR1
RBX1
FAM161B
COQ6
CDC25A
GFM1
TOMM22
SCGB1C2
RTN4IP1
QRSL1
HNRNPAB
TSACC
CCT3
PCYOX1L
SYCE1L
MON1B
PCGF2
RBM48
PEX1
HMGB2
KLF6
FICD
HSCB
CHEK2
DHX8
STPG1
NIPAL3
TTBK2
TMCO6
NDUFA2
IK
CALM3
PPP5D1
PICK1
PHF14
ALKBH3
USP1
SZT2
MED8
TPX2
CDC45
UFD1
L3MBTL2
POTEE
ZNF513
MAP11
LAMTOR4
ZSCAN32
ZNF174
RNF121
LOC100133315
NSDHL
CETN2
TXNIP
LIN52
ALDH6A1
SNX32
SELENOI
ADGRF3
PTMA
FOXJ2
TMBIM6
UTS2R
TEX19
CEP164
SLIRP
ALKBH1
ZCCHC17
SNRNP40
GGCT
CCNB2
UTP23
EIF3L
ANKRD54
EHD4
RARS2
ORC3
CAB39L
SETDB2
SH3GL1
CHAF1A
ARAF
EAPP
C5orf51
SETD3
CCNK
ORC2
RPL18A
SLC26A2
TMEM38A
SMIM7
SARS2
MRPS12
RAD54L
TNNI3
DNAAF3
RNF103-CHMP3
RMND5A
WBP11
C12orf60
KANSL1
WDR81
TLCD2
XPO1
PARL
SMARCA2
TIMM44
SFPQ
SERP1
EIF2A
RPA2
HMGB1
USP21
PPOX
CCDC130
CALU
PMF1-BGLAP
PMF1
FAM185A
ZNF789
ATP5MF-PTCD1
ATP5MF
OSBPL9
SHKBP1
RUVBL2
GYS1
MFAP3
FAM114A2
CHD6
MTRR
FASTKD3
ELAC2
PPP2R5A
FAM53C
CDC25C
EIF5
FHIT
CABIN1
ZFAND4
IP6K1
CAND1
RERE
ZBTB9
XRCC4
TMEM167A
WDTC1
CNNM2
RAP2B
TXNL4B
DHX38
TTC31
CCDC142
MRPS30
ZNF688
SLF2
SPC24
FNBP4
HSD17B7
RBM4
MAP3K7CL
CCT8
BMT2
RNF34
ZWINT
BAZ1B
RCL1
MIIP
PPP6R3
NEU1
EPN1
WHAMM
FSD2
ABCA7
C1orf54
CIART
TMED10
TPD52L2
ABHD16B
RUBCN
PPM1K
DAPK3
CDCA8
C1orf109
RACGAP1
EIF2B2
ATF7-NPFF
ATF7
STXBP5
KIF20A
BRD8
VBP1
C14orf93
INPP5B
RRN3
PAK4
RAB6A
SETD5
MPHOSPH8
RAB39A
CEP152
NOL7
AURKAIP1
GDI1
ATP6AP1
NAP1L4
ZNF740
CSAD
KMT5A
PCBP2
HSD17B12
MLH1
EPM2AIP1
WDR45
ASPM
ENPP5
TECPR1
UBP1
NCOA2
ALG10B
VPS4B
MED15
SWSAP1
ID2
CHP1
PRCD
CYGB
EXD1
PNRC2
BUB1
GPD1
COX14
TUT1
MTA2
NUF2
GTF3C5
NUPR2
CHCHD2
RPS26
CEP192
PGAP2
MORN2
DHX57
FCF1
AREL1
DLGAP5
PIK3CA
TPCN1
IQCD
MON1A
RBM6
MCRS1
RPL31
CHCHD3
SCAI
PHF12
RPN2
MROH8
SNRPE
UBE2S
MIGA1
PITX2
RGL2
PFDN6
WDR46
KDM5A
ZNF586
CLIC1
MSH5
GRK6
DDAH2
SLC39A1
CRTC2
CREB3L4
TOGARAM1
KLHL28
JTB
RAB8A
LMBR1L
TFB2M
CNST
TMEM256
PLSCR3
NLGN2
ZNF493
KRI1
CDKN2D
OARD1
NFYA
C9orf85
ABHD17B
DCAF4
TRIM9
IVD
ZNF547