ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2635935 | Hep G2
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◣ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

NPAS4
PLA2G2A
SLC45A4
DNAJB3
CYP26A1
XKR7
IQSEC3
SLC6A12
ZNF775
THOP1
SGTA
MFSD10
CCL16
CCL14
NBEAL2
CCDC12
TTC6
FOXA1
ANKS4B
INSM2
AIFM2
PYGL
RHOQ
ATP6V1E2
DHRS3
ELL
ZSWIM1
SPATA25
NEURL2
CTSA
ARID3B
HTR5A
SH3YL1
ACP1
MRPL20
CCNL2
NHLRC1
UGT1A1
TRAF7
RAB26
FURIN
LIN28A
GPC6
TCP10L
CCDC38
AMDHD1
KLHDC2
BHLHE40
CP
COL5A3
LCK
FAM167B
ABCC10
SPOCK2
FRYL
PHETA1
FOXA3
NINJ2
NKX1-1
RHBDD1
IRS1
KCNH7
IRF2
PCGF1
LBX2
SLC39A7
RXRB
HSD17B8
COL11A2
RING1
KRT39
HOXA3
HOXA4
HOXA5
RNF144A
SMIM11B
SMIM11A
KCNE2
DPP9
CSF3R
ARAP1
NFE2
ITGAV
SPINK1
SMIM22
ROGDI
FAM24A
RGS3
NAT8
RHBG
CCR6
ATP2B2
FGG
DUSP9
RPL22
RNF207
BACE1
TNFAIP2
ARRDC2
BMP4
VSIR
CARD14
AGPAT3
OSGIN1
DONSON
SOCS2
TRIM26
ASB2
TRIM46
KRTCAP2
INHBE
GLI1
SREBF1
RARA
RAC1
SQSTM1
FST
DAGLB
KCNN4
WSB2
UACA
RARB
COL18A1
ZNF564
PDE12
CELSR3
UBE2F
CRLS1
TLCD4
TLCD4-RWDD3
CAPG
SH2D6
A2M
ZFP36
PLEKHG2
AGT
HOXA1
TMEM86A
DCDC2
HAUS5
SPATA2L
NINL
IRF9
STRN3
AP4S1
LIPE
PTK2B
SERPINF2
TF
ZGPAT
ARFRP1
ADSS1
LRP5L
ARL8A
PAQR8
CEMIP2
PC
ANKRD28
PLEKHF2
TMEM80
DEAF1
EPS8L2
ATP1B1
NEU4
PCK1
DACT2
CX3CL1
ADAP1
TRIB3
TMC7
ZCCHC14
CDK3
APOC1
APOE
PIWIL2
E4F1
DNASE1L2
IL1RL2
GLRA1
SDSL
SPCS1
GLT8D1
L1CAM
SOAT2
IGFBP6
LMNA
MEX3A
NUBP1
SCGB2A2
EXOSC4
NR2F6
RAB37
OPLAH
FGB
PLRG1
OARD1
NFYA
NANOGP8
APOC2
APOC4
OMP
RASGRF1
CSNK1D
SMIM17
TET2
GGT1
LRRC75B
POLR3H
POR
ETV4
DNAH1
ECE1
PARP9
DTX3L
GPRC5C
CPLX2
ERCC1
PECAM1
GPAT4
ACSL4
TRPM1
RAB5IF
ST6GALNAC6
NHLRC4
PRR35
NSMCE1
FILIP1L
CMSS1
FGA
PLEKHA7
RAB17
TRIM11
ZFAND2A
HPCAL1
ZC3H18
CYP3A7-CYP3A51P
CYP3A7
PCIF1
FOXP4
CLNS1A
SORL1
CAPNS2
CELF1
PTPMT1
H2BC17
H2AC17
H3C12
NIPSNAP1
NPAS2
ARHGEF28
NDUFV2
BRCA1
H2BU1
H2AW
MLLT6
FAM107B
GDF15
SECTM1
HNRNPAB
GMCL2
MEIOB
SERPINB9
LRRC20
SLC50A1
EFNA1
TCIM
C1orf115
TRIB1
PACSIN3
ARFGAP2
EGFL7
TRIM44
TIGD2
PPP1R35
PIGV
USP48
ADGRG3
ID1
NOL7
COG1
NME4
DECR2
CHN2
CPVL
EIF1B
NEDD9
FASTKD1
SLC4A11
GPCPD1
PROC
SLC30A4
ETF1
GSN
AMBP
CXADR
SEMA7A
PLGLB2
PLGLB1
TMEM37
HNF4A
C9orf152
SERPINE1
UGT2A3
SPAG9
SLC51B
TANK
KRTAP5-6
NDUFS7
ABCC6
ERRFI1
F2
OTUD7B
CCDC65
NIN
NEK10
ITGAE
MRPS28
IER3
FLOT1
MAST1
RTBDN
TNFSF4
IL27
ERBB3
COMT
MACROH2A1
BHLHA15
ATG16L1
NRSN2
SMAD3
PRR15L
ACTL7A
ABCA4
AKAP1
APOC3
APOA1
APOA4
CTSW
NAGLU
EFEMP2
EPHX1
TACC1
SSTR5
MBL2
MTRNR2L2
MSH3
DHFR
DUSP1
NBPF1
ADGRA1
UBAP2
PDE6G
SLC4A3
PRM3
PRM2
PRM1
C4BPB
TMEM270
SIRT1
DAPK1
MINDY2
ANGPTL4
MUS81
CFL1
C1RL
ITPK1
CALML3
FBXO31
MAP1LC3B
ACSS1
SHPK
CTNS
FARP1
RBKS
BABAM2
APOB
TMTC4
ZNF22
CAT
GPT2
MAMSTR
NTAN1
RASAL3
BAIAP2
LDLR
RBFOX2
BARHL1
SSBP4
LEKR1
SLC47A1
STX1A
ALDH4A1
HAL
LYST
MOB3A
IZUMO4
TMEM169
PECR
MYH4
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
PHF8
VWA5B2
MTUS1
ZKSCAN1
BCL3
ASB13
HPD
WNK4
VPS25
MIDN
ATP5F1D
CBARP
TRNP1
NCOR1
RTN4
CETP
NFKBIA
RARRES1
CCDC57
RAB42
ARHGAP40
NRL
DCAF11
INPP5D
PAH
PNPLA3
ZNF181
TDRD9
ATP5MPL
ARFGEF2
FRMD5
NDUFS1
EEF1B2
AGMAT
SHFL
PPP6R3
TLE1
RCBTB1
MIXL1
SYNJ2
RNF103-CHMP3
RMND5A
TRIM24
TOP1MT
SPG7
NOL4L
SDC4
CST3
CTNNA1
UMPS
PRKAG2
PHF21A
TRIM47
ZNF7
NKPD1
SCYL1
ITIH2
AUNIP
MARCHF3
MAPK8IP2
PDE4D
APEH
SH2B1
MPC1
TMPRSS3
CST5
HIVEP2
GFOD2
PSPN
ALKBH7
SEPTIN9
SPINT4
TBL2
TRIM25
FAM20A
CA1
COG2
NR1H3
ACP2
PON2
PRIMA1
FAM83G
GPR20
TUBGCP3
KIAA0232
NR1H4
CRLF1
TMEM59L
PTPN23
SLCO4A1
SRC
SLC13A3
UCHL3
COMMD6
SLC6A9
PCK2
USP50
C3
ECI2
MIPOL1
MBNL3
CDC42EP1
LRP11
CPNE7
SLC7A2
UAP1
DHODH
NR0B2
NUDC
BEAN1
CHGB
ARHGAP18
FUT1
FGF21
MTRNR2L1
C11orf86
SOX9
MRPL33
DLGAP3
LGALS2
EPHA10
CDC42BPA
PPP1R14A
FETUB
SLC25A51
LEPROTL1
LRRC27
IL6ST
LARGE1
TMEM88B
VWA1
ATP2C2
HSPA1L
HSPA1A
LSM2
CERK
SH3PXD2A
NTMT1
MRPS31
IGFBP4
DDB2
ASAP2
RCL1
SLC12A5
MMP9
SPDYE6
LOC100289561
TMIGD1
NCS1
ROBO3
CDK5RAP1
RCC2
PSMD1
C3orf84
ZNF367
RNF113B
NR1I3
LRMDA
SMARCD2
BCAR1
AHDC1
SDF4
B3GALT6
C1QTNF12
SERPINA12
P2RY11
EIF3G
PPAN-P2RY11
PPAN
NEK4
ITIH1
HS6ST1
CCR7
REXO1
KLF16
JAK1
TRIM31
BCKDK
AGO2
AGPAT2
PPCDC
SLC2A8
GNAZ
BCL2L1
G6PC
RASSF5
SEC14L4
SYNPO
METRN
ANTKMT
CCDC78
PRCD
CYGB
MLEC
ORMDL3
GSDMB
DHRS4
DHRS4L2
KPNA2
SNX33
EDARADD
HERC5
RPGRIP1
FSTL3
ATP6V1G1
ROCK2
ZNRF3
SNAP25
TMEM9
CCS
CCDC87
IAPP
CRTC1
EBF4
NUP93
NAPB
NPM2
OTUB1
COX8A
CLDN16
LDLRAD1
TXNDC11
PGAP3
ERBB2
TOP2B
TCOF1
SST
ESRP2
TRIM74
TRIM73
C6orf136
PLIN4
TCIRG1
NDUFS8
ERICH5
CPT1A
TCAF1
BMF
PPP1R18
NRM
GIP
HSPA1B
ZNF497
A1BG
KDM6B
MLXIPL
ADCY9
STK19
LOC110384692
DXO
C4B_2
C4B
C4A
SEMA4G
WBP2
UNC13D
TSC2
NTHL1
SLC9A3R2
SCAP
AOX1
PTP4A1
NDUFAF5
ESF1
SLC20A1
KAZN
SERPINF1
SERINC2
SLC35E2B
CPB2
FASN
ETFB
CPS1
BORCS6
AXIN2
RASSF6
TM4SF19
E2F3
CPE
SYCE3
TMEM252
SOCS3
MRPS24
GRAP
TOMM40L
APOA2
FCER1G
CHKA
FBXO25
TTI2
BDH1
ATP5MC1
PIM1
ZNF503
SRP14
CAPN3
TST
MPST
ECH1
RARG
SRCIN1
PDE4C
RPUSD3
GTF2E2
TBX4
CEP250
CADM3
SLC29A4
NQO2
FAM174C
EFNA2
ANKRD39
COPS8
SEMA4C
CCL15
ARSF
ANGPTL8
CEP85L
ZDHHC19
SLC51A
CEBPB
TMEM8B
FAM221B
USP42
CNOT2
ZBTB45
SLC27A5
ZMIZ1
STK24
ERN2
CA5A
SEC23A
SCRT1
DGAT1
PLTP
RNF213
DNAJB1
LRRC69
CYP3A43
MT2A
GRAPL
STAT5B
BAZ1A
CDH1
PCGF2
GSTP1
NEU1
DLC1
IQGAP2
IL6R
MYL12B
HSCB
CHEK2
PROZ
TM4SF1
XKR9
LACTB2
SLC10A1
CBSL
CBS
MOGAT3
MTRNR2L8
RIPOR3
CYP3A5
DNAJA2
SEBOX
SARM1
VTN
NLRC4
CEACAM16
LHPP
SERPINB6
FAM110B
THUMPD3
IGFBP1
ALAD
ATP8B1
IL1R1
XBP1
PCNA
CDS2
TMEM123
PSD4
ABCD3
ACTR3C
SYT8
TNNI2
RER1
MORN1
DCAKD
NMT1
CLK1
MRPS11
MRPL46
OBSL1
INHA
BHMT
RBP5
CLSTN3
DIDO1
KCMF1
SAMHD1
RAPGEFL1
NAA38
SULT2B1
CHD3
MGST2
PIGS
ALDOC
VAMP8
VAMP5
SMIM35
PACSIN2
CD7
INPP1
SERPINB1
IFT52
HECTD4
BCL11B
TMED5
CCDC18
SPRED2
RRBP1
MCUR1
PRUNE1
MINDY1
SMG1
BANF2
ATP13A3
LOC644090
SHB
ZNF17
EZR
AKTIP
MLANA
THRSP
PANK2
CCND1
WWP2
KRTAP10-12
FAM3B
TOPBP1
GPN2
LHFPL5
CLPS
PEBP1
C20orf204
KPNA7
OR1F1
G0S2
FOXJ1
RTN4RL2
KANSL3
FER1L5
LRRC45
CENPX
UHRF1
ARRDC5
EXOC3L4
ZNF23
KLF6
NOMO3
NOMO2
ZPR1
APOA5
CBR1
GFOD1
ELF3
STMN3
RTEL1
CYP1A1
CLDN1
RGN
NDST1
NT5E
KRTAP5-8
KRTAP5-7
SCN1B
HPN
TGFB1I1
TMCO6
NDUFA2
IK
CD14
RPS6KB2
PTPRCAP
KRT8
ADGRG6
EPAS1
IBTK
TTYH3
ITLN2
ATP4A
LASP1
TARS1
HBA2
HBM
RNASEH1
LSM14A
RNGTT
MAFK
HSPA4
MRPL2
KLC4
CUL7
ENOX2
LOC102724265
CYB5R4
RIPPLY2
URGCP
TRIM40
URGCP-MRPS24
LAMP1
TMEM53
ARMH1
MYO1B
HCRT
KCNH4
RCAN1
SRRM3
H6PD
TRAF3IP2
IL17F
RNF10
COQ5
RNPEPL1
DUSP28
ANKMY1
LMNB2
CYP19A1
FOXP1
MMP24
WDR90
TGM2
MED11
HDAC5
ZMYND15
CXCL16
GPR171
CREB3L1
SLC16A5
NKD1
SLC12A9
EPHB4
SNTB1
RGS19
OPRL1
LKAAEAR1
SUN5
BPIFB2
TBC1D14
TTC7A
MCFD2
PDK4
CCL20
KLF3
RAB35
PFKFB1
APEX2
HPX
BSPRY
C3orf86
CERS2
ANXA9
ZNF101
ATP13A1
EMC3
ARRB1
BPIFA3
MASP2
SLC38A3
SERPINA11
HIPK1
NGEF
CHD1L
MAOB
FMO5
USP2
TOR3A
TSSC4
VWC2L
NANP
VPS13A
AP1M1
SRCAP
LOC730183
ELK4
SUN2
C19orf12
PRSS48
MRPS23
MYT1
XRCC4
TMEM167A
PLLP
RPLP1
KHK
PLOD2