ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX19662636 | T-47D
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◣ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

PGK1
SPATC1L
SP2
TEPSIN
NDUFAF8
RAB5B
PMEL
CDK2
ARRDC4
DOLPP1
DNM2
OSBP
ARHGDIA
P4HB
KATNB1
STIP1
NLK
ZNF687
UBE2C
SP1
TOP2A
GOT1
TCERG1
G3BP1
GLRX5
TDRKH
EVI5L
ACTL6A
ANKHD1-EIF4EBP3
ANKHD1
STT3A
SLC34A3
TUBB4B
FAM166A
STPG3
RFX1
ARID4A
HSP90B1
DUX4
EIF2AK3
KAT7
PITPNM1
BAZ2A
ATP5F1B
PHPT1
AJM1
SYP
MAMDC4
PRICKLE3
PXMP4
SKA2
PRR11
HNRNPUL1
HSPA5
TMX2
MED19
RFWD3
SHC1
FLAD1
CKS1B
PRR14
FBRS
TMEM60
PHTF2
JUP
TOM1L2
DRC3
MVD
ZFYVE21
XRCC3
TMEM94
DROSHA
C5orf22
RECQL
GOLT1B
SNRPF
TMEM70
ELOC
DCAF7
TEDC1
CRIP1
RBM27
ARNTL
SPSB3
MRPS34
EME2
CIC
MPV17L2
MSANTD4
HNRNPC
TMEM218
NCDN
KIAA0319L
LRRC45
CENPX
RAC3
H2AZ2
NPR1
ILF2
ARMC1
YIF1A
TMEM151A
TRAF2
ATP5MC1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SULT1A4
SULT1A3
TOMM40
FAAP24
CEP89
KAT6B
PRKACA
WDR97
MAF1
CYC1
MTMR4
SEPTIN4
OS9
KPNB1
MTMR12
CORO1A
PWWP2A
ZNF48
TBC1D10B
MYLPF
PDK2
XAB2
STXBP2
PCP2
CNOT1
GPR108
TRIP10
E4F1
PGP
MLST8
BRICD5
COQ8A
ZNF77
RPLP0
GCN1
IMMP1L
ELP4
KHSRP
AKR1E2
CAMTA1
HNRNPL
TBCCD1
DNAJB11
SLC25A25
NAIF1
SPAG7
SARNP
ORMDL2
EEF1AKNMT
CDC23
THRA
VIRMA
MED24
STAP2
MPND
GOLPH3L
PROSER3
LIN37
HSPB6
COPZ1
PSMD4
SRGAP2
FAM72A
PSPN
ALKBH7
POU5F1
TCF19
CCHCR1
HGS
ARL16
DCTN4
PPWD1
CENPK
PPP1R3F
FOXP3
ZFYVE26
RAD51B
SLC39A2
METTL17
SERP1
EIF2A
ANAPC5
LRCH4
FBXO24
YJU2
TICRR
WDR25
WARS1
MTR
PHB
SSR3
NUMB
NFATC2IP
PKLR
FDPS
C16orf95
HIKESHI
PITX3
GBF1
SEL1L
ARL17B
ARL17A
GPR84
ETF1
POLR2G
ZBTB3
TMPO
AGER
RNF5
AGPAT1
CENPF
CNEP1R1
PRPF40A
ARL6IP6
ANP32A
RBM15B
MANF
GATAD2B
HMGCS1
DNAJC14
KDM4D
CWC15
SRP9
MTFR2
LENG1
TMEM217
TBC1D22B
FAM72C
SRGAP2B
FAM72D
FRYL
MSMO1
PNPO
UTP23
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
MLH1
EPM2AIP1
AK2
MNS1
ABHD2
VPS26B
NCAPD3
ENSA
PI4K2A
MORN4
BCAS3
PANK2
CCDC77
RXFP4
KHDC4
ZBTB32
NCBP2AS2
NCBP2
FAM161B
COQ6
IARS1
HBP1
ZBTB5
ZSWIM3
ACOT8
BIVM-ERCC5
POGLUT2
BIVM
DCUN1D4
RAD23A
CALR
PPP1R12B
FARSA
UBE2T
ZSWIM4
POC5
VCP
FANCG
TCIRG1
NDUFS8
PRRC2B
CHCHD6
TTLL5
ERG28
PCGF2
ECT2
CNOT3
PAN2
IL23A
ZNF680
UBALD2
BRIP1
KDM4B
SPTLC2
TSACC
CCT3
WDCP
GSK3B
ZNF785
RUBCN
UMAD1
USHBP1
BABAM1
TMEM160
MSTO1
TMCO6
NDUFA2
IK
MOGS
WBP1
INO80B
STIL
RAB11B
HACL1
BTD
HMGCR
GATAD2A
MTOR
NGDN
ZNF691
CKAP5
ANP32E
GLCCI1
CBX5
UNG
ALKBH2
HNRNPA1
ZDHHC16
EXOSC1
SIVA1
RBM48
PEX1
MRPL34
DDA1
ABHD8
BRAP
ACAD10
FBH1
ANKRD16
TROAP
NUDT2
KIF24
DDOST
SLC25A42
SIN3A
IVD
CYTH2
HNRNPAB
MCCC1
STK40
AP3M2
RAB4B
MYH10
MIA
IFT27
ISOC2
DPAGT1
H2AX
HMBS
KCTD2
ATP5PD
ZNF688
MTRR
FASTKD3
RWDD1
PRDM10
SRGAP2C
FAM72B
WDR45
RBM42
FAM126A
FRMD5
TXNIP
ASF1B
ACAP2
MCM3
GFM1
RPS20
PCNX3
MAP3K11
WDR89
MAP3K3
SLC39A5
RNF41
NABP2
ZSWIM1
SPATA25
NEURL2
CCDC146
INCENP
CYCS
NUPR2
CHCHD2
ZNF143
H2BU1
H2AW
RGMB
FAM111B
MAMDC2
NCOA2
LTN1
ALKBH3
CDCA8
C1orf109
CFAP43
BPGM
CDKN3
CHD6
NDUFAF2
ERCC8
THAP1
TLE3
IFI35
RPL27
SDHD
DDX39A
MCM10
ZMAT2
HARS2
HARS1
H3-3B
UNK
USF3
DDX49
COPE
NAT16
ZBTB26
RABGAP1
RPS5
RNF225
FRG2C
PAIP2B
TRAFD1
FAM156A
PODNL1
DCAF15
CCDC66
CLDN9
PLEKHA8
STARD3NL
NRL
DCAF11
ARHGAP19
CANX
ATG9B
ABCB8
ABL1
GOLGB1
DICER1
ZNF493
RBM15
KANSL2
FBXO5
PRADC1
CCT7
ATP7B
ALG11
KCNAB2
GTPBP6
TTC14
MTRNR2L8
SLC33A1
ZNF727
MRPS28
TRAPPC6A
BLOC1S3
CDR2
CD68
IBTK
EIF4A1
WBP1L
SPAG8
HINT2
SLC25A28
HDGFL2
SYCE1L
MON1B
TXNL4B
DHX38
SETD3
CCNK
ZWINT
FRG2
CEP131
RGS14
LMAN2
USP21
PPOX
CYB5B
ZNF775
MRPS30
HMX2
BUB3
NUCKS1
SECISBP2
CKS2
CYLD
NFE2L1
FAM53C
CDC25C
LZTFL1
GET3
NEMP1
SPRING1
RNFT2
RAB3A
INTS3
RPS26
DHX8
IGSF9B
PPP6R3
POP5
SRSF2
MFSD11
AGFG2
SAMM50
PTMA
SPC25
SLC25A19
NDUFB3
FAM126B
RBM14-RBM4
RBM14
UBE2J2
CCDC61
ZNF595
FDFT1
HDGF
MRPL24
BRCA1
RTRAF
UVRAG
TOGARAM1
KLHL28
PCLAF
TRIP4
MXD1
YIPF4
SNRPE
PRMT1
TNRC6B
PMS2
AIMP2
TOM1
LAS1L
PICK1
SPRYD3
KDM4A
GLO1
ZBTB6
RC3H2
PPP2R1A
CNPY3
NUF2
CCDC130
NUP107
TRAPPC6B
PNN
RGL2
PFDN6
WDR46
VPS35
OPA3
LAPTM4A
KLHDC10
HSD17B12
UBP1
FAR1
TSKS
AP2A1
PPP2R5A
RRBP1
CGGBP1
ZNF654
TPRKB
OXNAD1
DPH3
ZSCAN20
DLGAP5
NDUFB5
MRPL47
F11R
BUB1
ATPAF2
GID4
PDXP
CNFN
GGCT
GRK6
TYK2
ZBTB9
STXBP5
ZFAND2A
ZNF555
KRR1
CST6
EIF1AD
BANF1
SF3B5
GINS2
CDC6
RNF181
PABPN1
TMEM150A
ZNF574
FCF1
AREL1
EIF3F
TMBIM6
DPH2
ATP6V0B
B4GALT2
FAM156B
PCNT
C21orf58
ESR2
JPT1
NME7
BLZF1
RTN4IP1
QRSL1
TLE2
H4C12
H4C11
H2BC15
H2AC15
LCMT1
TNFAIP8L2
SCNM1
LYSMD1
TMOD4
CDK5RAP3
ASPM
ERI3
TCP1
MRPL18
PCBP2
PPP1R11
POLR1H
HLTF
RAP2A
LINC02210-CRHR1
PNLDC1
TOMM40L
APOA2
CSTF1
AURKA
EAPP
ZNF564
DUSP10
GHITM
RAP2B
CCDC59
CDK5RAP1
MMACHC
CCDC163
TESK2
H2BC14
H2AC14
PEX2
H3C10
H2BC13
H2AC13
ELK1
VBP1
MVK
ENPP5
VAMP2
PER1
SLIRP
ALKBH1
DNAJB5
TPRN
TMEM203
NDOR1
LMCD1
PPM1B
SIRT2
NFKBIB
PSMA5
NOL6
ANAPC15
TMA7
CCDC51
ATRIP
LAMTOR1
PLXNB1
GINS1
CENPA
MFAP3
FAM114A2
CHCHD3
RUVBL1
ACTN1
GPR137
CAND1
ZNF141
RPS24
POLR3A
PDIA4
RNF34
C22orf39
RBM4
LMOD1
TIMM17A
ALG10B
PIP4P1
OSGEP
APEX1
KMT5C
PA2G4
PNP
USP16
RWDD2B
INTS1
PRCC
SOX4
SCAI
BBX
FAM204A
FRG1
LRIF1
KMT5A
FAM83D
RAB5C
KCTD9
CDCA2
RAB6A
EHBP1
CREBRF
PHF14
TRIM68
INTS4
ZMYM5
PCYOX1L
DCAKD
NMT1
PGBD4
EMC7
PPP2R5E
KIF20A
BRD8
SLC2A8
NEU1
CCDC116
SDF2L1
ZNF736
CDC20
ELOVL1
PPP1R36
HSPA2
IDI1
PHF12
WDR37
UBE2B
CDKL3
TPCN1
IQCD
SLC39A9
ERH
TBRG1
LSG1
LIN52
ALDH6A1
ADAMTSL5
FAM117A
NUDT5
CDC123
BAZ1B
PMEPA1
FDXR
MRPS23
PGAP3
ERBB2
MBD1
CXXC1
FBXW11
CENPM
ZNF724
H2BC4
H2AC6
USP42
RABL3
GTF2E1
CCND3
UBL5
PIN1
DGLUCY
RPS6KA5
TAF8
TSPYL2
COL23A1
HAGH
FAHD1
BLM
LIM2
OGFOD1
NUDT21
PC
HIBADH
AURKAIP1
SRPRA
TFB2M
CNST
ZNF138
RLN2
SYNE4
LOC101927572
ALKBH6
SAMD10
PRPF6
LCA5
LARS1
MORF4L2
ATP6AP2
H4-16
H2AJ
XRCC4
TMEM167A
HMGB2
PNKP
AKT1S1
TBC1D17
RPL13A
RPS11
RLN1
ETV5
CEP164
GSTT2B
GSTT2
DDTL
DDT
NUP214
GSTO2
DBNDD2
PDE6G
STAT2
APOF
TUT1
MTA2
FAM222B
CCDC137
EXOC4
TMEM41A
TXNDC16
GPR137C
MIA3
HMGB1
SELENOI
ADGRF3
C5orf51
OSCP1
FRA10AC1
PARL
KBTBD8
TIMMDC1
IFT20
TNFAIP1
H4C9
H2BC12
H2AC12
PARPBP
NUP37
MRPL16
PSMA3
SNRPA
C19orf54
CFAP45
PMF1-BGLAP
PMF1
FANCF
STARD4
CLNS1A
CSNK1G3
MZT1
BORA
TSR2
TOB1
PDCD6
OTUD6B
C2orf42
HYLS1
CYB5A
PSMB7
MDM1
SCOC
RPL37
CARD6
GORAB
TULP3
TTBK2
SLC30A9
DCAF4L1
FKBP3
FANCM
SASS6
ARL6IP1
C12orf50
C12orf29
EIF3M
DDX50
KCTD16
YIPF5
FAM76B
CEP57
NRDC
ROMO1
NFS1
CSTF3
TOMM70
LNP1
MIIP
UTP25
PPP2R5B
ATG2A
SF3B2
GAL3ST3
WDR53
FBXO45
TIMM23
CCDC200
DMXL1
SNRPG
FAM136A
SEC23B
RRP9
PARP3
TFAP2C
YWHAQ
MPHOSPH8
NPAT
ATM
PAF1
STAT3
PLPBP
OXSR1
CRYAA2
CRYAA
MAMSTR
FNBP4
ZCCHC9
VCPIP1
C8orf44-SGK3
ZNF430
PGD
FAM111A
TUBB
MDC1
SFPQ
NME1-NME2
NME1
PTBP1
HSPA8
ZDHHC12
DDX10
GTF3C5
BORCS7
ZNF774
VASN
WDR3
GDAP2
EIF3D
GET4
TMEM183A
ISY1-RAB43
ISY1
TAF1A
ALG10
ELAC2
IL6ST
C10orf143
HJURP
NXT1
CCDC15
TTI1
RPRD1B
SLC46A3
ETFBKMT
CRNKL1
CFAP61
ALDH3A2
GMNN
H4C2
H3C2
H2AC4
RNF39
VPS29
RAD9B
MRE11
ANKRD49
ANXA6