ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX2748855 | Adenoid cystic carcinoma
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◣ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

LPCAT3
RARB
PDE12
ING1
CARS2
MRPS28
RNASE6
EDDM3B
PXYLP1
NDUFS7
CBX5
HNRNPA1
CNOT2
OTUD7B
RBKS
BABAM2
POLD2
RARG
ZBTB7C
ZNF775
FRMD7
SMARCD2
KANSL3
FER1L5
NFE2
ITFG2
ZCCHC24
ATXN1L
ZNF827
GPRC5A
REEP6
PCSK4
TAF1A
DONSON
FTL
BAX
PKN2
CLK1
METTL3
HORMAD1
WDR7
IER3
FLOT1
TUBB
MDC1
RAE1
MTRNR2L3
RPGRIP1
ZFP36L1
MTRNR2L2
MSH3
DHFR
CAPN1
GATD3B
GATD3A
SYTL3
DYNLT1
KDM3A
ZGPAT
ARFRP1
NANP
CCDC174
PPP1R14B
VEGFB
LOC114841035
FKBP2
STX18
MBD2
RASA4
KDM6B
ASNSD1
ASDURF
GPR108
TRIP10
MAMLD1
EIF5
MAML3
CTF1
BCL7C
NR2C1
KIF5C
MTRNR2L8
PDE6B
RASA4B
NUDT15
UQCR11
PHB2
ZNF395
BACE2
USP42
RARA
SKIDA1
MLLT10
SLC10A5
IMPA1
C19orf12
HECTD4
CTBP2
UROS
BCCIP
MTRNR2L1
KLK9
KLK11
KLK10
ARHGAP12
TRMT1L
SWT1
LIPA
TRIP12
FBXO36
USP1
PTGES3
TMEM241
RNASE4
ANG
CLCN3
NEK1
ARHGEF35
FAAP24
CEP89
STAT2
APOF
DUS1L
SNRPA
C19orf54
MPZL1
CTSW
EFEMP2
DPH2
ATP6V0B
B4GALT2
KRT19
KRT15
ANTXRL
NCOA7
CFAP69
PMPCB
SMIM3
AZGP1
DNAJC16
CASP9
PPP2R5A
PLEKHA8
ARHGEF5
ANKS1B
MIGA1
TRABD
CYB5R4
RIPPLY2
MRPS31
DUX4
CPNE6
TEX264
CBR4
INTS5
GANAB
SLC29A2
S1PR4
NCLN
SEPTIN2
HDLBP
NAGLU
UQCRC2
FOXP1
PPP1R13B
USP37
CNOT9
SZT2
MED8
PDCL
RPL37
CARD6
COL23A1
ALDOA
KMT5A
FXYD3
SREBF1
MED9
RPL22
RNF207
SMIM20
FAM78B
GMNN
CDC20
BAZ1B
DRG1
SLC25A16
RPLP0
GCN1
HGH1
CDC42SE2
PSMB4
SERTAD2
FKBPL
ATF6B
COLEC11
NPNT
CSH2
TSPAN10
NPLOC4
SOAT2
IGFBP6
RASAL1
ZSWIM1
SPATA25
NEURL2
CTSA
NFIC
RNF121
LOC100133315
SENP8
MYO9A
SYTL1
MRPL54
APBA3
RAX2
ZSWIM8
CHCHD1
FUT11
SH3YL1
ACP1
ADAM17
RNF220
PLA2G6
ST8SIA6
TM4SF1
MINDY3
ABCC10
CCDC59
SLC11A2
CAPNS1
C6orf47
APOM
BAG6
TP53INP2
AARS2
TECPR1
MELTF
ABHD3
SH2B1
CCL28
TDG
C12orf73
RGPD1
RGPD2
GDPGP1
CIB1
RPL5
TDRD3
TNPO3
SPIN1
EN1
HBP1
AFF1
COL27A1
KLHDC2
SMIM22
ROGDI
VPS26C
PARP9
DTX3L
MRPS16
DNAJC9
FDXACB1
C11orf1
ALG9
RPS3A
FAM20B
PCTP
TTK
DCPS
VARS1
SOD2
WTAP
NAA40
FABP5
NARS1
TLR5
EXOSC4
MYADM
GPAA1
TNFAIP8L2
SCNM1
LYSMD1
RPS19
KRI1
CDKN2D
ENTPD5
BBOF1
TRIB1
TF
PDCD10
SERPINI1
HDAC9
PCCA
DBP
CA11
ATXN2
NOTCH1
EPM2A
SEMA4G
LOC105378979
PACSIN2
KBTBD3
AASDHPPT
FGF13
ZNF133
ARRDC2
SLC39A9
ERH
CLDN11
SLC30A4
SAMD12
ZBED9
HCN3
CLK2
POLR2G
SIPA1
RIMS1
DNAJC27
TAF6L
ACYP1
ZC2HC1C
TMED5
CCDC18
MKRN3
CDC42EP1
DUSP4
CGGBP1
C3orf38
DHRS3
BRD2
SRPX2
TSPAN6
ARIH2
DCLK1
SULF2
ZASP
SAP25
LCN2
MBD6
DDIT3
CEP70
CDH11
TRIM38
ASB1
KLF5
AP2M1
TRIM11
MIEN1
GRB7
TRIM17
PCGF2
ZNF77
SRCAP
LOC730183
TMED10
MINDY2
ARID4A
UBE2V2
MDM2
DZIP3
CIP2A
PRUNE1
MINDY1
TEX12
BCO2
SLC25A6
DPP9
TRIM54
SLC30A3
DNAJC5G
PSPN
ALKBH7
RBM19
SEC24C
ECH1
IFT22
ZNF318
SP2
H2BC17
H2AC17
SKIV2L
NELFE
ABHD14B
ABHD14A-ACY1
ABHD14A
PCBP4
ACY1
OR2B2
TXNDC11
ACSS3
PTEN
KLLN
LRRC1
CD46
SMPD2
PPIL6
ESRP1
RPLP1
RPS8
KCNQ4
ZNF746
ATP6V0E2
TCP11
GPATCH8
INPP5K
KAT6B
AP1B1
ETFRF1
CFAP94
MACROH2A1
ZNF384
LEKR1
ODF3L2
MADCAM1
SLC25A35
RANGRF
ZNF85
SEC23A
IGSF10
ANXA7
SNX12
SPATS1
NEPRO
STAM2
ERCC1
GBA
LSM8
CLECL1
NOTCH2
FDX1
MICALL1
URGCP
URGCP-MRPS24
ADA
OTUD5
KLHL24
POMP
TBC1D22A
MAMDC2
CNP
MRPS36
PIM3
OSGIN2
SCAP
AKTIP
HNRNPA1L2
OR8B12
CFAP73
ELOVL4
DLG2
MRPS33
DNAH14
ARHGEF25
DTX3
CNDP2
GRK6
HEXIM1
CCDC71
KLHDC8B
CCDC102A
ADGRG5
GSTT2B
GSTT2
DDTL
DDT
PHGDH
SPAG16
KCTD9
CDCA2
FRG2
ACTR3C
TP53INP1
SNRNP35
ZBED6CL
LRRC61
FRG2C
LARP1
IVNS1ABP
DKC1
MAMSTR
CSTA
CS
TRIM26
POLDIP3
SMAGP
ANAPC15
LAMTOR1
SBNO1
ACBD3
TAOK3
SUDS3
ADM
HIKESHI
ZMIZ2
OTUD6B
KBTBD2
TBC1D8B
TTC28
WWTR1
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SULT1A4
SULT1A3
RNF44
CDHR2
PTBP3
CAND1
B4GALT6
PRR3
GNL1
IQANK1
FAM83H
KCNS3
HAUS5
DYNLL1
CLIP1
SRSF9
RAB3GAP2
ZBTB20
RNGTT
LUC7L2
OLFML2A
NR6A1
SYS1
ESR2
SEC61B
ALG2
FAM178B
ZXDC
ZNF492
CXCR4
ANO1
NFKBIA
DCAF7
OPTN
CCDC3
ANO6
SLC25A53
FAM199X
OPTC
RFLNA
SRSF2
MFSD11
FAM3C
SLC22A4
HIC1
KRT14
RPL34
KMT5C
ZNF446
ZNF324
MED12L
EXD2
TRIM7
CCDC120
TJP3
EPN1
C16orf70
LOXL4
RAB18
CDC45
UFD1
XRCC6
DESI1
CEP78
LEO1
MCOLN1
BAG2
ZNF358
PCDH1
C11orf91
AXDND1
CYP4F11
PSMA3
MGAT1
MROH1
PIK3CG
ENOX2
RBM7
C11orf71
TMEM262
PAXBP1
GTF2H5
QSER1
LMF1
SOX8
EAPP
IRF9
PITX3
GBF1
SRSF3
PCARE
SIRT4
COX5A
TRIM2
MYL12B
NEK2
MYL12A
CLUAP1
C16orf90
PRKD2
ATL1
MAP4K5
ZFP41
NUDT17
TMEM167B
PEX2
STK11
SLC38A1
ZNF563
MT2A
SLC3A2
C12orf65
B4GALNT3
SCYL3
ISYNA1
CLDN15
IRX3
GP9
MFSD8
ABHD18
PCBP2
FZD4
CALM2
CSTB
BBS9
SREBF2
P4HA1
IRAK1
ZNF22
AASDH
DDX1
FAM114A1
TMPRSS12
RNF10
COQ5
UGT1A3
UGT1A4
COMP
KCNN4
CSF3R
DNAJA2
PLBD2
ZBTB44
TMEM79
SMG5
C2orf73
FRMD3
DTX2
SIKE1
OSBPL1A
THAP7
ACADM
ZNF69
EPHA7
DNAH12
HMGN3
NOTCH2NLB
GFM1
LAMTOR5
EVL
OR6B2
NDUFA10
MRPL34
DDA1
ABHD8
MRM1
DHRS11
ENOSF1
CLK4
SLC5A10
TSEN34
SINHCAF
EEF1A1
TRAPPC6B
PNN
POMZP3
ST3GAL4
PLEKHG3
MAPT
GNG7
TENT2
TCF7L2
RAB11FIP2
PELI2
MPZL2
CASD1
FMC1-LUC7L2
FMC1
DCAKD
CLDN7
ZDHHC3
EXOSC7
USF2
DSG2
AGPAT3
BCKDK
ADRM1
RPS14
RNF135
CDC14A
ARHGEF33
CCDC200
KRIT1
ANKIB1
HSPA6
ZNF76
PRELID3B
MOG
PRPSAP1
CD320
AMER1
RNASE1
POLR2B
NOA1
TPD52L2
ABHD16B
UFSP1
ACHE
OSR1
DYM
ZNF891
ZNF10
PSMD14
SQSTM1
DNAJB1
S1PR2
TECR
CRNKL1
CFAP61
CLDN4
MYOZ3
LRRC59
NLRX1
RNF168
SPTBN4
BLVRB
CALML5
DYRK2
SYCP2L
GCM2
HNRNPLL
CCDC9
SNRPD1
TACC2
TMEM209
SSMEM1
WARS2
DTNB
RND3
FEM1A
MRPS18B
ATAT1
STAT1
SCNN1A
LTBR
POLRMT
FGF22
EFS
IL25
HUS1
CORO1A
PNKD
TOE1
MUTYH
SLC4A2
CDK5
ASIC3
NINJ1
NADSYN1
DHCR7
RINL
CLDN19
HEXIM2
ZNF484
PPEF2
SLC30A7
EXTL2
COP1
KIF20A
BRD8
WDR81
TLCD2
OSER1
TAF2
PRCP
DDIAS
ATP1B1
SEMA3E
VAV1
SH2D3A
CCDC130
YIF1B
KCNK6
PTBP1
NOD1
CYB5A
POLG2
DDX5
ZBTB45
SLC27A5
SNX3
PPM1D
ZBTB7B
ARHGAP35
LENEP
ELP6
SHPRH
TAF12
CCDC183
PRKCD
TEAD3
SRSF5
DENND6A
RABL6
ZNF572
SYPL1
SLBP
TMEM129
TACC3
SMG6
LGALS2
C2CD4D
RORC
PPP1R9B
SUPT7L
SLC4A1AP
STK32C
CCDC38
AMDHD1
RUFY1
MTFP1
KRT7
ADCK1
NUP85
HIBADH
NIBAN2
DCAF10
CTNNA1
DSC2
GOLT1A
TXNRD1
FOXJ1
OBP2B
PAK4
HMG20B
BMI1
COMMD3-BMI1
COMMD3
KLHL7
ANKRD50
AQP5
AQP2
GABARAPL1
GXYLT1
RBM15
HINT3
GCAT
H1-0
LTBP3
LZTS2
SIK3
CDK13
NAGK
CYB5R2
PAN2
IL23A
THUMPD3
GSPT1
TKFC
DDB1
HES4
BARX1
ZNF503
CBY3
CUL5
PPIL2
FASTKD2
ZNF506
TMEM53
ARMH1
POLR3B
RPS12
SPAG8
HINT2
MDP1
CHMP4A
R3HCC1L
CRY2
KHNYN
CBLN3
REL
MARVELD1
SYCE1L
MON1B
PNISR
STRAP
IDH3B
ALS2
ZNF675
PGAM1
CYP27C1
RNF19A
SMAD1
CCDC88B
FOXJ3
WDR43
SPEG
AGER
RNF5
AGPAT1
GIT1
ANKRD13B
DMAP1
HLA-E
KHDRBS1
GSE1
UQCRH
LRRC41
KIF22
ITGB3BP
EFCAB7
NR4A1
PLPP2
NDUFV2
ZNF335
RABL2B
RABL2A
PSMD1
MAPKAPK5
NME6
RWDD1
CACTIN
POLR3F
DZANK1
IPO13
DYNC1LI2
VDAC2
PSMG2
CEP76
FAM187A
EFTUD2
CCDC103
HSPA9
POLR2E
GPX4
NVL
VTI1B
NUP205
RPL21
GOSR2
TBCK
AIMP1
REXO1
MRPS7
MIF4GD
GGA3
DCTN1
EXOSC5
BCKDHA
ATP5MG
C19orf48
HADHB
HADHA
STAM
SRD5A1
TSNAX
NNAT
BLCAP
SKP1
FARSB
PES1
LYRM4
FARS2
SLC35B1
UPF2
TSN
NDUFA4
ZNF576
IRGQ
ACTR10
PNO1
PAK1IP1
C6orf52
LOC102724770
DGCR6
CAPRIN1
RBBP5
DPH6
PSMD12
COX7A2L
GOLGA5
RPL35A
IQCG
TTC8