ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039039 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◣ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RABL2B
ZNF335
RABL2A
DYNC1LI2
PSMD1
PSMG2
CEP76
CACTIN
DUSP29
NME6
IPO13
MAPKAPK5
POLR3F
DZANK1
TAOK3
SUDS3
FAM187A
EFTUD2
CCDC103
NVL
NEUROG3
DPH6
VTI1B
NUP85
VDAC2
DCTN1
RPL21
C19orf48
HSPA9
TBCK
AIMP1
NUP205
S1PR4
NCLN
STAM
GOSR2
MRPS7
MIF4GD
GGA3
TSNAX
RWDD1
SKP1
POLR2E
GPX4
CDX2
HADHB
HADHA
STAM2
TTC8
ATP5MG
PNO1
SLC35B1
SEC61B
ALG2
ZNF576
IRGQ
MRPS5
RPS23
ATP6AP1L
DUX4
SRD5A1
PAK1IP1
C6orf52
ZNF503
CDCA7L
SMC2
NNAT
BLCAP
UPF2
TSN
FARSB
RBKS
BABAM2
VARS1
PDAP1
BUD31
CAPRIN1
DLX4
NEUROD1
SUPV3L1
SFI1
EIF4ENIF1
REXO1
PES1
ACTR10
COX7A2L
EXOSC5
BCKDHA
ZRANB2
LYRM4
FARS2
TMED1
SELENOF
HS2ST1
GOLGA5
FGFRL1
RPL35A
IQCG
LMLN
FAM104A
C17orf80
TM9SF1
IPO4
TSSK4
FZD8
USP1
PI4KB
PSMD12
RBBP5
ICE1
HSPA1B
MRS2
ADK
AP3M1
WDR6
NDUFA4
FRG2C
PTGES2
RPS27A
CLHC1
INSM1
PAF1
DLL4
COMMD1
CCT4
VEZT
FGD6
NEUROG1
MUC20
SART3
ISCU
PALM2AKAP2
PDE6B
RPS12
UFM1
RABGGTB
DNAJB7
XPNPEP3
ST13
ANAPC7
PIP4P1
OSGEP
APEX1
PCBP1
ATOH1
C6orf47
APOM
BAG6
PROSER1
NHLRC3
RAB11B
DUSP6
DNAJB8
ECEL1
NFKBIL1
DDX39B
ATP6V1G2
SF3B3
COG4
ST18
NKX2-3
DAPL1
MYRIP
RBL2
SHB
POP5
HESX1
FOXC1
GALNT10
HES1
FRAT2
PIN4
STK36
RNF25
EIF2S3
RPS29
LRR1
ID3
MBTPS1
TAF9
RAD17
AK6
FRG2
LPIN1
LEFTY2
ANKRD1
DENND1A
SEC11C
UNCX
PNPLA1
PMAIP1
GBX1
ARHGAP11A-SCG5
ARHGAP11A
CDH18
LIG3
GADD45GIP1
EHF
LOC102724770
DGCR6
CALM2
KLF17
SUCLG1
OR6B2
NDUFA10
ZNF608
IL23R
BNIP3
TPRA1
MCM2
NXPH4
ZNF664-RFLNA
ZNF664
CCDC92
CERKL
GADD45G
SKIL
UBE2I
RPL7
RDH10
TLE2
PAX8
RBPJ
PCBD2
TCP10L
CNTLN
AEN
ZNF585B
ZNF383
SCIMP
NCOR2
GATA4
OPA3
BCOR
MSX2
MRTO4
EMC1
PDHX
APIP
KHDRBS1
TMEM70
ELOC
PAH
ASCL1
MBNL2
PHLDB2
ACOT2
AMOT
GORAB
NEUROG2
FAM151B
MAL
TIGD1
EIF4E2
GTF3C4
DDX31
DTNB
MAGEA11
COCH
SMAD7
NKIRAS1
NR1D2
RAB17
UPF3A
KDM6B
MLH1
EPM2AIP1
TVP23C
ALKBH5
BMP7
HCRTR1
GJA10
C5orf63
TMPPE
GLB1
IL17RD
ARHGEF38
ICMT
HES3
SLC22A24
CNPY2
GSR
CDC73
RAD54L2
ZBTB38
SYBU
RPN1
MYSM1
ZGPAT
ARFRP1
ZNF649
OAZ3
MRPL9
SYT12
LYPD6B
DMBX1
AXDND1
PRUNE2
APLN
CCDC200
NKX2-6
USP44
MBD2
ZNF592
CA5A
BANP
HOXB1
ZNF652
C15orf61
HEY2
PPP1R2
MARCO
CERCAM
CHN2
CPVL
CCDC85A
SLAMF1
GPR108
TRIP10
PKIB
LDLRAD4
KCNN4
SPCS1
GLT8D1
PLA1A
BICRA
FXYD2
ANKLE2
DSCAML1
SRSF11
LRRC40
SCAMP4
ADAT3
ETFDH
C4orf46
RAN
DUSP4
CHST12
MACROH2A1
USP17L21
USP17L20
USP17L12
USP17L13
USP17L11
USP17L18
USP17L10
CABIN1
PRDM14
RPP25
STK38
AFG1L
USP17L22
NFATC1
FZD10
MS4A4A
MEOX1
ZNF397
EYS
PTCH1
CLEC10A
TMEM242
TFAP2A
HNRNPA2B1
CBX3
CAV3
GATA3
CNTN4
INKA2
RGS19
OPRL1
LKAAEAR1
KIF21B
ELF3
RSPO4
OTX1
NOG
ATP6V0A4
KCNK2
BTNL9
FRMD7
BAMBI
HEBP1
FOXA2
TRIM65
MRPL38
SNX1
CIAO2A
TBC1D8
HECA
LYPD1
FAM118A
PCDHAC1
FOXP2
GBX2
SEC22B
PPP1R35
ZCWPW1
MEPCE
DDX3X
PDE12
STIL
SYNE2
MTRNR2L1
RPH3A
CLDN15
FIS1
EFEMP1
SLC40A1
ZNF850
CFAP126
RGSL1
HAND1
ERLIN2
HNRNPD
JAKMIP1
OLIG3
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
MIER1
DNAI4
NSUN4
METTL11B
BUB1B
RYBP
HIC2
NFE2
DIRAS1
ARHGAP28
LRMDA
HOXA3
HOXA2
NCOA2
TTC13
ACKR3
GRHL2
RBBP8NL
PLEKHA5
CERS2
ANXA9
C10orf53
SOX14
HOXA1
H2BU1
H2AW
LIN28A
NTAN1
SLC12A3
GPC6
NDUFV2
TYRO3
C6orf163
STRADA
LIPC
USP17L17
USP17L15
CCND3
MAST2
SLC16A12
TCHP
HAPLN1
SSPN
MINK1
IGF2
TAS2R9
TAS2R8
TAS2R7
RARA
DLX6
ZFAND3
TMPRSS7
BTBD3
CYP26A1
ZNF746
USP17L19
TMEM275
ST3GAL2
SGK1
CDS1
MID1
ANO1
RUNX1T1
NFIC
SYT7
RNF32
SDK1
CADM3
MNT
CHKA
CD101
TVP23B
CHPT1
FANK1
SNAPC1
UNKL
C16orf91
TLE5
PDCD2
VENTX
UTF1
CCDC172
TMCC3
H3-3A
PPP1R1B
PRSS22
ACOT1
NEUROD2
MEIG1
DCLRE1C
METTL24
CEMP1
PDPK1
TBL1XR1
YAP1
OSCAR
NDUFA3
HSPA1L
HSPA1A
FOXF1
ZNF90
PXMP2
POLE
BTF3
KAZALD1
CCL26
KLF6
CECR2
NAGLU
LCOR
OPLAH
ZNF436
RIMS2
ETS1
RBBP7
TRAP1
ZNF853
TNS3
CXXC4
ZNF891
ZNF10
GALNT8
PCLO
ZMIZ2
ZFP37
FDFT1
KAT6B
CCDC33
BRWD3
ARL14EP
LIPK
PRDM10
PRDM12
TEX46
KDM1A
TENT4B
RPS10-NUDT3
RPS10
EIF4H
LEF1
SLC25A6
MATR3
HOXB9
STAT1
ADGRA3
CHD8
MTCH2
EN1
CD99L2
ZNF138
FAM234B
CCDC169-SOHLH2
CCDC169
TMEM185A
NAV2
PTPRE
RIMS1
ZNF81
CENPBD1
SPIN1
TIPIN
PRSS8
OTP
KCNJ4
APBB1IP
FAM53B
PTPRG
CLDN9
CLDN6
SP7
CCDC88C
CCNDBP1
CEMIP2
TEAD3
BAZ1A
HINT1
SLC2A6
VIP
ZNF740
CSAD
ID1
STRA6
LIX1
SLC39A7
RXRB
HSD17B8
COL11A2
CBX4
BUB1
STON1-GTF2A1L
FAM89A
WNT3
PODXL
ASB6
FAM24B
FAM120B
DLL1
TNFRSF19
PAX7
SMUG1
TMEM167B
COMT
UBE2D2
TXNRD2
FTL
BAX
AGO1
GARS1
GOLM1
TRIM45
LHX1
MACROD2
TPO
SEL1L2
SYTL1
SUCLG2
ORMDL3
GSDMB
GNG4
CNOT2
ZBTB25
ZBTB1
ERI1
ALDH3A2
TRIM56
PLAGL1
RXRA
PHACTR2
RPS24
POLR3A
TNRC18
GAGE10
GYG2
OR13A1
DUSP12
CDX1
BCAT2
RASL10B
UPK2
NELFA
SEC14L1
PRSS47
MUC3A
RIT2
SHBG
FXR2
YTHDF2
GC
SEMA3C
EVC
EVC2
PKNOX1
PELI2
ZNF296
GEMIN7
KIF26A
BTG1
FBN2
DHRS3
AHSP
SMARCA4
ZNF552
SH2B1
CITED2
SERTAD2
VIPR2
ASS1
NFAM1
SYDE2
FREM1
ZFP64
SERPINA1
ZNF292
ANKRD28
PARP16
CASC3
HOXB3
HOXB4
HOXB5
PRODH
LOC102724788
RARB
MTRNR2L2
MSH3
DHFR
ARF1
HOXA4
WNT1
SOAT2
IGFBP6
SP2
MTRNR2L8
GLRA1
SPATC1L
ARID3B
LARP7
EAPP
ARHGAP10
ID2
NR2F1
G6PC2
IER3
FLOT1
NDUFS7
ZNF775
ZP4
SERINC5
TMEM107
ZSWIM1
SPATA25
NEURL2
RAB11FIP1
CBFA2T2
IGFBP2
DPP9
LZTS1
TBL2
ERCC1
ZFHX4
TPM1
BHLHE40
BBS9
LBX1
CTSA
FOXP1
ERRFI1
DDAH1
VSIR
TLE4
TTI2
TLE3
HOXA5
TBX3
ARHGDIA
PHC2
ASB2
WDR74
STX5
P4HB
NBEAL2
CCDC12
TEPSIN
NDUFAF8
FAM222A
DNM2
ARHGAP24
ARID3C
TAF12
FGF19
SP1
NHS
S100A10
URM1
FBXO31
NPAS4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PHOX2B
MAP1LC3B
PPP6R3
FILIP1L
DCTN3
H2BC17
H2AC17
CCN1
PDE4D
EXOC2
PDHB
TBX2
CALCOCO1
RPL22
RNF207
RAB5B
PMEL
CDK2
HPCAL1
E4F1
SMAD3
MAMDC2
CNTN1
ZFHX3
ANK2
MRPL34
DDA1
ABHD8
PKDCC
NFIA
CLGN
STX18
ARHGEF28
FRA10AC1
HOXC6
FABP7
CAMTA1
FRYL
TLE1
STAP2
SYTL3
ITGB6
KANSL3
FER1L5
CRABP2
OTUD7B
TMEM120B
PCGF1
PPFIBP2
DONSON
DOLPP1
AQP6
KDM2B
PGK1
ABLIM3
BAZ2A
SYNPO
ATF6
MAB21L2
COL23A1
POR
MSX1
HUS1
EXOSC4
SH3BP2
JUP
MFSD10
PRRX1
SMPDL3A
ARHGAP22
SEPTIN9
MRPL20
PPCDC
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
XKR7
PTK2B
SQSTM1
LBX2
KCNAB2
ARRDC4
SHC1
TRIB1
RING1
MYLK4
DYNLT1
PDZRN3
MEIS2
CCNL2
ARSG
ABCC10
IRF2BP2
SREBF1
MBNL3
ADAP1
ZNF687
ATP5F1B
RFX1
CLCN3
ABHD2
BAIAP2
CS
MTMR4
LFNG
TMEM9
SMG6
MALRD1
DACT2
GPCPD1
PANK2
NBPF1
ZFP36
PLEKHG2
MIDEAS
MRPL3
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
ZNF367
PCGF2
CCDC174
TOP2A
RASSF5
SLC2A9
SPG7
PSPN
ALKBH7
SOCS3
SIRT4
NOL4L
EIF1B
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
MRPS31
FURIN
NUBP1
THOP1
SGTA
DLG2
ANGPTL4
RHOQ
ATP6V1E2
PRKAG2
PCNA
ITGAV
RPL34
CRYAA2
CRYAA
NFKBIA
NOTCH2
SMARCD2
RPLP1
ASXL3
ARHGAP30
SACM1L
IQSEC3
HEXIM2
SMIM28
NR2F6
RNF103-CHMP3
RMND5A
DNAH1
DCAF11
ZFAND2A
PDE4DIP
TRIM26
SSBP4
BMF
NAV3
CDS2
ARRDC2
OSBP
NLK
GRIK2
ATP1B1
GPR20
SHF
EIF2AK3
SKI
ZNF77
STIP1
CSF3R
HNMT
HMGCS1
SOD2
AHDC1
SERPINE1
LRATD2
STARD13
CLDN11
ART1
TRIM7
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
SLC45A4
CAPG
ME3
KNL1
BRMS1
QPRT