ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX21236746 | IMR-32
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◣ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

RWDD1
NUP85
FAM187A
EFTUD2
CCDC103
PSMD12
ZNF335
HADHB
HADHA
GOSR2
MRPS7
MIF4GD
GGA3
TAOK3
SUDS3
RABL2B
POLR3F
DZANK1
RABL2A
TSN
NVL
RPS12
NNAT
BLCAP
MAPKAPK5
CACTIN
PAK1IP1
C6orf52
RBBP5
POLR2E
GPX4
RPS27A
CLHC1
VTI1B
SLC35B1
EXOSC5
BCKDHA
TSNAX
PNO1
REXO1
NME6
ZRANB2
S1PR4
NCLN
NUP205
SART3
ISCU
RABGGTB
DCTN1
LYRM4
FARS2
FAM104A
C17orf80
USP29
PSMD1
COX7A2L
VARS1
HSPA9
C19orf48
SELENOF
HS2ST1
PI4KB
PES1
SEC61B
ALG2
STAM
OAZ3
MRPL9
GOLGA5
RPL21
VDAC2
COMMD1
CCT4
RPL35A
IQCG
LMLN
TMEM101
TMED1
UPF2
FARSB
DNAJB7
XPNPEP3
ST13
TTC8
NDUFA4
PSMG2
CEP76
ATP5MG
SUPV3L1
TBCK
AIMP1
USP1
ZNF576
IRGQ
MRPS5
DYNC1LI2
C6orf47
APOM
BAG6
SMC2
ACTR10
UFM1
IPO13
CAPRIN1
ANAPC7
DPH6
SRD5A1
STAM2
ATP6V1G3
PCBP1
RPS29
LRR1
PROSER1
NHLRC3
CD24
RPS23
ATP6AP1L
HSPA1B
LOC102724770
DGCR6
ETAA1
SUCLG1
NFKBIL1
DDX39B
ATP6V1G2
PAF1
CDC73
SFI1
EIF4ENIF1
DUX4
GMEB2
CRYBG3
ICE1
PDAP1
BUD31
MMD
GAMT
ADK
AP3M1
ATP1A1
STK36
RNF25
RBKS
BABAM2
TAF9
RAD17
AK6
MLEC
RPN1
UNKL
C16orf91
PIN4
SKP1
UBE2I
CERK
RPS10-NUDT3
RPS10
PIP4P1
OSGEP
APEX1
GORAB
OR6B2
NDUFA10
ZBTB18
BICRA
NRXN1
SEC11C
SF3B3
COG4
PTGES2
TRIM65
MRPL38
KIF3B
SLC35A3
LIMA1
GTF3C4
DDX31
XXYLT1
PCGF1
LBX2
TLX2
MRTO4
EMC1
NBEA
MAB21L1
BDNF
PCGF3
ARHGAP11A-SCG5
ARHGAP11A
METTL24
ZNF585B
ZNF383
CCDC43
GADD45GIP1
KIAA0319
RFX8
IFI44
AXDND1
CDH2
SNRPD2
QPCTL
IGFBPL1
MYLIP
APBA1
ALKBH5
NFATC4
TM9SF1
IPO4
TSSK4
LRRC43
IL31
CDH7
AQP6
RABGAP1L
UBAP2
SMLR1
RUNX1T1
NPTN
RPS24
POLR3A
RPL7
RDH10
CBFA2T2
DUSP12
ANO3
BAHCC1
TSHZ3
SPCS1
GLT8D1
AKNAD1
MTRNR2L8
CDON
NHLH2
ANK3
GBA
PKN2
DOCK10
PRRT2
MAZ
EYS
PAGR1
MVP
EIF4H
KAT7
TIAM2
CHN1
PLSCR5
SRSF11
LRRC40
LY75-CD302
LY75
CSRNP3
SUN1
EAPP
DHX8
SSH1
CHD8
NELFA
WRAP53
TP53
EIF2S3
MAST1
RTBDN
MYCN
PHOX2B
IDI1
LAYN
TLE3
SYBU
LRRC56
HRAS
PTPRO
KREMEN1
CNPY2
TLE4
FRMD6
JDP2
RPL36
MICOS13
HSD11B1L
SLC17A6
DNASE1L2
ECI1
TSHR
GK2
IZUMO1R
TCHP
HSD17B1
COASY
MGARP
RARA
PPP1R35
ZCWPW1
MEPCE
KIAA1549
SH3D19
DLC1
CBX5
R3HCC1
TOMM20
RFX2
OPRM1
CLTC
LEMD2
NRP1
EGFLAM
RNASEK
ALOX12
C8orf48
RARB
ADCYAP1
GTF3A
RBM25
CS
F7
PELI2
MAN2C1
ANKLE2
MLLT11
CDC42SE1
PARP16
RUNDC3A
EBF3
GRK5
GATAD2A
TBC1D16
DACT1
CCDC40
ACVR1C
CCDC200
DDX1
WDR7
OMD
TNFRSF19
LRCOL1
P2RX2
DGKZ
BAZ2B
PTPN3
KRTAP3-2
KRTAP3-3
KRT40
SIRT4
HSPE1-MOB4
HSPE1
HSPD1
CLASP2
CD79A
ARHGEF1
FOXP2
FAM162A
CCDC58
ACVR1
HNRNPA2B1
CBX3
TCF4
ABCA12
YTHDF2
FLRT3
RRM2
ELAVL4
NEUROD1
MAD2L1BP
GTPBP2
RSPH9
NAV2
ACOT11
CERKL
SOAT2
IGFBP6
TIMM10
SMTNL1
ZNF521
CEP85L
MTMR14
DYRK1B
DENND1B
CMTR1
H3Y2
SATB1
SETD5
SLC24A1
INTS14
NRG1
RNF111
SLC26A1
IDUA
CLVS1
MAD2L2
DRAXIN
FGD4
ZNF217
VMP1
PTRH2
TANC1
DR1
MTF2
SMAD5
MDM1
ONECUT3
GSTP1
DBNDD1
MAMDC2
SYNPO
PDHX
APIP
GRIP1
FAM43A
GGA1
LTBP4
TRIM67
CDYL
CIPC
SLC26A11
SGSH
TMEM210
LRRC26
MLF2
IL26
IL6ST
CNNM2
CEP120
LIG3
HTR1F
SPATA4
HEPACAM2
VPS50
ACTA2
UFSP2
C4orf47
MTHFD2L
MARCHF7
QRFPR
COX7A2
CCDC192
ZCCHC4
GOLGA8Q
HUS1
EFCAB2
GRAMD1B
FRZB
FRG2C
SCHIP1
TMEM91
B9D2
DNAH8
INKA2
SMIM41
ATG101
PAXBP1
TAS2R40
SSNA1
ANAPC2
B3GNT3
CDK15
TCP1
MRPL18
RAB27B
PPP6R1
MGP
TMEM38A
SMIM7
SMARCD2
RNF34
NCAPG
CCDC113
PHB
PCBP2
ATF7IP
RPS7
ZNRF3
LOC100505841
H3Y1
TBC1D24
SECISBP2L
LYSMD2
SLC6A2
TEDC2
SCAF8
NTN3
TMOD2
CYTH3
CCDC174
PRDM10
MBD6
DDIT3
TSPAN11
MTRNR2L2
MSH3
DHFR
UROD
HECTD3
BAIAP2
TPCN1
AFF3
SMAD7
B9D1
MFAP4
MAPK7
PANK2
BRD4
ARL14EP
APLP1
ARID2
CD248
PWWP3A
USP9X
SEMA6D
SLAIN1
CACHD1
CHRNA3
GULP1
TRIM2
CTDSP1
FABP9
ELAPOR1
C1orf194
PMP2
ZNF331
FBXO10
VIP
FYN
ARIH1
ZNF121
GOLGA8R
TMEM107
PLEKHA6
SF3B2
GAL3ST3
CYB561D1
ATXN7L2
TXNDC11
DNAJC15
SEPTIN6
THBS4
MTX3
FAM110A
HEXIM2
KDM3A
PPP1R17
SLC25A10
MRPL12
UQCRC2
DLG4
ACADVL
KIAA1217
CASK
CAPNS2
EML2
SORBS2
PPP1R11
POLR1H
SESN3
ITPR2
ZNF496
BRWD1
IER5
NUDCD3
KCNT2
STAT3
PRPF3
TMEM244
C8B
ZFP36L1
TMEM127
CIAO1
USP32
NCBP3
SPATC1
CAPRIN2
PKIA
IRAK1BP1
QPRT
PARP2
CCNB1IP1
LGSN
BROX
AIDA
BMF
CCDC68
SERTAD3
ZPLD1
ACYP1
ZC2HC1C
PDGFRA
PRKCSH
CCDC151
TMCC1
MAP1B
RAD51D
FNDC8
KCNV2
ZNF608
TUBB
MDC1
IGF2BP3
PAN2
IL23A
TNPO2
NMRK2
COL23A1
PFKP
MYT1L
ZNF444
LARP7
CALM2
RPS26
COPS4
DUS1L
ZNF787
NRP2
NKIRAS2
DNAJC7
SLC25A25
NAIF1
ARMC12
FKBP5
SLC25A28
RPRM
SPHK2
NOCT
RPL18
FAM83E
RPL26
KRBA2
HMGB1
ADGRL2
RAD23A
CALR
USPL1
FARSA
DVL3
ZSCAN12
GFRA2
MSRB2
ZBTB26
RABGAP1
NET1
NOP14
GRK4
NME1-NME2
NME1
POLL
DPCD
C9orf92
TRDMT1
GIT1
ANKRD13B
WDR74
STX5
TLN1
CREB3
CDC42EP2
ELF1
WBP4
DRAP1
C11orf68
PRPF40B
PRR14
FBRS
NUCKS1
PRICKLE1
EPHA7
CHGA
TMEM259
CNN2
RUNDC1
PTGES3L-AARSD1
PTGES3L
FAM222B
LDLRAD4
SKP2
LMBRD2
TLX3
EBF1
RAD52
TMEM167B
CTBP2
PRDX2
RNASEH2A
CIC
BAZ2A
PDZRN3
ATP5F1B
HPF1
OCA2
PCBD2
ZNF397
ACTB
MARCHF11
FER
LDB3
ZMYM2
ARL10
KIAA1191
SOX11
SLC29A4
B3GALT2
PITPNB
RBMS3
RFTN1
NEFH
PDE12
ZNF76
ZBED9
ST6GALNAC2
PDE6B
PRCD
CYGB
SAMD10
PRPF6
ADRM1
NCAM1
NFIB
UBB
SMIM18
POLDIP3
TMEM60
PHTF2
DST
TBPL1
UBE2Z
BEND6
ZSWIM1
SPATA25
NEURL2
CTSA
MRPS23
MAP3K3
RGS14
LMAN2
FNTA
RAB30
CROCC
PANK3
SOX4
FBXW7
PLEKHG7
H4C12
H4C11
H2BC15
H2AC15
SSBP3
LOC101929372
ALMS1
RBM4
ASF1A
TMBIM4
PRPF8
RCOR1
TNFSF18
CCKAR
PSME3IP1
RSPRY1
PARP9
DTX3L
TAF12
TMEM205
RAB3D
CCDC159
TRAP1
PRPSAP1
CDKN2AIPNL
MON1A
RBM6
OGFR
PLPPR2
ZNF629
SDCCAG8
CEP170
SNX9
HNMT
ARHGAP19
COPS7A
OAZ1
RPS27L
RALYL
ZDHHC4
TOB1
C6orf89
SH2B1
PNPLA1
ID2
CCDC59
CELF1
GTPBP6
POLG
SRSF2
MFSD11
PKM
EIF4A3
DIS3L
CCDC196
STK32B
NHLH1
SACM1L
NAP1L1
PRKAG2
KHK
EMILIN1
OST4
CDIPT
GTF3C5
HCFC2
GLT8D2
CKAP4
CHD9
SLIT1
H1-10
RTP5
FRG2
C3orf52
PTPN6
C12orf57
IFI35
TYRP1
RPL27
RPAIN
NUP88
C18orf25
KRTAP10-5
KRTAP10-4
NREP
MCC
GARNL3
MCL1
CLIC4
CCDC178
DNAL4
GPR88
WDPCP
MDH1
HNRNPD
GAA
ID1
SDE2
TP53BP1
MAP1A
TMEM94
NUMA1
LRTOMT
PTPN13
TWIST1
TCAF2
FBXO22
MMP20
CST6
EIF1AD
BANF1
SDHAF4
TOB2
DDX23
SLC16A3
DCLRE1B
AP4B1
SEZ6L2
ASPHD1
AFAP1
RACK1
LNPEP
LIMS1
SRP9
XKR7
PMEPA1
EFNB1
SLA
SLC25A6
CDC42EP3
SRGAP3
SFXN2
ARL3
BLOC1S5
ZNF503
MTRNR2L1
NEUROG2
ZGPAT
ARFRP1
PPP1R1B
NEUROG3
HES1
HOXA3
ARF1
ICMT
HES3
HOXA4
WNT1
HOXA1
DUSP29
CDX2
SP2
MBTPS1
SKIL
DHRS3
ARID3B
GLRA1
SPATC1L
CYP26A1
VEZT
FGD6
SNAPC1
FZD8
ARHGAP10
NFE2
NR2F1
PLAGL1
PMAIP1
G6PC2
IER3
FLOT1
CCDC33
HOXA2
PALM2AKAP2
H2BU1
H2AW
DUSP6
NDUFS7
ZNF775
MUC20
ZP4
SERINC5
KCNN4
NEUROG1
ATOH1
RAB11FIP1
KAT6B
IGFBP2
DPP9
LZTS1
TBL2
ERCC1
ZFHX4
BNIP3
GPR108
TPM1
BHLHE40
LEFTY2
BBS9
TRIP10
LBX1
CDH18
FOXP1
ERRFI1
DDAH1
VSIR
HOXB1
TTI2
LIN28A
ST18
HOXA5
TBX3
ARHGDIA
PHC2
TLE2
INSM1
ASB2
ETS1
ZNF746
P4HB
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
LPIN1
DNM2
DAPL1
ARHGAP24
ARID3C
FGF19
TPRA1
PAH
MCM2
CITED2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
HOXB3
NHS
S100A10
URM1
FBXO31
NPAS4
DLL4
RHBDD3
EWSR1
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PRUNE2
MAP1LC3B
SYTL3
CRABP2
PPP6R3
FILIP1L