ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4671314 | SUM 159PT
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◣ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

SNAPC1
EAPP
WDR74
STX5
MTRNR2L1
CCDC200
FRG2C
MTRNR2L2
MSH3
DHFR
POLR3E
DUX4
VSIR
SHF
ART1
BRMS1
B4GAT1
PPP6R3
KNL1
ID1
POLG
DPP9
DHRS3
SACM1L
PRMT5
TBL1X
FRG2
FCGR3A
FBXO31
MAP1LC3B
LUC7L2
FMC1-LUC7L2
FMC1
LTA4H
ZBED9
COL23A1
GSTA4
TRIM7
TAF12
NDUFS7
STRA6
RAB11A
PSMA3
C8orf37
PLXDC1
MACC1
H4C8
MAMDC2
MPZL1
SIT1
CCDC107
ARHGEF39
SOAT2
IGFBP6
HSPA6
MTRNR2L8
H2BC17
H2AC17
OR2B2
H4C12
H4C11
H2BC15
H2AC15
ELF1
WBP4
PHRF1
RPS29
NPR1
ILF2
NOP53
NCOA7
NEMF
ABLIM3
ZNF184
ATP1A2
TIA1
PCYOX1
BORCS6
HMGN4
RNASE4
ANG
FCGR3B
METTL26
WFIKKN1
TMEM242
TTI2
CFAP45
WSB2
SMARCC2
BCAR3
OR1F1
PTPRE
ANGPTL4
LOC102724770
DGCR6
RAD54L2
STAT6
GTPBP6
NME1-NME2
NME1
SNAI2
CCDC136
OPN1SW
STX16
PXK
CSRNP1
SIRT4
IER3
FLOT1
UBC
NUF2
PPEF1
RS1
PCGF2
FTH1
DUSP1
GTF2H2C_2
GTF2H2
MDM4
MYNN
ACTRT3
SCNN1A
LTBR
UBE2H
MTF2
ISLR2
NFE2L2
CYB561D1
ATXN7L2
ALOX5AP
POLDIP3
CASC3
EIF2D
PHLDB2
DRAP1
C11orf68
YARS1
S100PBP
CCL20
SERPINE1
DDIT4
FRA10AC1
H4C15
H4C14
H3C15
H3C14
H2AC19
H2AC18
TSEN15
OR2T1
PDE4DIP
ZNF839
TACO1
HEG1
HES1
FAM227B
DTWD1
ENPP3
MED23
BHLHE40
PRKAG2
TPCN1
TMEM167B
RPL37
CARD6
HIF3A
MRPL40
HIRA
CCNL1
ZNF827
TMEM259
CNN2
CCN5
TRIB3
TEFM
SNX18
STUB1
WDR24
JMJD8
SAR1B
METTL15
KIF18A
ZNF219
TMEM253
DPYSL2
GTF2H2C
SLC35E2B
PTPRJ
BCL3
TES
LRRC37A3
SMARCD2
TMEM262
SLC44A1
RBFOX2
ANP32E
USP30
MED16
ARID3B
OR6S1
CCDC80
BDKRB1
EIF4A3
MRPS35
TNPO1
JUNB
SOD2
WTAP
RUVBL1
EEFSEC
RPL22
RNF207
TEDC1
BCL2L1
CRIP1
MKNK2
SGCA
CRIP2
MRI1
C19orf53
KRT6A
UPK2
NUP50
HSPA5
PARP16
FZD2
TNFRSF10B
TRIB1
ATF3
PLD4
PCLAF
TRIP4
SYS1
DCP1A
PSMF1
NPIPB6
MRPS31
ARID1A
CPEB3
IRX2
C5orf38
C7orf65
BAZ2A
R3HCC1
ART4
POLR3B
TRIOBP
WDR36
ACSL1
MRPS15
TSFM
SRP14
IARS1
EPB41
FOXN3
OPA1
TMEM41A
KRT80
SPIDR
GPT2
TOB2
MAT2A
RTP3
LTF
IQSEC3
TXNRD1
PYGB
SNRPE
TMEM107
KANSL3
FER1L5
SLC35F6
MRPL21
IGHMBP2
INTS12
GSTCD
ARMC12
FKBP5
KRT8
PTPRH
DCAF10
ADGRG1
SLC17A3
ANO10
ABHD5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CD8A
ARID5B
TOP3B
ZNF296
GEMIN7
H1-2
CAMK2D
LRRC59
INO80C
SHISA4
ZFP36
PLEKHG2
GADD45A
CALM1
LAG3
S100A2
LPP
TNIP1
PLIN3
KLF9
PSAP
NDST1
MKRN3
TDG
C12orf73
H3C4
ZNF207
C17orf75
H4C4
RGPD8
RGPD5
H2BC6
NUP54
RGPD6
COMMD2
SNAP47
JMJD4
MYBPC3
HES7
ALOXE3
NR1H3
ACP2
TEX46
KDM1A
GBA
NDUFC2-KCTD14
NDUFC2
C8orf33
EPB41L4B
EIF3F
SYT8
SOST
PRKCE
STN1
ABT1
BCAR1
JUN
STX18
TMEM250
LASP1
CDKN2AIPNL
PHACTR4
OR6J1
PROSER1
NHLRC3
DDX1
GTF3C5
GTF3C3
C2orf66
ANKRD63
SH3BP4
DMAP1
NANOS3
SPRED2
ATF1
GRIK4
AMTN
STAG1
SPSB1
HMGB1
USPL1
GABARAPL1
ZMYND8
HTR5A
EXOC2
PECAM1
ELF3
GNA12
ARL8B
ZSCAN22
PLD1
DCLRE1B
AP4B1
CEBPB
BTG2
TMEM132A
ITGB3BP
EFCAB7
CALM2
PEX3
ADAT2
ZNF212
ATP5MC2
BEST1
SF3A3
MRPL39
EEF2K
CFLAR
DUS1L
KIF2C
TRIM55
DTNA
TAS1R1
NOL9
NDUFC1
NAA15
SUGCT
MPLKIP
PCBD2
AURKAIP1
KLF7
TLR4
RASSF5
CELSR3
COPS7B
PDE6D
MIDEAS
LDLR
ADAMTS9
TIMMDC1
TAMM41
FAN1
IGSF10
ANKRD39
RHBDL1
RHOT2
TEKT2
ADPRS
INTS1
TRIM8
LSMEM1
LRFN3
ARHGAP24
UQCRH
LRRC41
POFUT2
C18orf63
MKX
PPARD
TBC1D19
NPHP1
MTLN
RBBP5
PDE4D
AP3S2
PPARG
UNC45B
NLE1
NABP1
AHDC1
BZW2
NARS1
KLF15
DLX2
FLYWCH1
DLX1
SMG8
KRT83
HOXA3
HOXA2
NSUN4
LTBP3
WDR97
MAF1
CYC1
MAML3
STK40
VPS72
PIP5K1A
CCAR2
C8orf58
LSM12
G6PC3
ANKRD46
ZNF609
FUCA1
ATXN2L
ANXA5
IL16
XCR1
NEBL
TMEM248
SSBP2
NFKBIA
ZFP36L1
NSFL1C
NT5C
MRPS14
GMEB2
SIAH1
BCAS4
NSA2
GFM2
TLR2
MAD1L1
GABRE
SLC24A1
INTS14
FAM43A
POMZP3
NOXO1
VIRMA
SYNGR3
GFER
CTDSP1
MAP3K8
STMP1
DUS2
DPEP2NB
DDX28
LEKR1
H2BC14
H2AC14
SETD7
RIN3
LAMTOR5
ADGRF5
NOL4L
ARID2
THAP9
SEC31A
RBM28
ZSCAN25
C18orf21
CCDC33
TGIF1
HINT3
ZBTB45
SLC27A5
PLEKHA6
SRRM3
GBX1
AHR
BCOR
EIF4G2
SLC7A11
DDX47
SCNN1G
NPIPB9
OR1J4
OR1J2
USP17L21
USP17L20
USP17L12
USP17L22
CPE
C3
TM4SF1
H4C3
H1-6
NLRX1
NBPF1
MRPL3
FAM228B
ABHD12
SLC25A45
FRMD8
BCL9L
FUS
SF3B6
KDM4A
TP53I3
PLAT
WNT9A
H3C7
H2BC9
H4C7
PPP1R1B
TGFBR3
ZNFX1
C11orf91
LPIN1
TUBGCP3
CDK6
H3-3B
UNK
ZC3H12A
HSP90AB1
CUEDC2
PIK3R1
BCAT1
PSD
FBXL15
SLC2A9
SLC7A5
MAFK
PGRMC2
KDM3B
SAMD4A
STEAP1
LMO4
SRSF2
MFSD11
WNK4
VPS25
RWDD3
UBE2V1
GOT2
LSG1
RTN4
MRPS23
FAM53C
CDC25C
ABCG1
DIP2B
RRP15
ARHGDIA
P4HB
ABCC10
TRIAP1
COX6A1
TBC1D16
SURF6
MTHFD2
LIMD1
MRO
FTL
KPNB1
PSMD3
SLC33A1
ITPRIP
ZNF513
SNX17
EIF2B4
IGFBP1
MNAT1
ZSCAN12
ZNF461
CCND1
MOB4
CLK3
OR2V2
FIBCD1
TRDMT1
BCL11B
STK17A
PPA2
NCF4
THSD1
KDM2A
TAF3
FRG1
ACOT7
SPRYD4
MRPL44
GPN3
FAM216A
LFNG
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
MYO1G
CRTC1
AP5S1
VPS36
CKAP2
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
PSMA1
YPEL2
TSPAN14
AAR2
SLC7A4
SELENOH
ERCC1
RHOF
SETD1B
ANKMY2
AHCY
NCF1
SSRP1
P2RX3
MECOM
EGFLAM
MTREX
DHX29
VEGFA
SLC25A21
CA2
RAPGEF3
ETS2
CLUAP1
C16orf90
CRBN
PPL
PET117
KAT14
CDKN1A
HIVEP2
GTF2A1
OBSCN
RAD50
GYPC
ARL6IP1
PISD
ETV1
BRD3OS
ATF6
GPR19
PDE8A
DDX6
GGA2
PPP1R15B
IFIT1B
PTCD1
CPSF4
SRRM1
OXTR
CITED2
HNRNPD
ZDHHC4
MTOR
MLLT1
NUFIP2
YBEY
MCM3AP
FUT8
KMT5B
MEF2C
HBP1
PRRT2
MAZ
AARS2
ABLIM1
ARHGEF12
TTLL4
GOLGA7B
GALNT15
HNRNPA1L2
MRPL1
KRT86
NPAS4
UPP1
SUCLG2
TAB1
TATDN3
NSL1
CSF1
EPN1
MTERF1
LOC100505841
TMEM158
TOB1
MOGS
PDXK
MRPL53
MRPS2
C9orf116
SRSF7
ZNF843
TMEM184A
NDUFS4
POMK
SLC45A1
KDM6B
PIGV
PFKP
AMACR
PUM2
WIZ
PAFAH2
RPRD1A
THOC5
HERC3
RPS20
BRIX1
B4GALT3
SLC37A2
PYURF
PIGY
EGFR
TPRA1
MCM2
CARD10
ZFP91
LPXN
AMOTL2
SMN2
SMN1
MTHFD2L
SAAL1
DACT3
IFIT3
CXCL2
CALCB
HUS1
TCF7L2
NQO2
SCRT1
DGAT1
SH2B3
RNF216
RPL26
KRBA2
SLC25A3
NEK6
OLFML3
RAET1G
ARRDC2
CYCS
SLC35E2A
RSRP1
SERINC2
TMEM190
TMEM238
RPL28
BRF2
PTPN13
DAND5
ARHGAP22
SCHIP1
RXRA
BSPRY
DPAGT1
H2AX
HMBS
EIF3B
NUP188
DOLK
OXSM
NGLY1
NDUFAB1
LSP1
PSCA
SLC22A15
FAM98B
RPA3
ROR1
PMAIP1
SMAD3
STAT1
PARP2
SDC4
CCNB1IP1
CYP2W1
COX19
MTMR2
CTSB
IKBKG
VAPA
PPP2R5D
PEX6
BTF3
SKI
CCDC59
DYNLL1
GBE1
ESYT1
ZC3H10
RPL41
RAD23B
UGGT1
TRIM52
MUC5AC
CCDC40
TM2D1
ATOX1
NT5DC4
NKX2-5
ROS1
IL6ST
HSP90AA1
PIK3R3
MDP1
CHMP4A
LRRC2
SLFN5
LIMS4
LIMS3
SRP9
CABIN1
AFF1
ZBTB9
ATF4
MALT1
DSTYK
XPC
LSM3
EFNA3
TERF1
TAF4
C11orf49
PEBP4
IRF2BP2
PLEC
MCOLN1
ZC3H6
FOXS1
ZNF358
N6AMT1
FGF1
ALG10B
ADAMTS16
ZMPSTE24
OSMR
MSANTD3
TACSTD2
FIGNL1
DDX19A
KSR1
SEC16A
C9orf163
COX7A2
SLC37A4
ACSF3
GJD3
APOL6
IL1R1
TOX2
TRAM2
LOC644090
NDUFA12
WDR11
MRPS10
AGK
NIPBL
CYP27C1
BMPER
HPD
CAMTA1
BMF
NOL7
RER1
MORN1
PSMD9
CXXC4
ASH1L
SMG7
SPATS2L
CYP46A1
PACSIN2
RGS16
POLR2C
PCMT1
ARL14EPL
SRA1
WDFY2
SLC35A4
APBB3
EIF4EBP3
HAP1
TMEM40
TUBB4B
FAM166A
STPG3
CTNNB1
PHPT1
AJM1
MAMDC4
CAMKK2
UBL7
SDC3
LATS1
SLC38A1
BTG1
MTMR6
FCER1A
SRGAP1
KAT2A
HSPB9
DHX58
PPP1R18
NRM
GGA1
RAG1
MYL12A
TRA2B
PSMC2
DNAJC2
TRAF6
CDKN1C
ATG16L1
TXNIP
TCAF2
H4C9
SAMSN1
H2BC11
H2AC11
EIF4A2
EDC4
ANGEL1
AKAP12
CYP2R1
FBP2
TM9SF1
IPO4
SMIM3
TIMM44
SLC9A3R2
CST6
PDE11A
VRK2
EIF1AD