ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX3584312 | iPSC derived chondrocytes
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◣ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◢ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

DUX4
LOC102724770
DGCR6
PSMD1
TAOK3
SUDS3
ZNF335
RABL2A
RABL2B
NME6
POLR3F
DZANK1
CACTIN
MAPKAPK5
DYNC1LI2
NUP85
RWDD1
PSMG2
CEP76
VDAC2
MRPS7
MIF4GD
GGA3
DCTN1
HSPA9
TBCK
AIMP1
FRG2C
FARSB
FAM187A
EFTUD2
CCDC103
IPO13
ZNF576
IRGQ
RPL21
VTI1B
EXOSC5
BCKDHA
ZNF503
TSNAX
HADHB
HADHA
REXO1
POLR2E
GPX4
SEC61B
ALG2
STAM
C19orf48
SKP1
NUP205
GOSR2
UPF2
RBBP5
ANAPC7
STAM2
TTC8
S1PR4
NCLN
ARF1
LYRM4
FARS2
CAPRIN1
NVL
COX7A2L
PAK1IP1
C6orf52
PROSER1
NHLRC3
SRD5A1
RHBDD3
EWSR1
SUPV3L1
HOXA3
HOXA4
PNO1
DPH6
ATP5MG
ACTR10
ADK
AP3M1
PES1
SELENOF
HS2ST1
SMC2
PIP4P1
OSGEP
APEX1
NNAT
BLCAP
SLC35B1
RABGGTB
HSPA1B
TMED1
FRG2
WNT1
TLE1
PI4KB
RPS23
ATP6AP1L
RPS12
NEUROD1
USP1
MRPL3
SF3B3
COG4
ZRANB2
PPP1R1B
MRPS5
PDAP1
BUD31
RBKS
BABAM2
RND3
UFM1
ICE1
RPS27A
CLHC1
PSMD12
KITLG
SFI1
EIF4ENIF1
DMRT3
TSN
SART3
ISCU
RPL35A
IQCG
C6orf47
APOM
BAG6
NCOR2
ZNF608
COMMD1
CCT4
FZD8
MSX1
GRIK2
RPS29
LRR1
GOLGA5
FABP7
SMPDL3A
UBE2I
DNAJB7
XPNPEP3
ST13
PAF1
PLAGL1
G6PC2
CALCOCO1
SOGA3
ABCG2
ARHGAP22
LAMA4
MYLK4
NDUFA4
KCNK16
LZTS1
VARS1
PKHD1
MSX2
PCBP1
ZFHX4
SERINC5
RPL34
PARP11
BICRA
FGD3
RAB11FIP1
TM9SF1
IPO4
TSSK4
C1orf105
LAMB4
SH3BP5
OR6B2
NDUFA10
MUC20
HOXA5
PAM
SEMA4D
CABP7
PAX3
FGF19
EVX2
ARHGAP11A-SCG5
ARHGAP11A
FAM104A
C17orf80
GMPR
ARHGAP24
ANK2
DHRS3
ALDH1A2
SPRR1A
MYH2
DDAH1
CCN1
QPRT
PTGES2
SHF
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
USP17L21
USP17L20
USP17L12
USP17L22
KCNK10
POU2F2
NFIA
EIF2S3
MTRNR2L1
LRATD2
ACSS3
CCDC200
CBFA2T2
GUCY2C
RARA
SDK2
MRTO4
EMC1
SUCLG1
SGPP2
KBTBD8
LARP7
UNCX
SEC11C
PDE1B
PALM2AKAP2
CHODL
TRABD2B
SMUG1
TRMT9B
CACNA1D
CD69
PDE6B
TMEM72
CHD7
LRRC10
SPARCL1
SYNPO
GALNT14
TLE4
RFX2
ATOH8
WDPCP
HOXB1
CITED2
BRINP1
ITGB6
HOXB3
HOXB4
PIN4
HSPA6
FOXB2
USP17L13
USP17L11
USP17L18
USP17L10
COL17A1
C10orf90
CA2
TPO
GAS2L3
SKIL
PIGX
CEP19
HES1
NR2F1
NEUROG1
LRIG3
HMX2
BUB3
CEBPA
SMARCA2
ZNF775
MEF2C
WBP1L
PDHB
CLDN11
PDE1A
GNG12
PDZRN3
PDE4DIP
RPL7
RDH10
RGS3
TMEM120B
MED4
IKBKB
FRMD4A
CCDC198
SLC2A9
SLA
GTF3C4
DDX31
TRPM3
LMLN
NEUROG2
NFKBIL1
DDX39B
ATP6V1G2
ZGPAT
ARFRP1
RARB
NEUROG3
MTRNR2L2
MSH3
DHFR
OAZ3
MRPL9
MTRNR2L8
ICMT
HES3
PDE12
HOXA1
ID1
DUSP29
SOAT2
IGFBP6
CDX2
TAF9
RAD17
AK6
STK36
RNF25
SP2
EAPP
MBTPS1
ARID3B
GLRA1
SPATC1L
CYP26A1
VEZT
FGD6
SNAPC1
UNKL
ID2
ARHGAP10
GADD45GIP1
CDC73
NFE2
SYBU
C16orf91
PMAIP1
IER3
FLOT1
CCDC33
HOXA2
H2BU1
H2AW
TMEM107
DUSP6
RPN1
GORAB
NDUFS7
ZSWIM1
SPATA25
NEURL2
ZP4
KCNN4
SH2B1
ATOH1
KAT6B
CNPY2
IGFBP2
DPP9
TBL2
CTSA
ERCC1
BNIP3
USP29
GPR108
TPM1
BHLHE40
TLE3
TRIM65
ZNF585B
ZNF383
LEFTY2
BBS9
PCGF1
TRIP10
LBX1
AQP6
CDH18
MRPL38
SPCS1
GLT8D1
PDHX
APIP
FOXP1
ERRFI1
LBX2
VSIR
WDR74
STX5
PHOX2B
MAMDC2
TTI2
METTL24
LIN28A
ST18
RUNX1T1
TBX3
ARHGDIA
PHC2
TLE2
INSM1
ASB2
ETS1
ZNF746
P4HB
PPP1R35
NBEAL2
CCDC12
CDCA7L
TEPSIN
NDUFAF8
FAM222A
PCBD2
TAF12
LPIN1
DNM2
MLEC
DAPL1
ARID3C
TPRA1
PAH
MCM2
SP1
SLC39A7
RXRB
HSD17B8
TBX2
ANKLE2
COL23A1
ALKBH5
NHS
S100A10
URM1
FBXO31
NPAS4
DLL4
ADNP2
NCOA7
HOXC4
MINDY2
HPD
SP5
PRUNE2
TNFRSF19
MAP1LC3B
HUS1
SYTL3
CS
CRABP2
PPP6R3
FILIP1L
ANKRD28
DCTN3
H2BC17
H2AC17
RPS10-NUDT3
RPS10
COL11A2
TMEM70
ELOC
PDE4D
EXOC2
XKR7
FRA10AC1
RPL22
RNF207
RAB5B
PMEL
CDK2
FXYD2
HPCAL1
AXDND1
E4F1
SMAD3
CNTN1
KIF21B
CCNDBP1
ZFHX3
MRPL34
DDA1
ABHD8
PKDCC
BAZ2A
CLGN
STX18
ARHGEF28
CHN2
HOXC6
KDM6B
CAMTA1
FRYL
STAP2
ID3
CPVL
KANSL3
FER1L5
OTUD7B
ARSG
TMEM242
DLX4
BAIAP2
VIP
PPFIBP2
DYNLT1
DONSON
DOLPP1
GPC6
KDM2B
ARRDC4
ASB6
RPS24
POLR3A
PGK1
ATP5F1B
ABLIM3
SEPTIN9
ATF6
CERCAM
MAB21L2
ETAA1
FOXP2
POR
CERK
POP5
RBPJ
CADM3
SIRT4
EXOSC4
SH3BP2
JUP
NELFA
MFSD10
UPF3A
PRRX1
MRPL20
PPCDC
RARG
PC
NINJ2
RHBDD1
BCL3
KATNB1
PANK2
PTK2B
SQSTM1
KCNAB2
SHC1
TMEM101
TRIB1
CCDC174
RING1
MEIS2
SRSF11
ABHD2
CCNL2
ABCC10
IRF2BP2
SREBF1
MBNL3
ADAP1
ZNF687
SMARCD2
BMF
RFX1
CLCN3
SMIM28
MTMR4
LFNG
TMEM9
SMG6
KAZALD1
GATA4
ATP1A1
MALRD1
DACT2
GPCPD1
NBPF1
ZFP36
PLEKHG2
CNOT2
CBX5
MIDEAS
TRIM46
KRTCAP2
SLX1B
SLX1A
BOLA2B
BOLA2
NRL
C9orf92
ZNF367
PCGF2
RNF34
TOP2A
PRKAG2
CALM2
RASSF5
SPG7
PSPN
ALKBH7
TLX2
SOCS3
NOL4L
EIF1B
HSPA1L
HSPA1A
HEXIM2
INHBE
GLI1
ANKHD1-EIF4EBP3
ANKHD1
PPP1R18
NRM
MRPS31
HNRNPA2B1
CBX3
LRRC40
FURIN
NUBP1
THOP1
SGTA
SACM1L
RABGAP1L
KAT7
DLG2
TRAF7
ANGPTL4
DLC1
RHOQ
ATP6V1E2
PCNA
ITGAV
ECEL1
STAT1
CRYAA2
CRYAA
BAHCC1
NFKBIA
NOTCH2
RPLP1
ASXL3
ARHGAP30
IQSEC3
RAB26
POLDIP3
NR2F6
RNF103-CHMP3
RMND5A
HNMT
DNAH1
DCAF11
ZFAND2A
TRIM26
SSBP4
ZNF740
CSAD
PXYLP1
PRDM10
NAV3
CDS2
ARRDC2
ASCL1
GTF3A
OSBP
NLK
ATP1B1
GPR20
EIF2AK3
SKI
ZNF77
IL17RD
STIP1
RPS7
CSF3R
HMGCS1
PSMD6
SOD2
AHDC1
SERPINE1
STARD13
ART1
DSCAML1
TCP10L
TRIM7
HAND1
SLC25A25
SEPTIN4
ZC3H3
RAB37
ECE1
MDM2
GADD45G
SLC45A4
RAB11B
CAPG
ME3
KNL1
BRMS1
RBBP7
AGO1
ACYP1
CAPNS2
TRIB3
GADD45A
G3BP1
ZNF564
MYBPC3
LPCAT3
KMT5A
NCOA2
BORCS6
EVI5L
GOT1
SPRED2
KDM8
RTN4
PIPOX
MACROH2A1
CCL26
EMP3
FTL
SOCS2
ELL
SH2D6
CBX4
RGS12
HNRNPD
LMO4
RBM15
STX1A
TNFAIP2
POLG
METRN
COL21A1
CTSW
ADM
SLC35E2B
FAM107B
SMIM20
PDP2
TPCN1
TCTEX1D4
SLC7A5
PLK3
BTBD19
CRLS1
ZNF827
SYNJ2
GRSF1
B4GAT1
SCGB1A1
METTL3
LIG3
LMOD1
EVA1A
CORO1A
TCF7L2
HTR1F
MYRIP
MTF2
MBD6
DDIT3
MIDN
PNKD
METTL11B
RBFOX2
MNT
MYEOV
ZC2HC1C
CPSF4L
KBTBD11
MOB3A
IZUMO4
TRIM2
GLRX5
ANTKMT
NEK1
CP
CLDN9
PKN2
FST
DAGLB
JUNB
GMEB2
WSB2
SLC6A12
SCHIP1
HOXD3
LCK
FAM167B
TMEM94
PYGL
CSNK1D
NAIF1
PLA2G2A
BFSP1
TUBA1C
SEC22B
CNKSR3
IFI16
ARHGEF3
UBE2F
CCDC43
TMEM212
SHB
ETF1
ARAP1
KDM3A
INAVA
SORL1
NCDN
KIAA0319L
PRMT5
NEK3
MRPS28
EIF3D
TLN1
SLC30A4
CREB3
ARID5A
NKX1-1
IGFBP7
CNPY3
NKD1
TESC
MPND
UNC5A
NAV2
SH3YL1
ACP1
FLAD1
CKS1B
SLC19A1
H3C12
KIAA1549
ABCA4
SH3BP1
FOXA3
PCM1
SCARB1
BCAR3
DIABLO
PPFIBP1
CMSS1
TACC1
TXNRD1
SPOCK2
LINGO1
ARID4A
SORBS2
KLF16
FGR
LMNA
ZBTB18
SIT1
H4C15
H4C14
H3C15
H3C14
NAGLU
PLEC
UBC
LRRC45
CENPX
CYP51A1
COX5A
MRS2
SERPINB1
RGS5
RIMKLB
MMD
RNF144A
HNRNPL
METTL26
SNCG
MMRN2
ENPP3
PGP
SEC14L1
NRCAM
LRCH4
FBXO24
LNPEP
INKA2
MYO1B
SEBOX
ARID2
DMD
HMGB1
CHGA
UACA
BAX
NCS1
RXRA
RNPEPL1
DUSP28
ANKMY1
CEP41
NR1D1
CIC
FRMD3
NAA10
ARHGAP4
INAFM2
BOLA2-SMG1P6
RPS6KA1
RNF149
UGP2
NRXN1
ATP6V1G3
CSRNP1
PECAM1
ETFBKMT
ITGB2
KMT2A
LOC102724265
CAND1
ALOX5AP
LIMA1
FRAT2
KIF3B
CPT1A
C5orf63
SMIM22
ROGDI
DNAJB3
SCNN1A
LTBR
CCDC38
AMDHD1
OTX1
KIAA0319
IL23R
PHB
KIF5C
STX16
HNRNPAB
NDUFV2
PRR14
FBRS
CCDC59
NOXO1
CCDC107
ARHGEF39
MRPS24
ANKRD39
DMBX1
SLC34A3
TRDMT1
LAPTM5
ARHGEF10L
HOXC5
HTR5A
CREB5
TES
PHETA1
NEDD9
TSHZ3
RNF166
PHRF1
CTU2
KCTD7
EFEMP2
GATA6
TCHP
RAC1
PSMB5
ZBTB45
OPLAH
INSM2
EIF4H
PCTP
NKIRAS1
TMCO6
TDG
C12orf73
DRD4
MBD2
LTBP3
TEDC1
USP42
IRF2
STIL
MVB12A