ChIP-Atlas: Target genes

Potential target genes for RARA

Query protein: RARA
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6039041 | iPSC derived chondrocytes
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
RARA's Target genes

◢ RARA: Average

◢ SRX2748853: Adenoid cystic carcinoma

◢ SRX2748855: Adenoid cystic carcinoma

◢ SRX10442515: BE(2)-C

◢ SRX8814860: BE(2)-C

◢ SRX2635935: Hep G2

◢ SRX2635936: Hep G2

◢ SRX25244558: hESC derived endodermal cells

◢ SRX25244559: hESC derived endodermal cells

◢ SRX25244560: hESC derived endodermal cells

◢ SRX25244561: hESC derived endodermal cells

◢ SRX21236745: IMR-32

◢ SRX21236746: IMR-32

◢ SRX21236747: IMR-32

◢ SRX21236748: IMR-32

◢ SRX3584302: iPSC derived chondrocytes

◢ SRX3584303: iPSC derived chondrocytes

◢ SRX3584304: iPSC derived chondrocytes

◢ SRX3584305: iPSC derived chondrocytes

◢ SRX3584306: iPSC derived chondrocytes

◢ SRX3584307: iPSC derived chondrocytes

◢ SRX3584308: iPSC derived chondrocytes

◢ SRX3584309: iPSC derived chondrocytes

◢ SRX3584310: iPSC derived chondrocytes

◢ SRX3584311: iPSC derived chondrocytes

◢ SRX3584312: iPSC derived chondrocytes

◢ SRX3584313: iPSC derived chondrocytes

◢ SRX6039037: iPSC derived chondrocytes

◢ SRX6039038: iPSC derived chondrocytes

◢ SRX6039039: iPSC derived chondrocytes

◢ SRX6039040: iPSC derived chondrocytes

◣ SRX6039041: iPSC derived chondrocytes

◢ SRX6039042: iPSC derived chondrocytes

◢ SRX3584300: iPS cells

◢ SRX3584301: iPS cells

◢ SRX19662659: Ishikawa

◢ SRX19662660: Ishikawa

◢ SRX4671297: NAMEC8

◢ SRX4671298: NAMEC8

◢ SRX4671299: NAMEC8

◢ SRX014752: NB-4

◢ SRX014770: NB-4

◢ SRX17639399: NB-4

◢ SRX17639400: NB-4

◢ SRX17639401: NB-4

◢ SRX17639402: NB-4

◢ SRX8814876: Neuroblastoma

◢ SRX9607665: NTERA-2

◢ SRX9607666: NTERA-2

◢ SRX1035586: SK-N-SH

◢ SRX1035587: SK-N-SH

◢ SRX1035588: SK-N-SH

◢ SRX1035589: SK-N-SH

◢ SRX4671312: SUM 159PT

◢ SRX4671313: SUM 159PT

◢ SRX4671314: SUM 159PT

◢ SRX19662634: T-47D

◢ SRX19662636: T-47D

◢ SRX682379: TSU-1621MT

◢ SRX014781: UPR9

◢ SRX014782: UPR9

◢ RARA: STRING

ZNF335
RABL2B
PSMD1
RABL2A
TAOK3
SUDS3
POLR3F
DZANK1
DYNC1LI2
PSMG2
CEP76
MAPKAPK5
NME6
CACTIN
IPO13
NVL
ZNF503
TBCK
AIMP1
DUX4
RWDD1
HADHB
HADHA
RPL21
S1PR4
NCLN
VTI1B
FAM187A
EFTUD2
CCDC103
NUP85
SRD5A1
FRG2C
ID2
SLC35B1
NUP205
POLR2E
GPX4
STAM
HSPA9
EXOSC5
BCKDHA
TSNAX
MRPS7
MIF4GD
GGA3
HOXA1
HOXA2
REXO1
STAM2
DCTN1
VDAC2
S100A10
UPF2
SKP1
LYRM4
FARS2
ATP5MG
GOLGA5
SMC2
BBS9
COMMD1
CCT4
FARSB
C19orf48
SUPV3L1
PAK1IP1
C6orf52
GOSR2
PSMD12
NNAT
BLCAP
RPS23
ATP6AP1L
SOAT2
IGFBP6
DPH6
VARS1
DAPL1
PES1
NDUFA4
SEC61B
ALG2
ZNF576
IRGQ
TTC8
ZRANB2
TSN
SELENOF
HS2ST1
PDE6B
TMED1
MRPS5
PNO1
TM9SF1
IPO4
TSSK4
COX7A2L
PKDCC
RBKS
BABAM2
SFI1
EIF4ENIF1
ANAPC7
USP1
RPL35A
IQCG
LMLN
RBBP5
RARB
IL23R
LYPD1
CAPRIN1
PI4KB
SART3
ISCU
ICE1
PDAP1
BUD31
RABGGTB
RPS27A
CLHC1
ADK
AP3M1
FAM104A
C17orf80
PROSER1
NHLRC3
DNAJB7
XPNPEP3
ST13
NFIA
PPP1R1B
ACTR10
FRG2
PDE12
RBPJ
CDC42EP3
SYBU
ZFHX3
PIP4P1
OSGEP
APEX1
LOC102724770
DGCR6
SCNN1A
LTBR
VIP
NEO1
RPS12
SLC22A2
HSPA1B
LRRN4
PTGES2
C6orf47
APOM
BAG6
UFM1
CBX4
C12orf50
C12orf29
PTK2B
ZNF608
CLGN
MAGEA11
PCBP1
CCNDBP1
NR2F1
CREB5
NSUN6
ARL5B
OPA3
PAF1
CYP26A1
VANGL2
CITED2
SF3B3
COG4
DIAPH3
RBMS3
LARP7
GABRB2
KCNIP4
LAMA3
FOXP2
EIF2S3
ST18
TLE2
TAAR2
EPHA8
ZFHX4
HOXB1
METTL24
PAH
ASCL1
PXDNL
HEXIM2
ZGPAT
ARFRP1
TMCC1
MRTO4
EMC1
KCNN4
CECR2
HBD
HBB
GADD45GIP1
PIN4
MBD2
ARHGEF38
ZNF407
SIRT4
NFKBIL1
DDX39B
ATP6V1G2
SUCLG1
GATA4
ZNF652
SLC30A4
OR6B2
NDUFA10
MSX2
USP29
BARHL2
TTI2
TPM1
CPB1
IL12RB2
PDK1
MYRIP
SYNE2
CLECL1
CXXC4
POP5
CCDC200
HOXA3
HOXA4
HOXA5
LHFPL2
TNRC18
METTL3
SALL2
RBFOX1
STON1-GTF2A1L
TMEM9
CABIN1
ARHGAP11A-SCG5
ARHGAP11A
CA5A
BANP
HMX2
BUB3
LAMB1
HAPLN1
CCDC33
OTUD7B
TMEM106B
SEMA3E
SHOX2
RSRC1
HEY2
LMOD1
MYO1B
SCMH1
CNR1
HMGCS2
TMEM107
TBX2
KAT6B
BNIP3
MET
USP44
RARA
ARHGEF10L
STIL
RPS29
LRR1
CDS1
MAPK10
OAZ3
MRPL9
MKRN2OS
MKRN2
HES1
PRUNE2
ELF3
PDHX
APIP
HCAR3
HCAR2
CACYBP
STK36
RNF25
SMAGP
ZNF746
NEBL
SEC11C
SPAG17
PALM2AKAP2
KDM3A
ST7
RPN1
SHMT2
EFNB2
RPL7
RDH10
FOXP1
EIF3D
BHLHE40
LIN28A
CDC73
BAMBI
USP6NL
DNHD1
DMBX1
TYRO3
TBC1D9
CNPY2
SYNJ2
CCDC59
GABRA6
TMC7
ZBTB25
ZBTB1
GFRA1
ZNF585B
ZNF383
TXNRD1
TMEM70
ELOC
LCLAT1
EVX2
SCML4
SPRY1
TAF9
RAD17
AK6
NDUFS7
CLNK
ACKR3
CCDC174
FMN1
RPS24
POLR3A
MACROD2
ACOT2
OSGIN2
TNK2
GPR108
TRIP10
FREM2
SLC25A53
FAM199X
SPIN1
KLHL13
DAOA
PCBD2
TCP10L
MVB12A
BST2
REC8
ZNF367
GTF3C4
DDX31
ZNF827
LARGE1
ABLIM3
ZADH2
TSHZ1
NDUFB3
FAM126B
TCF7
LRRFIP2
FRRS1
RABGAP1L
ABI2
USP17L21
USP17L20
USP17L12
USP17L22
AGO1
RPS10-NUDT3
RPS10
TMEM242
OTX1
SLC25A6
DDAH1
CCN1
ZBTB40
CHODL
LYPD6B
ACSS3
ATP1B1
MNT
EPM2A
IL20
MEOX1
USP17L13
USP17L11
USP17L18
USP17L10
PCDH15
GTDC1
ARHGEF3
ELOVL5
KIF16B
GRHL1
GORAB
LYN
PLD5
TBX3
CFAP69
SNCG
MMRN2
CDH18
KRT18
MTRNR2L1
ERFL
PDZRN3
TCF4
COMMD10
BCAS1
MGP
SKIL
ANGPT1
RAB11FIP1
ESRRG
METRN
ANTKMT
RIN2
TNFRSF19
ANK3
PTCH1
ITGAV
KDM2B
MYZAP
GCOM1
PKIG
ZNF157
RUNX1T1
GARRE1
ALKBH5
MGST1
ABCB4
SSPN
CADM3
KRTAP23-1
ANKRD6
PDE4DIP
CPE
ARSF
DIPK1A
TNFSF15
SLITRK6
DNAJB1
GOLIM4
ATOH1
MMD
FGD3
ERRFI1
MAB21L2
MIER1
DNAI4
CBWD5
CBWD3
RGS8
ZNF507
CCL28
BTNL9
STX19
BDP1
EMX2
RARG
ZNF395
NT5C2
GEMIN2
CS
RBM20
OAS1
COL21A1
ARHGAP17
AGER
PBX2
GPSM3
SCAMP2
EOMES
FGD4
TMPRSS11F
RPEL1
ETFBKMT
ATXN2
EYA1
SYNJ2BP-COX16
SYNJ2BP
YTHDF2
MECOM
CSNK1A1
C6orf163
C1orf105
PIGC
IPMK
CISD1
ARID3C
DCTN3
CLCN3
NEK1
CLDN14
SNAPC1
SMUG1
BCAT2
IGF2BP3
CACNB2
POU2F1
BEND7
IL17B
ATP13A3
ANK1
BUB1B
SPCS1
GLT8D1
SERTAD2
NDST3
GGA1
LRRTM4
NLGN1
USP34
SF3B1
SLC19A3
ASXL3
GBX1
ARAP2
SIGLEC15
ID1
HOXC4
MRPL34
DDA1
ABHD8
HOXC6
HOXC8
NXPH4
PDCL3
PRR13
UNKL
C16orf91
TACC1
TMEM270
SNX1
CIAO2A
EVX1
METTL27
VPS33B
ERP27
KDM6B
COL23A1
IFI16
PYDC5
TEX2
UBE2I
DMAC1
NEFH
PLCH1
FAM118A
PRKD1
ARHGAP10
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
INKA2
CEP70
DIO2
USP17L17
RASSF6
USP17L15
SMIM32
NRXN1
PSMB5
ELOVL6
LIX1
HUS1
PEX14
DFFA
ITGB8
IMMP1L
ELP4
MLIP
SLC6A4
ADM
BFSP1
RPP25
DSTN
SYTL1
CRYBG1
ZNF697
PPP1R12B
KRT39
THRA
AFAP1
LOC389199
KAT6A
USP17L19
TMSB4Y
DUSP9
SMURF1
RPLP1
CBWD6
ATXN1L
DENR
FXYD6-FXYD2
FXYD6
KLF5
SLC35F2
SALL3
DONSON
KCNN2
AHSP
NMD3
DHRS3
PDE4D
SRSF11
LRRC40
PXYLP1
TIGD1
EIF4E2
CNNM1
HNRNPA2B1
CBX3
SORBS2
SEMA6D
MOG
BOD1L2
SEPTIN2
HDLBP
SND1
PLEKHG1
B3GNT5
ABAT
LOC102723360
NCBP3
MYLK3
JAKMIP1
DOCK9
UXS1
PDHB
ASB6
FYB2
THAP12
GVQW3
MEIS2
GADD45A
CNTN4
NTAN1
C2CD5
CRABP2
ID3
HAND1
LMO4
PCLAF
TRIP4
UBL4B
SERHL2
TLE4
TLE3
ECEL1
HSPA4L
LBR
GJA10
TSPAN3
EXOC2
H2BC5
H1-4
MCU
ATG4C
FAM240A
SOX5
MEGF6
MYPN
SELENOS
SRPRB
RAX
SKIDA1
RCOR3
RAI14
SPATC1L
ARHGAP12
NEUROG1
RIMS1
LMO1
RALB
SH2B1
SEH1L
CTF1
BCL7C
VSIR
ARF1
URM1
RPL22
RNF207
TNS3
SAR1B
MGST2
SLC22A5
KANK1
ANXA11
NKX2-6
ACOT1
EAPP
EBAG9
MAGEB3
TMPPE
GLB1
MAGEB2
DLAT
ATG10
KRTAP9-7
PKN2
CTNNB1
NBEA
MAB21L1
GNG2
ANP32C
CALM2
HNRNPD
PHB2
BICRA
SHB
NR2C1
ZBED9
CABCOCO1
CHRNA9
MRPL52
SLC7A7
FAT2
LYPD6
SUSD4
SMIM28
KMT2E
ERICH5
MFSD4A
DOT1L
AP3D1
MSS51
PRDM10
POGLUT3
COLEC12
TPRA1
MCM2
AKIRIN1
GPRC5A
DAG1
HIP1
OTOL1
TAF12
CLDN9
CLDN6
ADAMTSL4
THOC6
HCFC1R1
TNFRSF12A
PARD3B
PRKAG2
MELTF
GPC3
SIGIRR
KLRC3
AKAP9
GRHL2
PRTG
DIP2C
KMT2A
FAAP24
CEP89
SOX6
PHIP
AMBN
APLN
SLC2A9
STK38
OTUD4
LCA5
YAP1
HMCN2
LDHB
OR51T1
ZSWIM1
SPATA25
NEURL2
CTSA
ABHD12
PHACTR2
GINS1
RTL1
BCAP29
BRINP1
TRIM55
ASPA
TCHP
TSSC4
PCLO
SSBP2
JMJD1C
HPDL
DERA
TFAP2A
SULF1
STOM
CRHR2
CACNG1
SMARCD2
LPCAT3
HECTD4
SLC35E2A
SLAMF8
BNC2
TAF1A
ELAPOR2
TAMALIN
SOX14
EFEMP1
SLC3A2
FDFT1
ARL6IP5
UBA3
TMTC3
CEP290
CA12
TMPRSS12
KANSL3
FER1L5
MACROH2A1
PPFIBP1
ADGRL2
CALCRL
SFRP2
RPA4
CHN2
CPVL
COX5A
POLR2J3
RAPGEF3
SLC48A1
PRIM1
ACY3
GPR37
PANK2
C9orf92
RCOR1
ZSCAN30
EMP3
CMTR1
PRAC2
HOXB13
CDK20
PRAC1
RNF111
NR2C2
ETV1
TFAP2B
TMEM207
DACT2
RGS5
NANOGP8
MEIS1
CCDC177
NSUN7
SYTL3
DYNLT1
REL
HGH1
LY6G5C
EID2B
EID2
RYR2
DLG2
ACYP1
ZC2HC1C
ANAPC15
SSRP1
P2RX3
INSIG2
TMPRSS7
TRIM16L
RNASE9
URGCP
CCDC102A
OTP
ADGRG5
URGCP-MRPS24
ZKSCAN2
MINDY2
NR4A2
WDR26
PLCL2
FRMD7
ZBTB7C
SECISBP2L
PRXL2A
ARSB
AP1B1
MACF1
RILPL1
EML5
STATH
GCG
PPP2R5A
CIPC
JCAD
FMO1
TFAP2D
QPRT
CRYAA2
CRYAA
NAGLU
EIF4H
TRIM24
PEX2
FNDC5
ZDHHC17
IQSEC2
RBP2
BRWD1
ZBTB17
VEZF1
POFUT2
MPDZ
GIGYF1
KCNS3
NFE2
MYADM
PARP9
DTX3L
UFSP1
ACHE
FGD5
NEUROG2
MUC20
IFT52
UBE2V2
EVL
UQCC2
TAAR1
CLK1
SALL4
BNIP2
GAB2
NCOA7
TUBB
MDC1
EHF
PKNOX2
SFXN3
PDZD7
SKAP2
IQCB1
EAF2
EDNRB
MYO6
ING1
CARS2
ATXN7
ZNF385B
GBP1
STARD13
CDK6
ZNF397
DNAJA2
PPARGC1A
TRAPPC6B
PNN
CD74
POF1B
PALLD
GTF2H5
PRKRA
PJVK
INF2
CPA2
SPTSSB
USP28
MYH8
MTF2
BDNF
DZIP3
CIP2A
SRSF10
CABLES1
CADPS
BLM
BZW2
DSC2
ACBD6
CSDC2
PKD2L2
RGS2
TLN1
CREB3